Pregenerated sensors for LINC02789 (Homo sapiens)
Ensembl gene IDs: ENSG00000231718Ensembl transcript IDs: ENST00000452199.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCTGGGTGTGTCTGTGAGGGTGCTGCCAAAGGAGATTAGTATTTaGTGCAGTGTACTGGGAGAGGCAGACCCACCGTCAATCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: FLGVSVRVLPKEISI*CSVLGEADPPSIWV Trigger: CACCCAGATTGACGGTGGGTCTGCCTCTCCCAGTACACTGCATCAAATACTAATCTCCTTTGGCAGCACCCTCACAGACACACCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 90 bp | AGACTAGACTGGCTTAGCCTCCCAGCCTACATCTTTCTCCTGTGTTaGATGCTTCCTGTCCTCAAACATCAGAATCCAAGTTCTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RLDWLSLPAYIFLLC*MLPVLKHQNPSSSA Trigger: AGCTGAAGAACTTGGATTCTGATGTTTGAGGACAGGAAGCATTCAACACAGGAGAAAGATGTAGGCTGGGAGGCTAAGCCAGTCTAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 90 bp | TGGTTTCTTACTCCACCTTCTCTGATATTATCATGTGGGGGAATTTaGGTACCATGTTTCCATCTAATGAGGGTGGAGTCCAAGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: WFLTPPSLILSCGGI*VPCFHLMRVESKLP Trigger: CGGGAGCTTGGACTCCACCCTCATTAGATGGAAACATGGTACCCAAATTCCCCCACATGATAATATCAGAGAAGGTGGAGTAAGAAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 90 bp | TTGATTGGATTGAAGGATGCAGAGTATTGTTCCTGGGTGTGTCTGTaGGGGTGCTGCCAAAGGAGATTAGTATTTGATGCAGTGTACTGG | + |
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Preference number: 5 (lower is better) Translates to: LIGLKDAEYCSWVCL*GCCQRRLVFDAVYW Trigger: CCAGTACACTGCATCAAATACTAATCTCCTTTGGCAGCACCCTCACAGACACACCCAGGAACAATACTCTGCATCCTTCAATCCAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 90 bp | ATGAAGGTCTTGGTTTCTTACTCCACCTTCTCTGATATTATCATGTaGGGGAATTTGGGTACCATGTTTCCATCTAATGAGGGTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: MKVLVSYSTFSDIIM*GNLGTMFPSNEGGV Trigger: GACTCCACCCTCATTAGATGGAAACATGGTACCCAAATTCCCCCACATGATAATATCAGAGAAGGTGGAGTAAGAAACCAAGACCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 90 bp | TTGCTACAGGTTCGCATATCCCTGAGATTCGTTTCAGTTGAGCAGTaGTTGTCTTTTCTCATTCAACTTGATTGTCCTGGTTCTTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LLQVRISLRFVSVEQ*LSFLIQLDCPGSWY Trigger: ATACCAAGAACCAGGACAATCAAGTTGAATGAGAAAAGACAATCACTGCTCAACTGAAACGAATCTCAGGGATATGCGAACCTGTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS GCA 72 bp | GTCAATCTGGGTGGGTGCCATCTAATCAGCTGCCAGTaGGGCCAGAATAGAAAGTGGGCAGAAGAACGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VNLGGCHLISCQ*GQNRKWAEERG Trigger: TCCACGTTCTTCTGCCCACTTTCTATTCTGGCCGCACTGGCAGCTGATTAGATGGCACCCACCCAGATTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | CGGCAGGGATGGGAGTTTAGGCTCTCACTAGGTCTATaGTGGCATCATCCTATCTGGGAGGAGGAGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: RQGWEFRLSLGL*WHHPIWEEEKY Trigger: GTACTTCTCCTCCTCCCAGATAGGATGATGCCATCATAGACCTAGTGAGAGCCTAAACTCCCATCCCTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 72 bp | TGCTGCCAAAGGAGATTAGTATTTGATGCAGTGTACTaGGAGAGGCAGACCCACCGTCAATCTGGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: CCQRRLVFDAVY*ERQTHRQSGWV Trigger: CACCCACCCAGATTGACGGTGGGTCTGCCTCTCCCAGTACACTGCATCAAATACTAATCTCCTTTGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 72 bp | CTGTCCTCAAACATCAGAATCCAAGTTCTTCAGCTTTaGGACTCAGACTGGCCTCTTTGCTTGCAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSSNIRIQVLQL*DSDWPLCLQMA Trigger: GGCCATCTGCAAGCAAAGAGGCCAGTCTGAGTCCCAAAGCTGAAGAACTTGGATTCTGATGTTTGAGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | ACTGGGTGTCTTGTAACAGCCAGGTCAGCATGTAGATaGATTGCCTGCATGGTCTCCACTGACACTACGAAG | + |
