Pregenerated sensors for LINC02785 (Homo sapiens)
Ensembl gene IDs: ENSG00000226822, ENSG00000284338Ensembl transcript IDs: ENST00000419428.2, ENST00000451023.1, ENST00000634635.1, ENST00000634935.1, ENST00000635340.2, ENST00000638586.1, ENST00000638593.1, ENST00000639685.2, ENST00000640155.1, ENST00000640493.1, ENST00000657699.1, ENST00000661268.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACTATCCCGGTGGATGTCTAAGTGTCTCTAGGCTGCGACACAGGTaGCCAGGAGGGCACAAAACTGCCTTCTGGAGTGGACAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: DYPGGCLSVSRLRHR*PGGHKTAFWSGQEG Trigger: ACCTTCCTGTCCACTCCAGAAGGCAGTTTTGTGCCCTCCTGGGCACCTGTGTCGCAGCCTAGAGACACTTAGACATCCACCGGGATAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 90 bp | TGCTTAGGCTCTTTGCTCACCATCCTCGAGGCAGGAGCTCAAGTCTaGTTGTCTCATATCTGTGTTCGTTATCAGCGCAGTAAAGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: CLGSLLTILEAGAQV*LSHICVRYQRSKAR Trigger: ACGGGCTTTACTGCGCTGATAACGAACACAGATATGAGACAAGCAGACTTGAGCTCCTGCCTCGAGGATGGTGAGCAAAGAGCCTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS CCA 90 bp | CATTCTAGGTTTTTGCCCAGCTGCAGATGGCTTGAGAGAACTGCCTaGTTACAGCTGATGGTGAGTTACAGTCAGTGTGAGTGTGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: HSRFLPSCRWLERTA*LQLMVSYSQCECAW Trigger: CCACGCACACTCACACTGACTGTAACTCACCATCAGCTGTAACCAGGCAGTTCTCTCAAGCCATCTGCAGCTGGGCAAAAACCTAGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CCA 90 bp | GGAGTGGTCACTTACTTTTTAAGTGTTGTTGCCACGAAAGGAAGCTaGGTATCATCCACTCACCTCCTCCCCACAGCAGGTAGAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GVVTYFLSVVATKGS*VSSTHLLPTAGRAA Trigger: TGCTGCTCTACCTGCTGTGGGGAGGAGGTGAGTGGATGATACCCAGCTTCCTTTCGTGGCAACAACACTTAAAAAGTAAGTGACCACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS GCA 90 bp | TTACAGCTGATGGTGAGTTACAGTCAGTGTGAGTGTGCGTGGGCATaGACACTCAGTAAGCAGGCAGCAGCTGTTTGGTTAGAGAACGAA | + |
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Preference number: 5 (lower is better) Translates to: LQLMVSYSQCECAWA*TLSKQAAAVWLENE Trigger: TTCGTTCTCTAACCAAACAGCTGCTGCCTGCTTACTGAGTGTGCATGCCCACGCACACTCACACTGACTGTAACTCACCATCAGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 90 bp | CAACAGTTGCAAGAACATGCTCTAGGAGGTAAAGGCAAAAGCCTCTaGATCATTTCCCCCTGTGAATCCGGTGAGGACAGTGAGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QQLQEHALGGKGKSL*IISPCESGEDSEEA Trigger: TGCTTCCTCACTGTCCTCACCGGATTCACAGGGGGAAATGATTCAGAGGCTTTTGCCTTTACCTCCTAGAGCATGTTCTTGCAACTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000451023.1 ENST00000635340.2 ENST00000638586.1 ENST00000639685.2 |
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| CDS GCA 90 bp | AAGATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTCCTCCCCACAGCAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: KMLEKCGMKLLLNCI*SISGSGHSSPQQVE Trigger: CTCTACCTGCTGTGGGGAGGAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 90 bp | ATCTGCAGCATATCAGGGAGTGGTCACTTACTTTTTAAGTGTTGTTaGCACGAAAGGAAGCTGGGTATCATCCACTCACCTCCTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: ICSISGSGHLLFKCC*HERKLGIIHSPPPH Trigger: GTGGGGAGGAGGTGAGTGGATGATACCCAGCTTCCTTTCGTGGCAACAACACTTAAAAAGTAAGTGACCACTCCCTGATATGCTGCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS GCA 90 bp | TCTGTGCATGCTCTGGCTGTGTTAACTTGCCACTTCTTAACTCTGTaGCTTATGGAAATGAGGCTCTTTGACTTGGTCTCTCCAGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SVHALAVLTCHFLTL*LMEMRLFDLVSPVG Trigger: TCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTTAACACAGCCAGAGCATGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS CCA 90 bp | GAGTGTGCGTGGGCATGCACACTCAGTAAGCAGGCAGCAGCTGTTTaGTTAGAGAACGAAACTGGCCAATTGGAAACTATGGTATTATTT | + |
