Pregenerated sensors for LINC02790 (Homo sapiens)
Ensembl gene IDs: ENSG00000237435Ensembl transcript IDs: ENST00000412513.4, ENST00000413825.7, ENST00000442558.5, ENST00000451675.6, ENST00000593954.6, ENST00000595188.5, ENST00000595613.5, ENST00000598129.5, ENST00000598612.5, ENST00000609411.6, ENST00000623085.3, ENST00000623349.3, ENST00000623830.3, ENST00000624750.3, ENST00000625774.2, ENST00000627733.2, ENST00000631091.1, ENST00000634962.1, ENST00000654486.1, ENST00000655418.1, ENST00000659691.1, ENST00000660327.1, ENST00000662075.1, ENST00000667522.1, ENST00000668462.1, ENST00000671269.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAAACATGTCAGAGCAGATCAGTTGCCCCTCCATCACCCTTTGCATaGGCCAGCCACACTTCTCCAATAGGCTTGCTTCAGGAAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ETCQSRSVAPPSPFA*ASHTSPIGLLQERR Trigger: TCTCCTTTCCTGAAGCAAGCCTATTGGAGAAGTGTGGCTGGCTCATGCAAAGGGTGATGGAGGGGCAACTGATCTGCTCTGACATGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS GCA 90 bp | AAACTCATTGTCCCCACTCTCCCTGCTGGACCTCTGATCTTTGTATaGAGCTTCCATATAGTAATCCCCGTAAGTCAGGTCACAGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: KLIVPTLPAGPLIFV*SFHIVIPVSQVTVR Trigger: GCGCACTGTGACCTGACTTACGGGGATTACTATATGGAAGCTGCATACAAAGATCAGAGGTCCAGCAGGGAGAGTGGGGACAATGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS TCA 90 bp | TGCAGCTTCCATATAGTAATCCCCGTAAGTCAGGTCACAGTGCGCTaGCCTCTTTATGTGATCCTCCGGGAGGATCTCATCCACATTCAT | + |
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Preference number: 5 (lower is better) Translates to: CSFHIVIPVSQVTVR*PLYVILREDLIHIH Trigger: ATGAATGTGGATGAGATCCTCCCGGAGGATCACATAAAGAGGTCAGCGCACTGTGACCTGACTTACGGGGATTACTATATGGAAGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS CCA 90 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATGGGCTCTCTaGATCCTCTCTGTGGCATATCATGATTCCATGAGTTCAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: VVDIQIQITDRRWAL*ILSVAYHDSMSSGL Trigger: GAGACCTGAACTCATGGAATCATGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442558.5 |
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| CDS GCA 90 bp | CTTCACCTCCTCTGTCAGTTCTTTCCTCTTCATGTCCTCAATCTGTaGATTCGCATATCCAGTGTTCATGTGCATATGTGTACACACACA | + |
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Preference number: 5 (lower is better) Translates to: LHLLCQFFPLHVLNL*IRISSVHVHMCTHT Trigger: TGTGTGTGTACACATATGCACATGAACACTGGATATGCGAATGCACAGATTGAGGACATGAAGAGGAAAGAACTGACAGAGGAGGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413825.7 ENST00000595188.5 ENST00000625774.2 ENST00000654486.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS CCA 90 bp | ACATTTAGCCAATGCACATTCATGGAATCACATCTACATGCCAGGTaGGATGCTGGAGTGAGATGTCAGAGGCTTCAATTTCACAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: TFSQCTFMESHLHAR*DAGVRCQRLQFHSL Trigger: AAGACTGTGAAATTGAAGCCTCTGACATCTCACTCCAGCATCCCACCTGGCATGTAGATGTGATTCCATGAATGTGCATTGGCTAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS CCA 90 bp | TTTGATGCTGTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATCATGATTCCATGAGT | + |
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Preference number: 5 (lower is better) Translates to: FDAVVDIQIQITDRR*ALWILSVAYHDSMS Trigger: ACTCATGGAATCATGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTACAGCATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442558.5 |
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| CDS TCA 90 bp | AGATTTCAAATGAGAAAAGCCTGCATTCTGACTCTAGTCTCACTCTaGGGGTTACAGGACACTGTTCATTTCCACTCCTTCAGGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RFQMRKACILTLVSL*GLQDTVHFHSFRMF Trigger: AAACATCCTGAAGGAGTGGAAATGAACAGTGTCCTGTAACCCTCAGAGTGAGACTAGAGTCAGAATGCAGGCTTTTCTCATTTGAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598612.5 |
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| CDS TCA 90 bp | TTACCTTTGAAACACTGTCTTCACTTGAATTCCAGGATAACACTTTaGTGGCTCTTCCTGATCACCTTTCTTCACCTCCTCTGTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LPLKHCLHLNSRITL*WLFLITFLHLLCQF Trigger: GAACTGACAGAGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTTCAAAGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634962.1 |
