Pregenerated sensors for LINC02795 (Homo sapiens)
Ensembl gene IDs: ENSG00000285210Ensembl transcript IDs: ENST00000643804.1, ENST00000645733.1, ENST00000647509.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTTGTTGATCTGCGAAGAGTATGGGAGCTGCCCATAGTGCTCTGCTaGCTCGTCTCTCTGGATCATGCCACGGTGGGCTTGGGCCATGCC | + |
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Preference number: 5 (lower is better) Translates to: LVDLRRVWELPIVLC*LVSLDHATVGLGHA Trigger: GGCATGGCCCAAGCCCACCGTGGCATGATCCAGAGAGACGAGTCAGCAGAGCACTATGGGCAGCTCCCATACTCTTCGCAGATCAACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS CCA 90 bp | ATCAGCAAGAGCGCTAATTCCCTGCTTCCTGTAAAGCAGCTGCAGTaGGGTTCCAGCGGCATCAGGGGCACAATGACTGTGGGCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ISKSANSLLPVKQLQ*GSSGIRGTMTVGSG Trigger: CCCAGAGCCCACAGTCATTGTGCCCCTGATGCCGCTGGAACCCCACTGCAGCTGCTTTACAGGAAGCAGGGAATTAGCGCTCTTGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS GCA 90 bp | CTGAGCCCTGGACATCTGCTCAGGCAACATGGTTCAGACAGTAGATaGAGTAGCAGGTACCCCAACAACCTCAGTGGGACAGTTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: LSPGHLLRQHGSDSR*SSRYPNNLSGTVSL Trigger: TAGGGAAACTGTCCCACTGAGGTTGTTGGGGTACCTGCTACTGCATCTACTGTCTGAACCATGTTGCCTGAGCAGATGTCCAGGGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 90 bp | AGCTCTGATAAACATGGTGGCAGCAGTAACAGCAGCAGGCAAGCCTaGGCCCTGGACATCTGCTCAGGCAACATGGTTCAGACAGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SSDKHGGSSNSSRQA*ALDICSGNMVQTVD Trigger: ATCTACTGTCTGAACCATGTTGCCTGAGCAGATGTCCAGGGCTCAGGCTTGCCTGCTGCTGTTACTGCTGCCACCATGTTTATCAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS GCA 90 bp | GTGGGCTTGGGCCATGCCAGCGGAGACCCTGACTGTAGTTCTCTTTaGTTTCTCGCATTCACATCTCCTGTAAAGATGCTTTGTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VGLGHASGDPDCSSL*FLAFTSPVKMLCFS Trigger: ACTGAAACAAAGCATCTTTACAGGAGATGTGAATGCGAGAAAGCAAAGAGAACTACAGTCAGGGTCTCCGCTGGCATGGCCCAAGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS GCA 90 bp | CCAGTTCCACCCTATGCTTTCCCCCTATTGCAGGGAAGCAGAATCTaGTTACACCAGAGTCTTTTCCAAACCTTCCTTTCAGCTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVPPYAFPLLQGSRI*LHQSLFQTFLSAVS Trigger: AGAGACAGCTGAAAGGAAGGTTTGGAAAAGACTCTGGTGTAAGCAGATTCTGCTTCCCTGCAATAGGGGGAAAGCATAGGGTGGAACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS GCA 90 bp | GTGATTAGCTCTCAGCTCCAGTTCCACCCTATGCTTTCCCCCTATTaGAGGGAAGCAGAATCTGCTTACACCAGAGTCTTTTCCAAACCT | + |
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Preference number: 5 (lower is better) Translates to: VISSQLQFHPMLSPY*REAESAYTRVFSKP Trigger: AGGTTTGGAAAAGACTCTGGTGTAAGCAGATTCTGCTTCCCTGCAATAGGGGGAAAGCATAGGGTGGAACTGGAGCTGAGAGCTAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 90 bp | CAGCCAGTTTTCTGTCCTACATTCTGTCTGTTGATTCTGATTGCCTaGGGAGACACTGACAGAGTTGGCTATGCCTGCAGAATACGGATG | + |