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Preference number: 5 (lower is better) Translates to: ECAWACTLSKQAAAV*LENETGQLETMVLF Trigger: AAATAATACCATAGTTTCCAATTGGCCAGTTTCGTTCTCTAACCAAACAGCTGCTGCCTGCTTACTGAGTGTGCATGCCCACGCACACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 90 bp | GAACACCCTGACCTGGCTCATGAGGACGGTTCAATAAATGCTTCTTaGATTGAACTTGTGTTAGTATCTAAGTCCCCCTTCCCAGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: EHPDLAHEDGSINAS*IELVLVSKSPFPVH Trigger: ATGCACTGGGAAGGGGGACTTAGATACTAACACAAGTTCAATTCAAGAAGCATTTATTGAACCGTCCTCATGAGCCAGGTCAGGGTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000634635.1 ENST00000635340.2 ENST00000639685.2 ENST00000640493.1 ENST00000657699.1 ENST00000661268.1 |
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| CDS CCA 90 bp | CTCCTGGCTTCTGCAAGATTGGTCTGTGTTGTGAGTGAAGAGGTATaGACAAGATTCTACCTTATGGAAATGAGGCTCTTTGACTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLASARLVCVVSEEV*TRFYLMEMRLFDLV Trigger: GACCAAGTCAAAGAGCCTCATTTCCATAAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 90 bp | AACTTGCCACTTCTTAACTCTGTGCCTTATGGAAATGAGGCTCTTTaGCTTGGTCTCTCCAGTTGGACTGAGCCACACATGGTTTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: NLPLLNSVPYGNEAL*LGLSSWTEPHMVLN Trigger: ATTCAAAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS TCA 90 bp | TACTCAGAACCTCCTGGCTTCTGCAAGATTGGTCTGTGTTGTGAGTaGAGAGGTATGGACAAGATTCTACCTTATGGAAATGAGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: YSEPPGFCKIGLCCE*RGMDKILPYGNEAL Trigger: AAGAGCCTCATTTCCATAAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAGGTTCTGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 90 bp | TTGAGGTCGAAGTTTTCTTCTGTGCATGCTCTGGCTGTGTTAACTTaGCACTTCTTAACTCTGTGCCTTATGGAAATGAGGCTCTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LRSKFSSVHALAVLT*HFLTLCLMEMRLFD Trigger: GTCAAAGAGCCTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTTAACACAGCCAGAGCATGCACAGAAGAAAACTTCGACCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS TCA 90 bp | TGGACTGAGCCACACATGGTTTTGAATATGCTCTTGACCTCACCATaGAAGATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATTGC | + |
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Preference number: 5 (lower is better) Translates to: WTEPHMVLNMLLTSP*KMLEKCGMKLLLNC Trigger: GCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATCTTTCATGGTGAGGTCAAGAGCATATTCAAAACCATGTGTGGCTCAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000635340.2 ENST00000638593.1 ENST00000639685.2 ENST00000640155.1 ENST00000640493.1 ENST00000657699.1 ENST00000661268.1 |
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| CDS TCA 90 bp | TGTGCCTGCAAAATAACTAGACATTCTTATGGAAATGAGGCTCTTTaGCTTGGTCTCTCCAGTTGGACTGAGCCACACATGGTTTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: CACKITRHSYGNEAL*LGLSSWTEPHMVLN Trigger: ATTCAAAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGAATGTCTAGTTATTTTGCAGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS GCA 90 bp | AAGATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTTTCTGTTTCCTCTTTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: KMLEKCGMKLLLNCI*SISGSGHFLFPLCV Trigger: AACACAAAGAGGAAACAGAAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS GCA 90 bp | AGAGAACGAAACTGGCCAATTGGAAACTATGGTATTATTTCTTTATaGAGACCTTACTCAGAACCTCCTGGCTTCTGCAAGATTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RERNWPIGNYGIISL*RPYSEPPGFCKIGL Trigger: CAGACCAATCTTGCAGAAGCCAGGAGGTTCTGAGTAAGGTCTGCATAAAGAAATAATACCATAGTTTCCAATTGGCCAGTTTCGTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 90 bp | CAGTACTCCTTAAAACTGTCAAGATCACCAAAAACAAGGGAAGTCTaGGAAATGGTCACAGCCAAGAGCAGCATAAGGAGACATATTAAC | + |