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| CDS GCA 90 bp | TCCAGGATTGACCTTTCTGTAAGGTTAGTCTTGTATCCAGTGGCTTaGTCAACAGCTAAGCTACTCACAATCACAAAGAAACTATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRIDLSVRLVLYPVA*STAKLLTITKKLSS Trigger: AGAGGATAGTTTCTTTGTGATTGTGAGTAGCTTAGCTGTTGAGCAAGCCACTGGATACAAGACTAACCTTACAGAAAGGTCAATCCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS CCA 90 bp | CCAATGCACATTCATGGAATCACATCTACATGCCAGGTGGGATGCTaGAGTGAGATGTCAGAGGCTTCAATTTCACAGTCTTTTTATATT | + |
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Preference number: 5 (lower is better) Translates to: PMHIHGITSTCQVGC*SEMSEASISQSFYI Trigger: AATATAAAAAGACTGTGAAATTGAAGCCTCTGACATCTCACTCCAGCATCCCACCTGGCATGTAGATGTGATTCCATGAATGTGCATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS TCA 90 bp | ATATCTTTGAAACACTGTCTTCACTTGAATTCCAGGATAACACTTTaGTGGCTCTTCCTGATCACCTTTCTTCACCTCCTCTGTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: ISLKHCLHLNSRITL*WLFLITFLHLLCQF Trigger: GAACTGACAGAGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTTCAAAGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625774.2 ENST00000627733.2 ENST00000671269.1 |
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| CDS CCA 90 bp | TTTGATGCTGTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATAGATTTCAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: FDAVVDIQIQITDRR*ALWILSVAYRFQMR Trigger: TCTCATTTGAAATCTATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTACAGCATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000413825.7 ENST00000593954.6 ENST00000598612.5 ENST00000659691.1 |
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| CDS TCA 90 bp | AGAACTCTAGCCTCATATAGCCACTGCCCACTCTATATGTCTTCTTaGATGCCTAATAGACAACTCACATTTAATATGCTTAGCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RTLASYSHCPLYMSS*MPNRQLTFNMLSSV Trigger: CACAGAGCTAAGCATATTAAATGTGAGTTGTCTATTAGGCATTCAAGAAGACATATAGAGTGGGCAGTGGCTATATGAGGCTAGAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413825.7 ENST00000595188.5 ENST00000625774.2 ENST00000654486.1 ENST00000662075.1 ENST00000667522.1 ENST00000671269.1 |
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| CDS TCA 90 bp | TATTTATTTCCCTTCAGCTCTTTGGAGAACATCCAGGGATCACATTaGAGTCATTTGATGTGTGAACAGAAGATAATGAGCAGATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: YLFPFSSLENIQGSH*SHLMCEQKIMSRCS Trigger: GGAACATCTGCTCATTATCTTCTGTTCACACATCAAATGACTTCAATGTGATCCCTGGATGTTCTCCAAAGAGCTGAAGGGAAATAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000412513.4 ENST00000451675.6 ENST00000598129.5 ENST00000609411.6 ENST00000623830.3 ENST00000654486.1 ENST00000655418.1 ENST00000660327.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 |
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| CDS CCA 90 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATGGGCTCTCTaGATCCTCTCTGTGGCATATTTACTTTATATTTTGTGTTATGCA | + |
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Preference number: 5 (lower is better) Translates to: VVDIQIQITDRRWAL*ILSVAYLLYILCYA Trigger: TGCATAACACAAAATATAAAGTAAATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595613.5 |
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| CDS CCA 90 bp | TTTGATGCTGTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATTTACTTTATATTTTG | + |
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Preference number: 5 (lower is better) Translates to: FDAVVDIQIQITDRR*ALWILSVAYLLYIL Trigger: CAAAATATAAAGTAAATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTACAGCATCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595613.5 |
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| CDS GCA 90 bp | CTTGAATGCCTAATAGACAACTCACATTTAATATGCTTAGCTCTGTaGTTCTGGTCTTTATCACTAAACCTGCTTCTCTTCCAAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: LECLIDNSHLICLAL*FWSLSLNLLLFQIL Trigger: CAGAATTTGGAAGAGAAGCAGGTTTAGTGATAAAGACCAGAAGCACAGAGCTAAGCATATTAAATGTGAGTTGTCTATTAGGCATTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413825.7 ENST00000595188.5 ENST00000625774.2 ENST00000654486.1 ENST00000662075.1 ENST00000667522.1 ENST00000671269.1 |
