Pregenerated sensors for LINC02794 (Homo sapiens)
Ensembl gene IDs: ENSG00000226133Ensembl transcript IDs: ENST00000439795.1, ENST00000456803.5, ENST00000635446.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGAGCAGGCTTTGGGTGCTGTCTCCATCTCTCCCCAGTTTCTCGTaGGAGGAGGAAGCAGATGAGTTCTGGTGGCCAGAGAGAACTAGG | + |
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Preference number: 5 (lower is better) Translates to: KSRLWVLSPSLPSFS*EEEADEFWWPERTR Trigger: CCTAGTTCTCTCTGGCCACCAGAACTCATCTGCTTCCTCCTCCCACGAGAAACTGGGGAGAGATGGAGACAGCACCCAAAGCCTGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 90 bp | TCTCTCCCCAGTTTCTCGTGGGAGGAGGAAGCAGATGAGTTCTGGTaGCCAGAGAGAACTAGGACCAACAGGGGCTGTAAGGCTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPSFSWEEEADEFW*PERTRTNRGCKAGK Trigger: CTTTCCAGCCTTACAGCCCCTGTTGGTCCTAGTTCTCTCTGGCCACCAGAACTCATCTGCTTCCTCCTCCCACGAGAAACTGGGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 90 bp | GGAGATGGGGCTTGGCCAAGCCAAGGTAGCCCAGCAATGGCACGATaGAAAGCCCAGTTGAGAGGAAACAGCTTAAAGAAGAGCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GDGAWPSQGSPAMAR*KAQLRGNSLKKSRL Trigger: AAGCCTGCTCTTCTTTAAGCTGTTTCCTCTCAACTGGGCTTTCCATCGTGCCATTGCTGGGCTACCTTGGCTTGGCCAAGCCCCATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 90 bp | TTTGCTTCTTCTGGTATTCACACTGCGACAATAGGAGATGGGGCTTaGCCAAGCCAAGGTAGCCCAGCAATGGCACGATGGAAAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: FASSGIHTATIGDGA*PSQGSPAMARWKAQ Trigger: CTGGGCTTTCCATCGTGCCATTGCTGGGCTACCTTGGCTTGGCCAAGCCCCATCTCCTATTGTCGCAGTGTGAATACCAGAAGAAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS GCA 90 bp | GACAGGCTGAGCTGTGGGTGGTCAGGAATGTTTCAGGACTTCCTGTaGCCAGTGTTCCAAGTCGGAGTGTCTAGATTAATGATCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: DRLSCGWSGMFQDFL*PVFQVGVSRLMIHL Trigger: GAGATGGATCATTAATCTAGACACTCCGACTTGGAACACTGGGCACAGGAAGTCCTGAAACATTCCTGACCACCCACAGCTCAGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439795.1 |
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| CDS GCA 90 bp | GCCACCCTGCTCCCAGCTCAATCCTCTGAGCCATCTCCACACCTTTaGCAGAATGATTGTTACAACGGATCTCATCAGTCATTCAATAGC | + |
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Preference number: 5 (lower is better) Translates to: ATLLPAQSSEPSPHL*QNDCYNGSHQSFNS Trigger: GCTATTGAATGACTGATGAGATCCGTTGTAACAATCATTCTGGCAAAGGTGTGGAGATGGCTCAGAGGATTGAGCTGGGAGCAGGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439795.1 ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 90 bp | GAGAGAACTAGGACCAACAGGGGCTGTAAGGCTGGAAAGTTAAGCTaGAATTCCATCAGAAAGACCCCTAAATGGCAGGCCAAGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: ERTRTNRGCKAGKLS*NSIRKTPKWQAKVE Trigger: TTCTACCTTGGCCTGCCATTTAGGGGTCTTTCTGATGGAATTCCAGCTTAACTTTCCAGCCTTACAGCCCCTGTTGGTCCTAGTTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 90 bp | AAGGCTGGAAAGTTAAGCTGGAATTCCATCAGAAAGACCCCTAAATaGCAGGCCAAGGTAGAAAGGCGTTACTGTCTAGGCAGGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: KAGKLSWNSIRKTPK*QAKVERRYCLGRFE Trigger: CTCAAACCTGCCTAGACAGTAACGCCTTTCTACCTTGGCCTGCCATTTAGGGGTCTTTCTGATGGAATTCCAGCTTAACTTTCCAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 90 bp | TCTCTGACATATAATTCTCCATTCGCCCTCTTTTTCTTCATCTGCTaGTTGAATGATCCAAGAAGGCCCCTGCTCAGAGCCATGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLTYNSPFALFFFIC*LNDPRRPLLRAMVA Trigger: TGCTACCATGGCTCTGAGCAGGGGCCTTCTTGGATCATTCAACCAGCAGATGAAGAAAAAGAGGGCGAATGGAGAATTATATGTCAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS GCA 90 bp | AATTCTCTGACATATAATTCTCCATTCGCCCTCTTTTTCTTCATCTaGTGGTTGAATGATCCAAGAAGGCCCCTGCTCAGAGCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: NSLTYNSPFALFFFI*WLNDPRRPLLRAMV Trigger: TACCATGGCTCTGAGCAGGGGCCTTCTTGGATCATTCAACCAGCAGATGAAGAAAAAGAGGGCGAATGGAGAATTATATGTCAGAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 90 bp | GTTGCTCCACCATGCTTCCAGACATCAGAAATCTATGGTAAGAATTaGATGCCAGGAGATTTGCACTTTTGCCCACAATTAAGTTACCAG | + |