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Preference number: 5 (lower is better) Translates to: QYSLKLSRSPKTREV*EMVTAKSSIRRHIN Trigger: GTTAATATGTCTCCTTATGCTGCTCTTGGCTGTGACCATTTCTCAGACTTCCCTTGTTTTTGGTGATCTTGACAGTTTTAAGGAGTACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS TCA 90 bp | ACACACAGCTTCTTATATGCACATGTATTTCTTTGCTCTGTGAGCTaGCAAGGTGTAAAAGAAATGACATCCAGTAGTAAGGAGCACACC | + |
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Preference number: 5 (lower is better) Translates to: THSFLYAHVFLCSVS*QGVKEMTSSSKEHT Trigger: GGTGTGCTCCTTACTACTGGATGTCATTTCTTTTACACCTTGTCAGCTCACAGAGCAAAGAAATACATGTGCATATAAGAAGCTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS GCA 90 bp | AAGATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTTACTTTTTAAGTGTTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: KMLEKCGMKLLLNCI*SISGSGHLLFKCCC Trigger: GCAACAACACTTAAAAAGTAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS TCA 90 bp | GTAAAAATGGCTTACAATGTAGTACGCAAGTGTCTTAGACACATGTaGACAAGAAGATGTGGAAACATTGAAGAAACAGCATCTAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VKMAYNVVRKCLRHM*TRRCGNIEETASSS Trigger: AGAACTAGATGCTGTTTCTTCAATGTTTCCACATCTTCTTGTTCACATGTGTCTAAGACACTTGCGTACTACATTGTAAGCCATTTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS TCA 90 bp | TTGTCTCATATCTGTGTTCGTTATCAGCGCAGTAAAGCCCGTAATTaGGCTTACAATCTTCTTCATAGTAAAAATGGCTTACAATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: LSHICVRYQRSKARN*AYNLLHSKNGLQCS Trigger: ACTACATTGTAAGCCATTTTTACTATGAAGAAGATTGTAAGCTCAATTACGGGCTTTACTGCGCTGATAACGAACACAGATATGAGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS TCA 90 bp | ATGTATTTAAGTATTGCCATTTTTAGGAAAGTGGTGTTCTATCAATaGCTTAATCATTCTAGGTTTTTGCCCAGCTGCAGATGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: MYLSIAIFRKVVFYQ*LNHSRFLPSCRWLE Trigger: CTCAAGCCATCTGCAGCTGGGCAAAAACCTAGAATGATTAAGTCATTGATAGAACACCACTTTCCTAAAAATGGCAATACTTAAATACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CCA 72 bp | CGACACAGGTGCCCAGGAGGGCACAAAACTGCCTTCTaGAGTGGACAGGAAGGTTCCACGCCATGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RHRCPGGHKTAF*SGQEGSTPWWW Trigger: CCACCACCATGGCGTGGAACCTTCCTGTCCACTCCAGAAGGCAGTTTTGTGCCCTCCTGGGCACCTGTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CCA 72 bp | CAGGTGCCCAGGAGGGCACAAAACTGCCTTCTGGAGTaGACAGGAAGGTTCCACGCCATGGTGGTGGTAACA | + |
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Preference number: 6 (lower is better) Translates to: QVPRRAQNCLLE*TGRFHAMVVVT Trigger: TGTTACCACCACCATGGCGTGGAACCTTCCTGTCCACTCCAGAAGGCAGTTTTGTGCCCTCCTGGGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | GGTGGATGTCTAAGTGTCTCTAGGCTGCGACACAGGTaGCCAGGAGGGCACAAAACTGCCTTCTGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGCLSVSRLRHR*PGGHKTAFWSG Trigger: TCCACTCCAGAAGGCAGTTTTGTGCCCTCCTGGGCACCTGTGTCGCAGCCTAGAGACACTTAGACATCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | CACATGATTGGTCTCTCTGGTGACCAGCCCCCATCCTaGAGCTATCTAGGTGCCTACCAAGAGTCCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HMIGLSGDQPPS*SYLGAYQESPH Trigger: ATGAGGGGACTCTTGGTAGGCACCTAGATAGCTTCAGGATGGGGGCTGGTCACCAGAGAGACCAATCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000634935.1 ENST00000640155.1 |