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| CDS GCA 90 bp | TCTATATGTCTTCTTGAATGCCTAATAGACAACTCACATTTAATATaGTTAGCTCTGTGCTTCTGGTCTTTATCACTAAACCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SICLLECLIDNSHLI*LALCFWSLSLNLLL Trigger: GAGAAGCAGGTTTAGTGATAAAGACCAGAAGCACAGAGCTAAGCATATTAAATGTGAGTTGTCTATTAGGCATTCAAGAAGACATATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413825.7 ENST00000595188.5 ENST00000625774.2 ENST00000654486.1 ENST00000662075.1 ENST00000667522.1 ENST00000671269.1 |
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| CDS TCA 72 bp | CAGAGCAGATCAGTTGCCCCTCCATCACCCTTTGCATaGGCCAGCCACACTTCTCCAATAGGCTTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QSRSVAPPSPFA*ASHTSPIGLLQ Trigger: CTGAAGCAAGCCTATTGGAGAAGTGTGGCTGGCTCATGCAAAGGGTGATGGAGGGGCAACTGATCTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS GCA 72 bp | ATGTCAGAGCAGATCAGTTGCCCCTCCATCACCCTTTaGATGAGCCAGCCACACTTCTCCAATAGGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: MSEQISCPSITL*MSQPHFSNRLA Trigger: AGCAAGCCTATTGGAGAAGTGTGGCTGGCTCATGCAAAGGGTGATGGAGGGGCAACTGATCTGCTCTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS GCA 72 bp | GTCCCCACTCTCCCTGCTGGACCTCTGATCTTTGTATaGAGCTTCCATATAGTAATCCCCGTAAGTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VPTLPAGPLIFV*SFHIVIPVSQV Trigger: GACCTGACTTACGGGGATTACTATATGGAAGCTGCATACAAAGATCAGAGGTCCAGCAGGGAGAGTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS GCA 72 bp | GAACTTTTAGGTGGAGGTAAGGACCTGGACTTACCTTaGTGGTGTGATGGTTCACGCCTGTATCCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ELLGGGKDLDLP*WCDGSRLYPQH Trigger: ATGCTGGGGATACAGGCGTGAACCATCACACCAGCAAGGTAAGTCCAGGTCCTTACCTCCACCTAAAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662075.1 |
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| CDS CCA 72 bp | CAGTTCACAGTGACACACTGTCCTTTGGACTGGCGTTaGTGTACAGAGGGGGTCCTTAGTATCCATGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: QFTVTHCPLDWR*CTEGVLSIHAY Trigger: ATAGGCATGGATACTAAGGACCCCCTCTGTACACCAACGCCAGTCCAAAGGACAGTGTGTCACTGTGAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 22 transcripts: ENST00000412513.4 ENST00000413825.7 ENST00000442558.5 ENST00000451675.6 ENST00000593954.6 ENST00000595613.5 ENST00000598129.5 ENST00000598612.5 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000623830.3 ENST00000624750.3 ENST00000625774.2 ENST00000627733.2 ENST00000654486.1 ENST00000655418.1 ENST00000659691.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS TCA 72 bp | CATATAGTAATCCCCGTAAGTCAGGTCACAGTGCGCTaGCCTCTTTATGTGATCCTCCGGGAGGATCTCATC | + |
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Preference number: 6 (lower is better) Translates to: HIVIPVSQVTVR*PLYVILREDLI Trigger: GATGAGATCCTCCCGGAGGATCACATAAAGAGGTCAGCGCACTGTGACCTGACTTACGGGGATTACTATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS CCA 72 bp | CTTTTAGGTGGAGGTAAGGACCTGGACTTACCTTGCTaGTGTGATGGTTCACGCCTGTATCCCCAGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: LLGGGKDLDLPC*CDGSRLYPQHF Trigger: AAAATGCTGGGGATACAGGCGTGAACCATCACACCAGCAAGGTAAGTCCAGGTCCTTACCTCCACCTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662075.1 |
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| CDS CCA 72 bp | AATTTCCAGTTCACAGTGACACACTGTCCTTTGGACTaGCGTTGGTGTACAGAGGGGGTCCTTAGTATCCAT | + |
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Preference number: 6 (lower is better) Translates to: NFQFTVTHCPLD*RWCTEGVLSIH Trigger: ATGGATACTAAGGACCCCCTCTGTACACCAACGCCAGTCCAAAGGACAGTGTGTCACTGTGAACTGGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 22 transcripts: ENST00000412513.4 ENST00000413825.7 ENST00000442558.5 ENST00000451675.6 ENST00000593954.6 ENST00000595613.5 ENST00000598129.5 ENST00000598612.5 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000623830.3 ENST00000624750.3 ENST00000625774.2 ENST00000627733.2 ENST00000654486.1 ENST00000655418.1 ENST00000659691.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS GCA 72 bp | CACATTCATGGAATCACATCTACATGCCAGGTGGGATaGTGGAGTGAGATGTCAGAGGCTTCAATTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HIHGITSTCQVG*WSEMSEASISQ Trigger: CTGTGAAATTGAAGCCTCTGACATCTCACTCCAGCATCCCACCTGGCATGTAGATGTGATTCCATGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYQS Trigger: GGACTGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000631091.1 |