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Preference number: 5 (lower is better) Translates to: QPVFCPTFCLLILIA*GDTDRVGYACRIRM Trigger: CATCCGTATTCTGCAGGCATAGCCAACTCTGTCAGTGTCTCCTCAGGCAATCAGAATCAACAGACAGAATGTAGGACAGAAAACTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 90 bp | ACAGCATCACTATTATCTATCTCCCTGGGTTATATGCTGGCTTGTTaGTCTGCGAAGAGTATGGGAGCTGCCCATAGTGCTCTGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: TASLLSISLGYMLAC*SAKSMGAAHSALLT Trigger: AGTCAGCAGAGCACTATGGGCAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAGTGATGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS GCA 90 bp | CTCTACAGAGCACAGCATCACTATTATCTATCTCCCTGGGTTATATaGTGGCTTGTTGATCTGCGAAGAGTATGGGAGCTGCCCATAGTG | + |
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Preference number: 5 (lower is better) Translates to: LYRAQHHYYLSPWVI*WLVDLRRVWELPIV Trigger: CACTATGGGCAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAGTGATGCTGTGCTCTGTAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000645733.1 ENST00000647509.1 |
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| CDS CCA 90 bp | TACAGAGCACAGCATCACTATTATCTATCTCCCTGGGTTATATGCTaGCTTGTTGATCTGCGAAGAGTATGGGAGCTGCCCATAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: YRAQHHYYLSPWVIC*LVDLRRVWELPIVL Trigger: GAGCACTATGGGCAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAGTGATGCTGTGCTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000645733.1 ENST00000647509.1 |
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| CDS TCA 90 bp | CTGTCCTACATTCTGTCTGTTGATTCTGATTGCCTGAGGAGACACTaGCAGAGTTGGCTATGCCTGCAGAATACGGATGACAGATGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LSYILSVDSDCLRRH*QSWLCLQNTDDRCV Trigger: AACACATCTGTCATCCGTATTCTGCAGGCATAGCCAACTCTGTCAGTGTCTCCTCAGGCAATCAGAATCAACAGACAGAATGTAGGACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 90 bp | GACAGTGAGAGACGCTGTCTCATGGAGTCAGTGATGATTACATGGTaGCTGCATTCATTATCCTTGAATAACATGATTATTTACGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: DSERRCLMESVMITW*LHSLSLNNMIIYVG Trigger: CCCCACGTAAATAATCATGTTATTCAAGGATAATGAATGCAGCCACCATGTAATCATCACTGACTCCATGAGACAGCGTCTCTCACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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| CDS CCA 90 bp | GGTGACAGTGAGAGACGCTGTCTCATGGAGTCAGTGATGATTACATaGTGGCTGCATTCATTATCCTTGAATAACATGATTATTTACGTG | + |
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Preference number: 5 (lower is better) Translates to: GDSERRCLMESVMIT*WLHSLSLNNMIIYV Trigger: CACGTAAATAATCATGTTATTCAAGGATAATGAATGCAGCCACCATGTAATCATCACTGACTCCATGAGACAGCGTCTCTCACTGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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| CDS TCA 90 bp | AAAGATGCTTTGTTTCAGTCTGTTGGAGTGTTCATTTGCTCTCACTaGATGGATGATTTCTTCTTTAGGAGTTCCACCAGATGCTCACTA | + |
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Preference number: 5 (lower is better) Translates to: KDALFQSVGVFICSH*MDDFFFRSSTRCSL Trigger: TAGTGAGCATCTGGTGGAACTCCTAAAGAAGAAATCATCCATTCAGTGAGAGCAAATGAACACTCCAACAGACTGAAACAAAGCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647509.1 |