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| CDS TCA 72 bp | GTCCAGTGGGCCCAAAGTCCCAATCCTCTAATCACATaGTTGGTCTCTCTGGTGACCAGCCCCCATCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VQWAQSPNPLIT*LVSLVTSPHPE Trigger: TTCAGGATGGGGGCTGGTCACCAGAGAGACCAATCATGTGATTAGAGGATTGGGACTTTGGGCCCACTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634935.1 ENST00000640155.1 |
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| CDS GCA 72 bp | ATGGTGAGTTACAGTCAGTGTGAGTGTGCGTGGGCATaGACACTCAGTAAGCAGGCAGCAGCTGTTTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: MVSYSQCECAWA*TLSKQAAAVWL Trigger: TAACCAAACAGCTGCTGCCTGCTTACTGAGTGTGCATGCCCACGCACACTCACACTGACTGTAACTCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | TCTTTGCTCACCATCCTCGAGGCAGGAGCTCAAGTCTaGTTGTCTCATATCTGTGTTCGTTATCAGCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLLTILEAGAQV*LSHICVRYQRS Trigger: ACTGCGCTGATAACGAACACAGATATGAGACAAGCAGACTTGAGCTCCTGCCTCGAGGATGGTGAGCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS GCA 72 bp | TATGAAGCATACAGATCAGGAACGACAACTAAGAGATaGACAGGGCAAGGTCTTGAGTGGGGGCCAACGCTA | + |
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Preference number: 6 (lower is better) Translates to: YEAYRSGTTTKR*TGQGLEWGPTL Trigger: TAGCGTTGGCCCCCACTCAAGACCTTGCCCTGTGCATCTCTTAGTTGTCGTTCCTGATCTGTATGCTTCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634935.1 ENST00000640155.1 |
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| CDS GCA 72 bp | GAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTCCTCCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: EKCGMKLLLNCI*SISGSGHSSPQ Trigger: CTGTGGGGAGGAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CCA 72 bp | AACGCTAAGTTTCTATGTCCTCCCCTCATGAAATCCTaGTGTATCATCCCCCGGCTCATCAACGTGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: NAKFLCPPLMKS*CIIPRLINVFT Trigger: GGTGAACACGTTGATGAGCCGGGGGATGATACACCAGGATTTCATGAGGGGAGGACATAGAAACTTAGCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000634935.1 ENST00000640155.1 |
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| CDS CCA 72 bp | TTTTTGCCCAGCTGCAGATGGCTTGAGAGAACTGCCTaGTTACAGCTGATGGTGAGTTACAGTCAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FLPSCRWLERTA*LQLMVSYSQCE Trigger: CTCACACTGACTGTAACTCACCATCAGCTGTAACCAGGCAGTTCTCTCAAGCCATCTGCAGCTGGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 90 bp | TTAGGCTCTTTGCTCACCATCCTCGAGGCAGGAGCTCAAGTCTGCTaGTCTCATATCTGTGTTCGTTATCAGCGCAGTAAAGCCCGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LGSLLTILEAGAQVC*SHICVRYQRSKARN Trigger: ATTACGGGCTTTACTGCGCTGATAACGAACACAGATATGAGACAAGCAGACTTGAGCTCCTGCCTCGAGGATGGTGAGCAAAGAGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS TCA 72 bp | CAAGAACATGCTCTAGGAGGTAAAGGCAAAAGCCTCTaGATCATTTCCCCCTGTGAATCCGGTGAGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: QEHALGGKGKSL*IISPCESGEDS Trigger: ACTGTCCTCACCGGATTCACAGGGGGAAATGATTCAGAGGCTTTTGCCTTTACCTCCTAGAGCATGTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000451023.1 ENST00000635340.2 ENST00000638586.1 ENST00000639685.2 |