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| CDS CCA 72 bp | ATTCATGGAATCACATCTACATGCCAGGTGGGATGCTaGAGTGAGATGTCAGAGGCTTCAATTTCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IHGITSTCQVGC*SEMSEASISQS Trigger: AGACTGTGAAATTGAAGCCTCTGACATCTCACTCCAGCATCCCACCTGGCATGTAGATGTGATTCCATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS CCA 72 bp | CAATGCACATTCATGGAATCACATCTACATGCCAGGTaGGATGCTGGAGTGAGATGTCAGAGGCTTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: QCTFMESHLHAR*DAGVRCQRLQF Trigger: AAATTGAAGCCTCTGACATCTCACTCCAGCATCCCACCTGGCATGTAGATGTGATTCCATGAATGTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660327.1 |
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| CDS CAA 90 bp | ATGACATCCTACCCATCCAGGATTGACCTTTCTGTAAGGTTAGTCTaGTATCCAGTGGCTTGCTCAACAGCTAAGCTACTCACAATCACA | + |
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Preference number: 6 (lower is better) Translates to: MTSYPSRIDLSVRLV*YPVACSTAKLLTIT Trigger: TGTGATTGTGAGTAGCTTAGCTGTTGAGCAAGCCACTGGATACAAGACTAACCTTACAGAAAGGTCAATCCTGGATGGGTAGGATGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS CCA 72 bp | ATACAAATACAGATAACTGACCGGAGATGGGCTCTCTaGATCCTCTCTGTGGCATATCATGATTCCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: IQIQITDRRWAL*ILSVAYHDSMS Trigger: ACTCATGGAATCATGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442558.5 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATCATGAT | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYHD Trigger: ATCATGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442558.5 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATATCTCT | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYIS Trigger: AGAGATATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598129.5 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATCTAGTA | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYLV Trigger: TACTAGATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624750.3 |
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| CDS CAA 90 bp | GGGAGGATCTCATCCACATTCATGGTTTTAACCATGCCTCATATGTaGATGACATCCTACCCATCCAGGATTGACCTTTCTGTAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: GRISSTFMVLTMPHM*MTSYPSRIDLSVRL Trigger: TAACCTTACAGAAAGGTCAATCCTGGATGGGTAGGATGTCATCAACATATGAGGCATGGTTAAAACCATGAATGTGGATGAGATCCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS TCA 72 bp | AAACACTGTCTTCACTTGAATTCCAGGATAACACTTTaGTGGCTCTTCCTGATCACCTTTCTTCACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KHCLHLNSRITL*WLFLITFLHLL Trigger: GAGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000412513.4 ENST00000413825.7 ENST00000451675.6 ENST00000593954.6 ENST00000595188.5 ENST00000595613.5 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000623830.3 ENST00000624750.3 ENST00000625774.2 ENST00000627733.2 ENST00000634962.1 ENST00000654486.1 ENST00000655418.1 ENST00000659691.1 ENST00000660327.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATAGATTT | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYRF Trigger: AAATCTATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000413825.7 ENST00000593954.6 ENST00000598612.5 ENST00000659691.1 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATTTACTT | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYLL Trigger: AAGTAAATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595613.5 |