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| CDS CCA 90 bp | ATGCTTTGTTTCAGTCTGTTGGAGTGTTCATTTGCTCTCACTGAATaGATGATTTCTTCTTTAGGAGTTCCTTTGTTGCTCCATCATCAG | + |
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Preference number: 5 (lower is better) Translates to: MLCFSLLECSFALTE*MISSLGVPLLLHHQ Trigger: CTGATGATGGAGCAACAAAGGAACTCCTAAAGAAGAAATCATCCATTCAGTGAGAGCAAATGAACACTCCAACAGACTGAAACAAAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 90 bp | AAAGATGCTTTGTTTCAGTCTGTTGGAGTGTTCATTTGCTCTCACTaGATGGATGATTTCTTCTTTAGGAGTTCCTTTGTTGCTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: KDALFQSVGVFICSH*MDDFFFRSSFVAPS Trigger: TGATGGAGCAACAAAGGAACTCCTAAAGAAGAAATCATCCATTCAGTGAGAGCAAATGAACACTCCAACAGACTGAAACAAAGCATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 90 bp | TTTCTTCATATCAATAGCCAACATCCTGTCATGAAAATATTCATCTaGATTCACCTAAGTCCTTCTGAATATACGTTTTCCTCCTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: FLHINSQHPVMKIFI*IHLSPSEYTFSSSH Trigger: GTGAGAGGAGGAAAACGTATATTCAGAAGGACTTAGGTGAATCCAGATGAATATTTTCATGACAGGATGTTGGCTATTGATATGAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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| CDS GCA 72 bp | GCCCATAGTGCTCTGCTGACTCGTCTCTCTGGATCATaGCACGGTGGGCTTGGGCCATGCCAGCGGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: AHSALLTRLSGS*HGGLGPCQRRP Trigger: GGGTCTCCGCTGGCATGGCCCAAGCCCACCGTGGCATGATCCAGAGAGACGAGTCAGCAGAGCACTATGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS CCA 72 bp | TGCTCTGCTGACTCGTCTCTCTGGATCATGCCACGGTaGGCTTGGGCCATGCCAGCGGAGACCCTGACTGTA | + |
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Preference number: 6 (lower is better) Translates to: CSADSSLWIMPR*AWAMPAETLTV Trigger: TACAGTCAGGGTCTCCGCTGGCATGGCCCAAGCCCACCGTGGCATGATCCAGAGAGACGAGTCAGCAGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS TCA 72 bp | AGCTGCAGTGGGGTTCCAGCGGCATCAGGGGCACAATaGCTGTGGGCTCTGGGTAGCAGCATCTTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCSGVPAASGAQ*LWALGSSIFLS Trigger: AGAAAGGAAGATGCTGCTACCCAGAGCCCACAGTCATTGTGCCCCTGATGCCGCTGGAACCCCACTGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 72 bp | CTGCGAAGAGTATGGGAGCTGCCCATAGTGCTCTGCTaGCTCGTCTCTCTGGATCATGCCACGGTGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRRVWELPIVLC*LVSLDHATVGL Trigger: CAAGCCCACCGTGGCATGATCCAGAGAGACGAGTCAGCAGAGCACTATGGGCAGCTCCCATACTCTTCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS CCA 72 bp | TTCCAGCGGCATCAGGGGCACAATGACTGTGGGCTCTaGGTAGCAGCATCTTCCTTTCTGCTTCTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: FQRHQGHNDCGL*VAASSFLLLLH Trigger: GTGCAGGAGAAGCAGAAAGGAAGATGCTGCTACCCAGAGCCCACAGTCATTGTGCCCCTGATGCCGCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | AGCGCTAATTCCCTGCTTCCTGTAAAGCAGCTGCAGTaGGGTTCCAGCGGCATCAGGGGCACAATGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SANSLLPVKQLQ*GSSGIRGTMTV Trigger: CACAGTCATTGTGCCCCTGATGCCGCTGGAACCCCACTGCAGCTGCTTTACAGGAAGCAGGGAATTAGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 72 bp | AAACATGGTGGCAGCAGTAACAGCAGCAGGCAAGCCTaGGCCCTGGACATCTGCTCAGGCAACATGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: KHGGSSNSSRQA*ALDICSGNMVQ Trigger: CTGAACCATGTTGCCTGAGCAGATGTCCAGGGCTCAGGCTTGCCTGCTGCTGTTACTGCTGCCACCATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS GCA 72 bp | GGACATCTGCTCAGGCAACATGGTTCAGACAGTAGATaGAGTAGCAGGTACCCCAACAACCTCAGTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: GHLLRQHGSDSR*SSRYPNNLSGT Trigger: TGTCCCACTGAGGTTGTTGGGGTACCTGCTACTGCATCTACTGTCTGAACCATGTTGCCTGAGCAGATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | CTGCAACAGGGACAGCGGCTGATGACTTTTGGATCCTaGATACCTGTAGCATCAGCAAGAGCGCTAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: LQQGQRLMTFGS*IPVASARALIP Trigger: GGGAATTAGCGCTCTTGCTGATGCTACAGGTATCCAGGATCCAAAAGTCATCAGCCGCTGTCCCTGTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CAA 72 bp | CTCTCAGCTCCAGTTCCACCCTATGCTTTCCCCCTATaGCAGGGAAGCAGAATCTGCTTACACCAGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSAPVPPYAFPL*QGSRICLHQSL Trigger: AAGACTCTGGTGTAAGCAGATTCTGCTTCCCTGCAATAGGGGGAAAGCATAGGGTGGAACTGGAGCTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS GCA 72 bp | TCTCAGCTCCAGTTCCACCCTATGCTTTCCCCCTATTaGAGGGAAGCAGAATCTGCTTACACCAGAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SQLQFHPMLSPY*REAESAYTRVF Trigger: AAAGACTCTGGTGTAAGCAGATTCTGCTTCCCTGCAATAGGGGGAAAGCATAGGGTGGAACTGGAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | AAGCAAGGACAGTGTTCCCTTTGCCAGCTCAGTGACTaGATCTCTAATATCCCCAAAGACTCCAAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: KQGQCSLCQLSD*ISNIPKDSKPQ Trigger: CTGTGGCTTGGAGTCTTTGGGGATATTAGAGATCCAGTCACTGAGCTGGCAAAGGGAACACTGTCCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CAA 72 bp | CTTCCCTCTTTCGCTCCTCCAGCCCTTCCAACATGTTaGCAGCCAGTTTTCTGTCCTACATTCTGTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSFAPPALPTC*QPVFCPTFCLL Trigger: CAACAGACAGAATGTAGGACAGAAAACTGGCTGCAAACATGTTGGAAGGGCTGGAGGAGCGAAAGAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | CAGCATCACTATTATCTATCTCCCTGGGTTATATGCTaGCTTGTTGATCTGCGAAGAGTATGGGAGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QHHYYLSPWVIC*LVDLRRVWELP Trigger: GGGCAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAGTGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS TCA 72 bp | ATTCTGTCTGTTGATTCTGATTGCCTGAGGAGACACTaGCAGAGTTGGCTATGCCTGCAGAATACGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: ILSVDSDCLRRH*QSWLCLQNTDD Trigger: GTCATCCGTATTCTGCAGGCATAGCCAACTCTGTCAGTGTCTCCTCAGGCAATCAGAATCAACAGACAGAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 72 bp | CTATTATCTATCTCCCTGGGTTATATGCTGGCTTGTTaGTCTGCGAAGAGTATGGGAGCTGCCCATAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLSISLGYMLAC*SAKSMGAAHSA Trigger: AGCACTATGGGCAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS GCA 72 bp | GCACAGCATCACTATTATCTATCTCCCTGGGTTATATaGTGGCTTGTTGATCTGCGAAGAGTATGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AQHHYYLSPWVI*WLVDLRRVWEL Trigger: CAGCTCCCATACTCTTCGCAGATCAACAAGCCAGCATATAACCCAGGGAGATAGATAATAGTGATGCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS TCA 72 bp | CTTGAAGAGGAGGGAGATGAAAATTCCCACACAAGCTaGACCTGCAAACTAAAGCTTCGAAGAAAAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEEEGDENSHTS*TCKLKLRRKGE Trigger: TTCTCCTTTTCTTCGAAGCTTTAGTTTGCAGGTTCAGCTTGTGTGGGAATTTTCATCTCCCTCCTCTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | GAGAGACGCTGTCTCATGGAGTCAGTGATGATTACATaGTGGCTGCATTCATTATCCTTGAATAACATGATT | + |
