Pregenerated sensors for LINC02793 (Homo sapiens)
Ensembl gene IDs: ENSG00000285823Ensembl transcript IDs: ENST00000648363.1, ENST00000648660.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGGGATTCCCATGAATGCCTCCTTGAAGCCATGTGCAGTGGGATaGACAGATCAAGGCAAAACCTTGGCCCAGGAGCCGAGGCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGIPMNASLKPCAVG*TDQGKTLAQEPRRV Trigger: CACCCGCCTCGGCTCCTGGGCCAAGGTTTTGCCTTGATCTGTCCATCCCACTGCACATGGCTTCAAGGAGGCATTCATGGGAATCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 90 bp | CCTGACCTGAGCAGGGATTCCCATGAATGCCTCCTTGAAGCCATGTaGAGTGGGATGGACAGATCAAGGCAAAACCTTGGCCCAGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PDLSRDSHECLLEAM*SGMDRSRQNLGPGA Trigger: GGCTCCTGGGCCAAGGTTTTGCCTTGATCTGTCCATCCCACTGCACATGGCTTCAAGGAGGCATTCATGGGAATCCCTGCTCAGGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 90 bp | TCATGTCCCCAGGAAAGCATGCTGGCTTGCTGCGGGACTACTGCCTaGAGGACAACAGGCAATGTTGCAGTTCTCTCATCTCCACAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SCPQESMLACCGTTA*RTTGNVAVLSSPQA Trigger: TGCTTGTGGAGATGAGAGAACTGCAACATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTGGGGACATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 90 bp | GGTATCATGTCCCCAGGAAAGCATGCTGGCTTGCTGCGGGACTACTaGCTGCAGGACAACAGGCAATGTTGCAGTTCTCTCATCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: GIMSPGKHAGLLRDY*LQDNRQCCSSLIST Trigger: TGTGGAGATGAGAGAACTGCAACATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTGGGGACATGATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 90 bp | GACCTTGACACGATGCTGCCTGACCTGAGCAGGGATTCCCATGAATaGCTCCTTGAAGCCATGTGCAGTGGGATGGACAGATCAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: DLDTMLPDLSRDSHE*LLEAMCSGMDRSRQ Trigger: TTGCCTTGATCTGTCCATCCCACTGCACATGGCTTCAAGGAGGCATTCATGGGAATCCCTGCTCAGGTCAGGCAGCATCGTGTCAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 90 bp | AAGAATCTTCAAGGGGCCATGACCTTGACACGATGCTGCCTGACCTaGGCAGGGATTCCCATGAATGCCTCCTTGAAGCCATGTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: KNLQGAMTLTRCCLT*AGIPMNASLKPCAV Trigger: CACTGCACATGGCTTCAAGGAGGCATTCATGGGAATCCCTGCTCAGGTCAGGCAGCATCGTGTCAAGGTCATGGCCCCTTGAAGATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 90 bp | AGCATTCCCCAGAGGACGTCCTGCGTGGCCCCTTTGGTAGCAGCCTaGGACTTTGCAGATGTGATGAAGGATCTTGAGATAGGGAGAATA | + |
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Preference number: 5 (lower is better) Translates to: SIPQRTSCVAPLVAA*DFADVMKDLEIGRI Trigger: TATTCTCCCTATCTCAAGATCCTTCATCACATCTGCAAAGTCTCAGGCTGCTACCAAAGGGGCCACGCAGGACGTCCTCTGGGGAATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 90 bp | TCTGCCTGGAGTGCATTCTCTTATTCACCACCTGGACAACTCCAGTaGATCCTTAAACGCCCAGCTCAGGTATCATGTCCCCAGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SAWSAFSYSPPGQLQ*ILKRPAQVSCPQES Trigger: GCTTTCCTGGGGACATGATACCTGAGCTGGGCGTTTAAGGATGCACTGGAGTTGTCCAGGTGGTGAATAAGAGAATGCACTCCAGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 90 bp | CTCCACCTCATTCATATGAATATTATGGATTCGGGGTCTCGGAAATaGACAGCTACTCAGGGGGCTAGGCTGGATGATTCAAGGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LHLIHMNIMDSGSRK*TATQGARLDDSRTG Trigger: TCCTGTCCTTGAATCATCCAGCCTAGCCCCCTGAGTAGCTGTGCATTTCCGAGACCCCGAATCCATAATATTCATATGAATGAGGTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS CCA 90 bp | TATCCTGGATTATCCTTTTCAGATGGATGCAGGAGGAGTCGGAGCTaGAGGAAAAGGCGATGTGATGACAGAAGCAGAAATTGGAGCGAT | + |
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Preference number: 5 (lower is better) Translates to: YPGLSFSDGCRRSRS*RKRRCDDRSRNWSD Trigger: ATCGCTCCAATTTCTGCTTCTGTCATCACATCGCCTTTTCCTCCAGCTCCGACTCCTCCTGCATCCATCTGAAAAGGATAATCCAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS TCA 90 bp | TTGAATAAATGGCAGCGATTCTCCCTGCCCTCCACCTCATTCATATaGATATTATGGATTCGGGGTCTCGGAAATGCACAGCTACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LNKWQRFSLPSTSFI*ILWIRGLGNAQLLR Trigger: CCTGAGTAGCTGTGCATTTCCGAGACCCCGAATCCATAATATTCATATGAATGAGGTGGAGGGCAGGGAGAATCGCTGCCATTTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 90 bp | ATTTATTTAAAGTGCTTTGTGCAGCCCCCAGCATTTATTAAGGGTTaGATAAATGGCAGCGATTCTCCCTGCCCTCCACCTCATTCATAT | + |