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| CDS GCA 72 bp | CACACATTTTGTGTCTTGTTTAACACTAATTCCCAATaGCTCCTCCCCACAGCAGGTAGAGCAGCAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: HTFCVLFNTNSQ*LLPTAGRAAGC Trigger: GCATCCTGCTGCTCTACCTGCTGTGGGGAGGAGGCATTGGGAATTAGTGTTAAACAAGACACAAAATGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS CCA 72 bp | ACTTACTTTTTAAGTGTTGTTGCCACGAAAGGAAGCTaGGTATCATCCACTCACCTCCTCCCCACAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TYFLSVVATKGS*VSSTHLLPTAG Trigger: ACCTGCTGTGGGGAGGAGGTGAGTGGATGATACCCAGCTTCCTTTCGTGGCAACAACACTTAAAAAGTAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS CAA 72 bp | TTGCTCACCATCCTCGAGGCAGGAGCTCAAGTCTGCTaGTCTCATATCTGTGTTCGTTATCAGCGCAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LLTILEAGAQVC*SHICVRYQRSK Trigger: TTTACTGCGCTGATAACGAACACAGATATGAGACAAGCAGACTTGAGCTCCTGCCTCGAGGATGGTGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS CAA 72 bp | TTGTGTTTCATTTCCTCTCAGTTTTGCTTAGGCTCTTaGCTCACCATCCTCGAGGCAGGAGCTCAAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LCFISSQFCLGS*LTILEAGAQVC Trigger: GCAGACTTGAGCTCCTGCCTCGAGGATGGTGAGCAAAGAGCCTAAGCAAAACTGAGAGGAAATGAAACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS CAA 72 bp | GCAGACCTTACTCAGAACCTCCTGGCTTCTGCAAGATaGGTCTGTGTTGTGAGTGAAGAGGTATGGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: ADLTQNLLASAR*VCVVSEEVWTR Trigger: TCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAGGTTCTGAGTAAGGTCTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 90 bp | TGTCTGACACTGGAAGGCCAAGTAGACACTGGAAGGCAAAGCCTTTaGAAAGTGTTTAGGTGCTTGAGTTCCAGCCACATCCCAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: CLTLEGQVDTGRQSL*KVFRCLSSSHIPIF Trigger: AAAGATTGGGATGTGGCTGGAACTCAAGCACCTAAACACTTTCAAAAGGCTTTGCCTTCCAGTGTCTACTTGGCCTTCCAGTGTCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000419428.2 ENST00000451023.1 ENST00000634635.1 ENST00000634935.1 ENST00000635340.2 ENST00000638586.1 ENST00000638593.1 ENST00000639685.2 ENST00000640155.1 ENST00000640493.1 ENST00000657699.1 ENST00000661268.1 |
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| CDS CAA 72 bp | GATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATaGCATCTGCAGCATATCAGGGAGTGGTCACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: DVGEMWNEAATQ*HLQHIREWSLL Trigger: GAGGAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | ATGGACAAGATTCTACCTTATGGAAATGAGGCTCTTTaGCTTGGTCTCTCCAGTTGGACTGAGCCACACATG | + |
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Preference number: 6 (lower is better) Translates to: MDKILPYGNEAL*LGLSSWTEPHM Trigger: CATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGTAGAATCTTGTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | AGAACCTCCTGGCTTCTGCAAGATTGGTCTGTGTTGTaGGTGAAGAGGTATGGACAAGATTCTACCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: RTSWLLQDWSVL*VKRYGQDSTLW Trigger: CCATAAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAGGTTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | ATGTTGAGACATCAGGCAACAAAGAAAAGTGATCACTaGGACATGGAAACAACACAGCTGAGCCCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: MLRHQATKKSDH*DMETTQLSPGT Trigger: AGTCCCAGGGCTCAGCTGTGTTGTTTCCATGTCTCAGTGATCACTTTTCTTTGTTGCCTGATGTCTCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | GCTCTGGCTGTGTTAACTTGCCACTTCTTAACTCTGTaGCTTATGGAAATGAGGCTCTTTGACTTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ALAVLTCHFLTL*LMEMRLFDLVS Trigger: AGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTTAACACAGCCAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS CAA 72 bp | TTAACTCTGTGCCTTATGGAAATGAGGCTCTTTGACTaGGTCTCTCCAGTTGGACTGAGCCACACATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTLCLMEMRLFD*VSPVGLSHTWF Trigger: AAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGCACAGAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS CAA 72 bp | GATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATaGCATCTGCAGCATATCAGGGAGTGGTCACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DVGEMWNEAATQ*HLQHIREWSLV Trigger: TACCAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS TCA 72 bp | CCTCCTGGCTTCTGCAAGATTGGTCTGTGTTGTGAGTaGAGAGGTATGGACAAGATTCTACCTTATGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PPGFCKIGLCCE*RGMDKILPYGN Trigger: ATTTCCATAAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | GAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTTTCTGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EKCGMKLLLNCI*SISGSGHFLFP Trigger: AGGAAACAGAAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS GCA 72 bp | TGGTGTTCTATCAATGACTTAATCATTCTAGGTTTTTaGCCAGCTGCAGATGGCTTGAGAGAACTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WCSINDLIILGF*PAADGLRELPG Trigger: ACCAGGCAGTTCTCTCAAGCCATCTGCAGCTGGGCAAAAACCTAGAATGATTAAGTCATTGATAGAACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | ATATCAGGGAGTGGTCACTTACTTTTTAAGTGTTGTTaGCACGAAAGGAAGCTGGGTATCATCCACTCACCT | + |
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Preference number: 6 (lower is better) Translates to: ISGSGHLLFKCC*HERKLGIIHSP Trigger: AGGTGAGTGGATGATACCCAGCTTCCTTTCGTGGCAACAACACTTAAAAAGTAAGTGACCACTCCCTGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS CAA 72 bp | GATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATaGCATCTGCAGCATATCAGGGAGTGGTCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DVGEMWNEAATQ*HLQHIREWSLS Trigger: AGAAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS CAA 72 bp | ACAAGATTCTACCTTATGGAAATGAGGCTCTTTGACTaGGTCTCTCCAGTTGGACTGAGCCACACATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TRFYLMEMRLFD*VSPVGLSHTWF Trigger: AAACCATGTGTGGCTCAGTCCAACTGGAGAGACCAAGTCAAAGAGCCTCATTTCCATAAGGTAGAATCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 72 bp | GATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATaGCATCTGCAGCATATCAGGGAGTGGTCACTTACT | + |
|
Preference number: 6 (lower is better) Translates to: DVGEMWNEAATQ*HLQHIREWSLT Trigger: AGTAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS CAA 90 bp | TTTCTTTATGCAGACCTTACTCAGAACCTCCTGGCTTCTGCAAGATaGGTCTGTGTTGTGAGTGAAGAGGTATGGACAAGATTCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: FLYADLTQNLLASAR*VCVVSEEVWTRFYL Trigger: AAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGAAGCCAGGAGGTTCTGAGTAAGGTCTGCATAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | GGTTCCTTACTGTTTGAGTGGGAGATGATAGGTAAGTaGGAGAATGATCCATGTGGTAATGGAGTAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GSLLFEWEMIGK*ENDPCGNGVEL Trigger: CAACTCTACTCCATTACCACATGGATCATTCTCTCACTTACCTATCATCTCCCACTCAAACAGTAAGGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS GCA 72 bp | AAGTTTTCTTCTGTGCATGCTCTGGCTGTGTTAACTTaGCACTTCTTAACTCTGTGCCTTATGGAAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: KFSSVHALAVLT*HFLTLCLMEMR Trigger: CCTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTTAACACAGCCAGAGCATGCACAGAAGAAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS GCA 72 bp | CGACGTAGAAATCTGTCTAATACTACTGAAGCCAAATaGTCAAGGTCAACCACACCCATAAGTCATGTGACA | + |