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Preference number: 6 (lower is better) Translates to: ERRCLMESVMIT*WLHSLSLNNMI Trigger: AATCATGTTATTCAAGGATAATGAATGCAGCCACCATGTAATCATCACTGACTCCATGAGACAGCGTCTCTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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| CDS CAA 72 bp | CAAATCCCAGTTCTCCCAGCTTCTATCAGTATAGCATaGGGCAGATTTCTTAATCACTCTCTGACTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QIPVLPASISIA*GRFLNHSLTLF Trigger: AAAAAGAGTCAGAGAGTGATTAAGAAATCTGCCCAATGCTATACTGATAGAAGCTGGGAGAACTGGGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS TCA 72 bp | TCATTATCCTTGAATAACATGATTATTTACGTGGGGTaGCAGAGCAAAGCGTTCTTCATAAAGCTGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLSLNNMIIYVG*QSKAFFIKLEA Trigger: TGCTTCCAGCTTTATGAAGAACGCTTTGCTCTGTCACCCCACGTAAATAATCATGTTATTCAAGGATAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643804.1 ENST00000645733.1 |
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| CDS CCA 72 bp | TCTTTTCTCATGGCCATGGAGTCAGTGATGATTACATaGTGGCTGCATTCATTATCCTTGAATAACATGATT | + |
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Preference number: 6 (lower is better) Translates to: SFLMAMESVMIT*WLHSLSLNNMI Trigger: AATCATGTTATTCAAGGATAATGAATGCAGCCACCATGTAATCATCACTGACTCCATGGCCATGAGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643804.1 |
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| CDS CAA 90 bp | TTTCTCGCATTCACATCTCCTGTAAAGATGCTTTGTTTCAGTCTGTaGGAGTGTTCATTTGCTCTCACTGAATGGATGATTTCTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: FLAFTSPVKMLCFSL*ECSFALTEWMISSL Trigger: TAAAGAAGAAATCATCCATTCAGTGAGAGCAAATGAACACTCCAACAGACTGAAACAAAGCATCTTTACAGGAGATGTGAATGCGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643804.1 ENST00000645733.1 ENST00000647509.1 |
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| CDS CCA 72 bp | ATCAATAGCCAACATCCTGTCATGAAAATATTCATCTaGATTCACCTAAGTCCTTCTGAATATACGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: INSQHPVMKIFI*IHLSPSEYTFS Trigger: GGAAAACGTATATTCAGAAGGACTTAGGTGAATCCAGATGAATATTTTCATGACAGGATGTTGGCTATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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| CDS CAA 72 bp | TATTGCCAAATTTGTGATTTCTACAGTATTACAGGGTaGCAAAGCTTCTTGGAAGATAAACTAGACTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: YCQICDFYSITG*QSFLEDKLDSS Trigger: AGAGGAGTCTAGTTTATCTTCCAAGAAGCTTTGCAACCCTGTAATACTGTAGAAATCACAAATTTGGCAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645733.1 |
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