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Preference number: 5 (lower is better) Translates to: VAPPCFQTSEIYGKN*MPGDLHFCPQLSYQ Trigger: CTGGTAACTTAATTGTGGGCAAAAGTGCAAATCTCCTGGCATCCAATTCTTACCATAGATTTCTGATGTCTGGAAGCATGGTGGAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CAA 90 bp | CCATTGGTGGTGGGAGTAGAGCCCCCAAAGCCTCAGCATGGCCACTaGGCAGATGACCACATCTACCCAGCCAACACTCCCACCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLVVGVEPPKPQHGH*ADDHIYPANTPTLP Trigger: AGGCAGGGTGGGAGTGTTGGCTGGGTAGATGTGGTCATCTGCCAAGTGGCCATGCTGAGGCTTTGGGGGCTCTACTCCCACCACCAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000439795.1 |
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| CDS CCA 72 bp | CCCAGTTTCTCGTGGGAGGAGGAAGCAGATGAGTTCTaGTGGCCAGAGAGAACTAGGACCAACAGGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSFSWEEEADEF*WPERTRTNRGC Trigger: ACAGCCCCTGTTGGTCCTAGTTCTCTCTGGCCACCAGAACTCATCTGCTTCCTCCTCCCACGAGAAACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS GCA 72 bp | GAATCAGACACAGTCCCTCCCTCAACAAGCTCAGTCTaGCTGCTCAGAGCCATGGTAGCACATGTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ESDTVPPSTSSV*LLRAMVAHVAE Trigger: CTCAGCCACATGTGCTACCATGGCTCTGAGCAGGCAGACTGAGCTTGTTGAGGGAGGGACTGTGTCTGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456803.5 |
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| CDS CCA 72 bp | TCTGGTATTCACACTGCGACAATAGGAGATGGGGCTTaGCCAAGCCAAGGTAGCCCAGCAATGGCACGATGG | + |
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Preference number: 6 (lower is better) Translates to: SGIHTATIGDGA*PSQGSPAMARW Trigger: CCATCGTGCCATTGCTGGGCTACCTTGGCTTGGCCAAGCCCCATCTCCTATTGTCGCAGTGTGAATACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CAA 90 bp | TGGCCAAGCCAAGGTAGCCCAGCAATGGCACGATGGAAAGCCCAGTaGAGAGGAAACAGCTTAAAGAAGAGCAGGCTTTGGGTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WPSQGSPAMARWKAQ*RGNSLKKSRLWVLS Trigger: AGACAGCACCCAAAGCCTGCTCTTCTTTAAGCTGTTTCCTCTCAACTGGGCTTTCCATCGTGCCATTGCTGGGCTACCTTGGCTTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 72 bp | ATCCGGATCAGAACTCAAGTCTCCTGCTTCCCTCTCTaGCATCTTTCCAGGGCAAGAGGCTGTCTCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IRIRTQVSCFPL*HLSRARGCLFQ Trigger: CTGAAAGAGACAGCCTCTTGCCCTGGAAAGATGCCAGAGAGGGAAGCAGGAGACTTGAGTTCTGATCCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439795.1 |
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| CDS CCA 72 bp | GCTTGGCCAAGCCAAGGTAGCCCAGCAATGGCACGATaGAAAGCCCAGTTGAGAGGAAACAGCTTAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AWPSQGSPAMAR*KAQLRGNSLKK Trigger: CTTCTTTAAGCTGTTTCCTCTCAACTGGGCTTTCCATCGTGCCATTGCTGGGCTACCTTGGCTTGGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS TCA 72 bp | TCCATTCGCCCTCTTTTTCTTCATCTGCTGGTTGAATaGTCCAAGAAGGCCCCTGCTCAGAGCCATGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SIRPLFLHLLVE*SKKAPAQSHGS Trigger: GCTACCATGGCTCTGAGCAGGGGCCTTCTTGGATCATTCAACCAGCAGATGAAGAAAAAGAGGGCGAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 72 bp | CAGTTGAGAGGAAACAGCTTAAAGAAGAGCAGGCTTTaGGTGCTGTCTCCATCTCTCCCCAGTTTCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: QLRGNSLKKSRL*VLSPSLPSFSW Trigger: CCACGAGAAACTGGGGAGAGATGGAGACAGCACCCAAAGCCTGCTCTTCTTTAAGCTGTTTCCTCTCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 72 bp | AGGACCAACAGGGGCTGTAAGGCTGGAAAGTTAAGCTaGAATTCCATCAGAAAGACCCCTAAATGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTNRGCKAGKLS*NSIRKTPKWQA Trigger: GGCCTGCCATTTAGGGGTCTTTCTGATGGAATTCCAGCTTAACTTTCCAGCCTTACAGCCCCTGTTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CAA 72 bp | AGACCAAGCCGAGGCCCTGACGCCAAGTGTGGGGCATaGATTAGACTTTACACTCTGAGCTTGCTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RPSRGPDAKCGA*IRLYTLSLLSS Trigger: AGATGAAAGCAAGCTCAGAGTGTAAAGTCTAATCAATGCCCCACACTTGGCGTCAGGGCCTCGGCTTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439795.1 |