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| CDS CAA 72 bp | GAAACACTGTCTTCACTTGAATTCCAGGATAACACTTaGATGGCTCTTCCTGATCACCTTTCTTCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ETLSSLEFQDNT*MALPDHLSSPP Trigger: AGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000412513.4 ENST00000413825.7 ENST00000451675.6 ENST00000593954.6 ENST00000595188.5 ENST00000595613.5 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000623830.3 ENST00000624750.3 ENST00000625774.2 ENST00000627733.2 ENST00000634962.1 ENST00000654486.1 ENST00000655418.1 ENST00000659691.1 ENST00000660327.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS CAA 90 bp | GTTACCTTTGAAACACTGTCTTCACTTGAATTCCAGGATAACACTTaGATGGCTCTTCCTGATCACCTTTCTTCACCTCCTCTGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VTFETLSSLEFQDNT*MALPDHLSSPPLSV Trigger: AACTGACAGAGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTTCAAAGGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634962.1 |
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| CDS GCA 72 bp | GACCTTTCTGTAAGGTTAGTCTTGTATCCAGTGGCTTaGTCAACAGCTAAGCTACTCACAATCACAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DLSVRLVLYPVA*STAKLLTITKK Trigger: TTTCTTTGTGATTGTGAGTAGCTTAGCTGTTGAGCAAGCCACTGGATACAAGACTAACCTTACAGAAAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000598612.5 ENST00000634962.1 |
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| CDS CCA 72 bp | GTAGTTGACATACAAATACAGATAACTGACCGGAGATaGGCTCTCTGGATCCTCTCTGTGGCATATTTTATA | + |
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Preference number: 6 (lower is better) Translates to: VVDIQIQITDRR*ALWILSVAYFI Trigger: TATAAAATATGCCACAGAGAGGATCCAGAGAGCCCATCTCCGGTCAGTTATCTGTATTTGTATGTCAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000412513.4 ENST00000451675.6 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000623830.3 ENST00000654486.1 ENST00000655418.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 |
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| CDS CAA 90 bp | CATATCTTTGAAACACTGTCTTCACTTGAATTCCAGGATAACACTTaGATGGCTCTTCCTGATCACCTTTCTTCACCTCCTCTGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HIFETLSSLEFQDNT*MALPDHLSSPPLSV Trigger: AACTGACAGAGGAGGTGAAGAAAGGTGATCAGGAAGAGCCATCAAAGTGTTATCCTGGAATTCAAGTGAAGACAGTGTTTCAAAGATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625774.2 ENST00000627733.2 ENST00000671269.1 |
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| CDS TCA 72 bp | CTTTTAGGTGGAGGTAAGGACCTGGACTTACCTTGCTaGGTTAAAAGAAATAGTAGAAAGATTTCAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LLGGGKDLDLPC*VKRNSRKISNE Trigger: CTCATTTGAAATCTTTCTACTATTTCTTTTAACTCAGCAAGGTAAGTCCAGGTCCTTACCTCCACCTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654486.1 |
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| CDS GCA 72 bp | TTCTCTTCCAAATTCTGTAAATGCCAACTCCATTCCTaGAGTTCTTTAAGTGACAATTTTGGCACTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: FSSKFCKCQLHS*SSLSDNFGTTF Trigger: AAAGGTAGTGCCAAAATTGTCACTTAAAGAACTGCAGGAATGGAGTTGGCATTTACAGAATTTGGAAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000412513.4 ENST00000413825.7 ENST00000593954.6 ENST00000595188.5 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000624750.3 ENST00000625774.2 ENST00000627733.2 ENST00000634962.1 ENST00000654486.1 ENST00000655418.1 ENST00000660327.1 ENST00000662075.1 ENST00000667522.1 ENST00000668462.1 ENST00000671269.1 |
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| CDS GCA 72 bp | TCTTCATGTCCTCAATATTTAATATGCTTAGCTCTGTaGTTCTGGTCTTTATCACTAAACCTGCTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSCPQYLICLAL*FWSLSLNLLLF Trigger: GAAGAGAAGCAGGTTTAGTGATAAAGACCAGAAGCACAGAGCTAAGCATATTAAATATTGAGGACATGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000412513.4 ENST00000593954.6 ENST00000609411.6 ENST00000623085.3 ENST00000623349.3 ENST00000624750.3 ENST00000627733.2 ENST00000634962.1 ENST00000655418.1 ENST00000660327.1 |
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| CDS GCA 72 bp | CTAATAGACAACTCACATTTAATATGCTTAGCTCTGTaGTTCTGGTCTTTATCACTAAACCTGCTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LIDNSHLICLAL*FWSLSLNLLLF Trigger: GAAGAGAAGCAGGTTTAGTGATAAAGACCAGAAGCACAGAGCTAAGCATATTAAATGTGAGTTGTCTATTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413825.7 ENST00000595188.5 ENST00000625774.2 ENST00000654486.1 ENST00000662075.1 ENST00000667522.1 ENST00000671269.1 |
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