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Preference number: 6 (lower is better) Translates to: TGCLVTARSACR*IACMVSTDTTK Trigger: CTTCGTAGTGTCAGTGGAGACCATGCAGGCAATCAATCTACATGCTGACCTGGCTGTTACAAGACACCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | CCAAGTTCTTCAGCTTTGGGACTCAGACTGGCCTCTTaGCTTGCAGATGGCCTATTGTGGAACCTTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: PSSSALGLRLAS*LADGLLWNLVI Trigger: GATCACAAGGTTCCACAATAGGCCATCTGCAAGCAAAGAGGCCAGTCTGAGTCCCAAAGCTGAAGAACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | CCTGTCCTCAAACATCAGAATCCAAGTTCTTCAGCTTaGGGACTCAGACTGGCCTCTTTGCTTGCAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: PVLKHQNPSSSA*GLRLASLLADG Trigger: GCCATCTGCAAGCAAAGAGGCCAGTCTGAGTCCCAAAGCTGAAGAACTTGGATTCTGATGTTTGAGGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 72 bp | ATCAGAATCCAAGTTCTTCAGCTTTGGGACTCAGACTaGCCTCTTTGCTTGCAGATGGCCTATTGTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: IRIQVLQLWDSD*PLCLQMAYCGT Trigger: GGTTCCACAATAGGCCATCTGCAAGCAAAGAGGCCAGTCTGAGTCCCAAAGCTGAAGAACTTGGATTCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | GTGGCCTTCACTGATACACAAAGGGGAAGTTGTACTTaGTTACTGATCGGCAGGGATGGGAGTTTAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VAFTDTQRGSCT*LLIGRDGSLGS Trigger: AGAGCCTAAACTCCCATCCCTGCCGATCAGTAACAAAGTACAACTTCCCCTTTGTGTATCAGTGAAGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | TACTGTCAACTTGATTGGATTGAAGGATGCAGAGTATaGTTCCTGGGTGTGTCTGTGAGGGTGCTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: YCQLDWIEGCRV*FLGVSVRVLPK Trigger: CTTTGGCAGCACCCTCACAGACACACCCAGGAACAATACTCTGCATCCTTCAATCCAATCAAGTTGACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 90 bp | TTGGTTTCTTACTCCACCTTCTCTGATATTATCATGTGGGGGAATTaGGGTACCATGTTTCCATCTAATGAGGGTGGAGTCCAAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LVSYSTFSDIIMWGN*GTMFPSNEGGVQAP Trigger: GGGAGCTTGGACTCCACCCTCATTAGATGGAAACATGGTACCCAAATTCCCCCACATGATAATATCAGAGAAGGTGGAGTAAGAAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | TACGAAGGTGTGACAGGAGTTACCTTGGGACAGGAATaGAGGTCTTGGTTTCTTACTCCACCTTCTCTGATA | + |
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Preference number: 6 (lower is better) Translates to: YEGVTGVTLGQE*RSWFLTPPSLI Trigger: TATCAGAGAAGGTGGAGTAAGAAACCAAGACCTTCATTCCTGTCCCAAGGTAACTCCTGTCACACCTTCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CCA 72 bp | ACTCCACCTTCTCTGATATTATCATGTGGGGGAATTTaGGTACCATGTTTCCATCTAATGAGGGTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPPSLILSCGGI*VPCFHLMRVES Trigger: GGACTCCACCCTCATTAGATGGAAACATGGTACCCAAATTCCCCCACATGATAATATCAGAGAAGGTGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | GCTACCTCATTACTGCCAGGTAAGTGTGGCCTTCACTaGTACACAAAGGGGAAGTTGTACTTTGTTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: ATSLLPGKCGLH*YTKGKLYFVTD Trigger: ATCAGTAACAAAGTACAACTTCCCCTTTGTGTATCAGTGAAGGCCACACTTACCTGGCAGTAATGAGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS GCA 72 bp | TTAGCCTCCCAGCCTACATCTTTCTCCTGTGTTGAATaGTTCCTGTCCTCAAACATCAGAATCCAAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LASQPTSFSCVE*FLSSNIRIQVL Trigger: AAGAACTTGGATTCTGATGTTTGAGGACAGGAAGCATTCAACACAGGAGAAAGATGTAGGCTGGGAGGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | TACTCCACCTTCTCTGATATTATCATGTGGGGGAATTaGGGTACCATGTTTCCATCTAATGAGGGTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: YSTFSDIIMWGN*GTMFPSNEGGV Trigger: GACTCCACCCTCATTAGATGGAAACATGGTACCCAAATTCCCCCACATGATAATATCAGAGAAGGTGGAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | TCTCATGGGACTCCAATGACACAGGTGTTTGATTCTTaGCTACAGGTTCGCATATCCCTGAGATTCGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SHGTPMTQVFDS*LQVRISLRFVS Trigger: TGAAACGAATCTCAGGGATATGCGAACCTGTAGCAAAGAATCAAACACCTGTGTCATTGGAGTCCCATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | TGTGACAGGAGTTACCTTGGGACAGGAATGAAGGTCTaGGTTTCTTACTCCACCTTCTCTGATATTATCATG | + |
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Preference number: 6 (lower is better) Translates to: CDRSYLGTGMKV*VSYSTFSDIIM Trigger: CATGATAATATCAGAGAAGGTGGAGTAAGAAACCAAGACCTTCATTCCTGTCCCAAGGTAACTCCTGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | GACACTGTGATGGTTAATACTGTCAACTTGATTGGATaGAAGGATGCAGAGTATTGTTCCTGGGTGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DTVMVNTVNLIG*KDAEYCSWVCL Trigger: CAGACACACCCAGGAACAATACTCTGCATCCTTCAATCCAATCAAGTTGACAGTATTAACCATCACAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | TGCCACATTCCTTCCCTGAGGCATTCAGCACAGAGCTaGTTTCATGCTTCCATTAACGTTTTCAATTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: CHIPSLRHSAQS*FHASINVFNFE Trigger: TTCAAAATTGAAAACGTTAATGGAAGCATGAAATCAGCTCTGTGCTGAATGCCTCAGGGAAGGAATGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | GTTCGCATATCCCTGAGATTCGTTTCAGTTGAGCAGTaGTTGTCTTTTCTCATTCAACTTGATTGTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VRISLRFVSVEQ*LSFLIQLDCPG Trigger: ACCAGGACAATCAAGTTGAATGAGAAAAGACAATCACTGCTCAACTGAAACGAATCTCAGGGATATGCGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | AGGTGTTTGATTCTTTGCTACAGGTTCGCATATCCCTaGGATTCGTTTCAGTTGAGCAGTGATTGTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RCLILCYRFAYP*DSFQLSSDCLF Trigger: GAAAAGACAATCACTGCTCAACTGAAACGAATCTCAGGGATATGCGAACCTGTAGCAAAGAATCAAACACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | TTTATCTTCTCATGGGACTCCAATGACACAGGTGTTTaGTTCTTTGCTACAGGTTCGCATATCCCTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: FIFSWDSNDTGV*FFATGSHIPEI Trigger: AATCTCAGGGATATGCGAACCTGTAGCAAAGAATCAAACACCTGTGTCATTGGAGTCCCATGAGAAGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | CCTCTTTGCTTGCAGATGGCCTATTGTGGAACCTTGTaGTCATGTGAGTTAATACTCCTTAATAAACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLCLQMAYCGTL*SCELILLNKLS Trigger: AGAGAGTTTATTAAGGAGTATTAACTCACATGATCACAAGGTTCCACAATAGGCCATCTGCAAGCAAAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS CAA 72 bp | TTCTCTTTGGACACTGTGATGGTTAATACTGTCAACTaGATTGGATTGAAGGATGCAGAGTATTGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FSLDTVMVNTVN*IGLKDAEYCSW Trigger: CCAGGAACAATACTCTGCATCCTTCAATCCAATCAAGTTGACAGTATTAACCATCACAGTGTCCAAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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| CDS TCA 72 bp | ACTAGGCAGAAGGACAAGGCAGTCTTCATTATTGCTTaGGGTCATAAATGTCCTTTATTTTTCCTATTCATT | + |
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Preference number: 6 (lower is better) Translates to: TRQKDKAVFIIA*GHKCPLFFLFI Trigger: AATGAATAGGAAAAATAAAGGACATTTATGACCTCAAGCAATAATGAAGACTGCCTTGTCCTTCTGCCTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452199.1 |
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