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| CDS CAA 72 bp | CCAGTTGAGAGGAAACAGCTTAAAGAAGAGCAGGCTTaGGGTGCTGTCTCCATCTCTCCCCAGTTTCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: PVERKQLKEEQA*GAVSISPQFLV Trigger: CACGAGAAACTGGGGAGAGATGGAGACAGCACCCAAAGCCTGCTCTTCTTTAAGCTGTTTCCTCTCAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS CAA 72 bp | CAAGGTAGCCCAGCAATGGCACGATGGAAAGCCCAGTaGAGAGGAAACAGCTTAAAGAAGAGCAGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QGSPAMARWKAQ*RGNSLKKSRLW Trigger: CCAAAGCCTGCTCTTCTTTAAGCTGTTTCCTCTCAACTGGGCTTTCCATCGTGCCATTGCTGGGCTACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS GCA 72 bp | AGCTGTGGGTGGTCAGGAATGTTTCAGGACTTCCTGTaGCCAGTGTTCCAAGTCGGAGTGTCTAGATTAATG | + |
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Preference number: 6 (lower is better) Translates to: SCGWSGMFQDFL*PVFQVGVSRLM Trigger: CATTAATCTAGACACTCCGACTTGGAACACTGGGCACAGGAAGTCCTGAAACATTCCTGACCACCCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439795.1 |
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| CDS GCA 72 bp | GTCACACTTGCATCAGGGGTGAATAAGTGTCCCATCTaGAGGCTGTTTGCTTCTTCTGGTATTCACACTGCG | + |
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Preference number: 6 (lower is better) Translates to: VTLASGVNKCPI*RLFASSGIHTA Trigger: CGCAGTGTGAATACCAGAAGAAGCAAACAGCCTGCAGATGGGACACTTATTCACCCCTGATGCAAGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456803.5 ENST00000635446.1 |
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| CDS GCA 72 bp | CTCCCAGCTCAATCCTCTGAGCCATCTCCACACCTTTaGCAGAATGATTGTTACAACGGATCTCATCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LPAQSSEPSPHL*QNDCYNGSHQS Trigger: TGACTGATGAGATCCGTTGTAACAATCATTCTGGCAAAGGTGTGGAGATGGCTCAGAGGATTGAGCTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439795.1 ENST00000456803.5 ENST00000635446.1 |
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| CDS CCA 72 bp | AAGTTAAGCTGGAATTCCATCAGAAAGACCCCTAAATaGCAGGCCAAGGTAGAAAGGCGTTACTGTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: KLSWNSIRKTPK*QAKVERRYCLG Trigger: GCCTAGACAGTAACGCCTTTCTACCTTGGCCTGCCATTTAGGGGTCTTTCTGATGGAATTCCAGCTTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 72 bp | TATAATTCTCCATTCGCCCTCTTTTTCTTCATCTGCTaGTTGAATGATCCAAGAAGGCCCCTGCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: YNSPFALFFFIC*LNDPRRPLLRA Trigger: GGCTCTGAGCAGGGGCCTTCTTGGATCATTCAACCAGCAGATGAAGAAAAAGAGGGCGAATGGAGAATTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS TCA 72 bp | GGCCAAGGTAGAAAGGCGTTACTGTCTAGGCAGGTTTaGGCTTTTAAAGATCTATTTAGCCGCTATGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: GQGRKALLSRQV*AFKDLFSRYVE Trigger: CTCTACATAGCGGCTAAATAGATCTTTAAAAGCTCAAACCTGCCTAGACAGTAACGCCTTTCTACCTTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS CCA 72 bp | CCATGCTTCCAGACATCAGAAATCTATGGTAAGAATTaGATGCCAGGAGATTTGCACTTTTGCCCACAATTA | + |
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Preference number: 6 (lower is better) Translates to: PCFQTSEIYGKN*MPGDLHFCPQL Trigger: TAATTGTGGGCAAAAGTGCAAATCTCCTGGCATCCAATTCTTACCATAGATTTCTGATGTCTGGAAGCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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| CDS TCA 72 bp | GATTTGCACTTTTGCCCACAATTAAGTTACCAGGATTaGATTTACCCTCCAGTAAGATCCATAAAATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: DLHFCPQLSYQD*IYPPVRSIKFS Trigger: AGAGAATTTTATGGATCTTACTGGAGGGTAAATTCAATCCTGGTAACTTAATTGTGGGCAAAAGTGCAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635446.1 |
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