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Preference number: 5 (lower is better) Translates to: IYLKCFVQPPAFIKG*INGSDSPCPPPHSY Trigger: ATATGAATGAGGTGGAGGGCAGGGAGAATCGCTGCCATTTATTCAACCCTTAATAAATGCTGGGGGCTGCACAAAGCACTTTAAATAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS CAA 90 bp | GCCCAGGAAACGCTGCCTCCCTGGGAGCCACACACTGTTGTGGGTTaGGGTCTAGGCCCCGCCAGCCTTGCCCAGGACGAGGTCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AQETLPPWEPHTVVG*GLGPASLAQDEVRA Trigger: AGCTCTGACCTCGTCCTGGGCAAGGCTGGCGGGGCCTAGACCCAAACCCACAACAGTGTGTGGCTCCCAGGGAGGCAGCGTTTCCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS CCA 72 bp | AGGCCCCGCCAGCCTTGCCCAGGACGAGGTCAGAGCTaGTCAGTGGCACATGGAGTTGTGTGCAAGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RPRQPCPGRGQS*SVAHGVVCKCG Trigger: CCCACACTTGCACACAACTCCATGTGCCACTGACCAGCTCTGACCTCGTCCTGGGCAAGGCTGGCGGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 72 bp | CAAGGGGCCATGACCTTGACACGATGCTGCCTGACCTaGGCAGGGATTCCCATGAATGCCTCCTTGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QGAMTLTRCCLT*AGIPMNASLKP Trigger: TGGCTTCAAGGAGGCATTCATGGGAATCCCTGCTCAGGTCAGGCAGCATCGTGTCAAGGTCATGGCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 72 bp | TCCCCAGGAAAGCATGCTGGCTTGCTGCGGGACTACTaGCTGCAGGACAACAGGCAATGTTGCAGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPGKHAGLLRDY*LQDNRQCCSSL Trigger: GAGAGAACTGCAACATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 72 bp | GCTCAGGTATCATGTCCCCAGGAAAGCATGCTGGCTTaGTGCGGGACTACTGCCTGCAGGACAACAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: AQVSCPQESMLA*CGTTACRTTGN Trigger: ATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTGGGGACATGATACCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 72 bp | CAGGTATCATGTCCCCAGGAAAGCATGCTGGCTTGCTaGGGGACTACTGCCTGCAGGACAACAGGCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: QVSCPQESMLAC*GTTACRTTGNV Trigger: AACATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTGGGGACATGATACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS GCA 72 bp | CAGGAAAGCATGCTGGCTTGCTGCGGGACTACTGCCTaGAGGACAACAGGCAATGTTGCAGTTCTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: QESMLACCGTTA*RTTGNVAVLSS Trigger: AGATGAGAGAACTGCAACATTGCCTGTTGTCCTGCAGGCAGTAGTCCCGCAGCAAGCCAGCATGCTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS TCA 72 bp | CAGAGGACGTCCTGCGTGGCCCCTTTGGTAGCAGCCTaGGACTTTGCAGATGTGATGAAGGATCTTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: QRTSCVAPLVAA*DFADVMKDLEI Trigger: TATCTCAAGATCCTTCATCACATCTGCAAAGTCTCAGGCTGCTACCAAAGGGGCCACGCAGGACGTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 72 bp | AGCAGGGATTCCCATGAATGCCTCCTTGAAGCCATGTaGAGTGGGATGGACAGATCAAGGCAAAACCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRDSHECLLEAM*SGMDRSRQNLG Trigger: GCCAAGGTTTTGCCTTGATCTGTCCATCCCACTGCACATGGCTTCAAGGAGGCATTCATGGGAATCCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 72 bp | TGGCAGCGATTCTCCCTGCCCTCCACCTCATTCATATaGATATTATGGATTCGGGGTCTCGGAAATGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WQRFSLPSTSFI*ILWIRGLGNAQ Trigger: CTGTGCATTTCCGAGACCCCGAATCCATAATATTCATATGAATGAGGTGGAGGGCAGGGAGAATCGCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS TCA 72 bp | AAGTGCTTTGTGCAGCCCCCAGCATTTATTAAGGGTTaGATAAATGGCAGCGATTCTCCCTGCCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: KCFVQPPAFIKG*INGSDSPCPPP Trigger: AGGTGGAGGGCAGGGAGAATCGCTGCCATTTATTCAACCCTTAATAAATGCTGGGGGCTGCACAAAGCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS GCA 72 bp | AGTGCATTCTCTTATTCACCACCTGGACAACTCCAGTaGATCCTTAAACGCCCAGCTCAGGTATCATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SAFSYSPPGQLQ*ILKRPAQVSCP Trigger: GGGACATGATACCTGAGCTGGGCGTTTAAGGATGCACTGGAGTTGTCCAGGTGGTGAATAAGAGAATGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS CCA 72 bp | TTATCCTTTTCAGATGGATGCAGGAGGAGTCGGAGCTaGAGGAAAAGGCGATGTGATGACAGAAGCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LSFSDGCRRSRS*RKRRCDDRSRN Trigger: ATTTCTGCTTCTGTCATCACATCGCCTTTTCCTCCAGCTCCGACTCCTCCTGCATCCATCTGAAAAGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS TCA 72 bp | CCCAGAACTGATTATATCCTCAGCCCCACCCATACCTaGGACTTTGCAGATGTGATGAAGGATCTTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: PRTDYILSPTHT*DFADVMKDLEI Trigger: TATCTCAAGATCCTTCATCACATCTGCAAAGTCTCAGGTATGGGTGGGGCTGAGGATATAATCAGTTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS TCA 72 bp | ACAAATCTGCACATCCAGAGGAATTTTGCCCAGAACTaGTTATATCCTCAGCCCCACCCATACCTGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: TNLHIQRNFAQN*LYPQPHPYLRL Trigger: AAGTCTCAGGTATGGGTGGGGCTGAGGATATAATCAGTTCTGGGCAAAATTCCTCTGGATGTGCAGATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS GCA 72 bp | ATTCATATGAATATTATGGATTCGGGGTCTCGGAAATaGACAGCTACTCAGGGGGCTAGGCTGGATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: IHMNIMDSGSRK*TATQGARLDDS Trigger: TGAATCATCCAGCCTAGCCCCCTGAGTAGCTGTGCATTTCCGAGACCCCGAATCCATAATATTCATATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648363.1 |
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| CDS CCA 72 bp | GATGTGATGAAGGATCTTGAGATAGGGAGAATATCCTaGATTATCCTTTTCAGATGGATGCAGGAGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: DVMKDLEIGRIS*IILFRWMQEES Trigger: CGACTCCTCCTGCATCCATCTGAAAAGGATAATCCAGGATATTCTCCCTATCTCAAGATCCTTCATCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648363.1 ENST00000648660.1 |
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| CDS TCA 72 bp | ACAGAGGGCAGAGGATTTTTCCCAGGCCTTGAAACCTaGTGGAGTTTGTCTGATTGGATTTTGAAATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TEGRGFFPGLET*WSLSDWILKLL Trigger: AAGCAATTTCAAAATCCAATCAGACAAACTCCATCAGGTTTCAAGGCCTGGGAAAAATCCTCTGCCCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS CAA 72 bp | TTTCTAGTTTCACAAATCTGCACATCCAGAGGAATTTaGCCCAGAACTGATTATATCCTCAGCCCCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLVSQICTSRGI*PRTDYILSPTH Trigger: ATGGGTGGGGCTGAGGATATAATCAGTTCTGGGCAAAATTCCTCTGGATGTGCAGATTTGTGAAACTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS CAA 90 bp | GGAAATGTCTATAACTGTTGTCTTATGCTGTCCCACCACTGTATTTaGGGAGCAGAAAGCTTGTTTTCTAGTTTCACAAATCTGCACATC | + |
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Preference number: 6 (lower is better) Translates to: GNVYNCCLMLSHHCI*GAESLFSSFTNLHI Trigger: GATGTGCAGATTTGTGAAACTAGAAAACAAGCTTTCTGCTCCCAAAATACAGTGGTGGGACAGCATAAGACAACAGTTATAGACATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS CCA 72 bp | ATAACTGTTGTCTTATGCTGTCCCACCACTGTATTTTaGGAGCAGAAAGCTTGTTTTCTAGTTTCACAAATC | + |
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Preference number: 6 (lower is better) Translates to: ITVVLCCPTTVF*EQKACFLVSQI Trigger: GATTTGTGAAACTAGAAAACAAGCTTTCTGCTCCCAAAATACAGTGGTGGGACAGCATAAGACAACAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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| CDS CAA 72 bp | TATAACTGTTGTCTTATGCTGTCCCACCACTGTATTTaGGGAGCAGAAAGCTTGTTTTCTAGTTTCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: YNCCLMLSHHCI*GAESLFSSFTN Trigger: ATTTGTGAAACTAGAAAACAAGCTTTCTGCTCCCAAAATACAGTGGTGGGACAGCATAAGACAACAGTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648660.1 |
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