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Preference number: 6 (lower is better) Translates to: RRRNLSNTTEAK*SRSTTPISHVT Trigger: TGTCACATGACTTATGGGTGTGGTTGACCTTGAGCATTTGGCTTCAGTAGTATTAGACAGATTTCTACGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS CAA 72 bp | GAAGTTTTCTTCTGTGCATGCTCTGGCTGTGTTAACTaGCCACTTCTTAACTCTGTGCCTTATGGAAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVFFCACSGCVN*PLLNSVPYGNE Trigger: CTCATTTCCATAAGGCACAGAGTTAAGAAGTGGCAAGTTAACACAGCCAGAGCATGCACAGAAGAAAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000638593.1 ENST00000640155.1 ENST00000640493.1 |
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| CDS CAA 72 bp | GATGTTGGAGAAATGTGGAATGAAGCTGCTACTCAATaGCATCTGCAGCATATCAGGGAGTGGTCAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: DVGEMWNEAATQ*HLQHIREWSDF Trigger: AAAATCTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTCCAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634935.1 ENST00000640155.1 |
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| CDS TCA 72 bp | CCACACATGGTTTTGAATATGCTCTTGACCTCACCATaGAAGATGTTGGAGAAATGTGGAATGAAGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: PHMVLNMLLTSP*KMLEKCGMKLL Trigger: TAGCAGCTTCATTCCACATTTCTCCAACATCTTTCATGGTGAGGTCAAGAGCATATTCAAAACCATGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000419428.2 ENST00000634635.1 ENST00000634935.1 ENST00000635340.2 ENST00000638593.1 ENST00000639685.2 ENST00000640155.1 ENST00000640493.1 ENST00000657699.1 ENST00000661268.1 |
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| CDS TCA 72 bp | ACAGGAAGGTTCCACGCCATGGTGGTGGTAACATGGTaGTTTGGAGTTATAATGTGTTTTTGTTCATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TGRFHAMVVVTW*FGVIMCFCSFG Trigger: TCCAAATGAACAAAAACACATTATAACTCCAAATCACCATGTTACCACCACCATGGCGTGGAACCTTCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS TCA 72 bp | TTAAAACTGTCAAGATCACCAAAAACAAGGGAAGTCTaGGAAATGGTCACAGCCAAGAGCAGCATAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LKLSRSPKTREV*EMVTAKSSIRR Trigger: TCTCCTTATGCTGCTCTTGGCTGTGACCATTTCTCAGACTTCCCTTGTTTTTGGTGATCTTGACAGTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS GCA 72 bp | AACTGGCCAATTGGAAACTATGGTATTATTTCTTTATaGAGACCTTACTCAGAACCTCCTGGCTTCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: NWPIGNYGIISL*RPYSEPPGFCK Trigger: CTTGCAGAAGCCAGGAGGTTCTGAGTAAGGTCTGCATAAAGAAATAATACCATAGTTTCCAATTGGCCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS GCA 72 bp | GAGAAATGTGGAATGAAGCTGCTACTCAATTGCATCTaGAGCATATCAGGGAGTGGTCACTTACTTTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: EKCGMKLLLNCI*SISGSGHLLFK Trigger: CTTAAAAAGTAAGTGACCACTCCCTGATATGCTGCAGATGCAATTGAGTAGCAGCTTCATTCCACATTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657699.1 ENST00000661268.1 |
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| CDS CCA 72 bp | TCTGCAAGATTGGTCTGTGTTGTGAGTGAAGAGGTATaGACAAGATTCTACCTTATGGAAATGAGGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SARLVCVVSEEV*TRFYLMEMRLF Trigger: AAAGAGCCTCATTTCCATAAGGTAGAATCTTGTCCATACCTCTTCACTCACAACACAGACCAATCTTGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 90 bp | TACGCAAGTGTCTTAGACACATGTGAACAAGAAGATGTGGAAACATaGAAGAAACAGCATCTAGTTCTGCTTGAGAGACTTGAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: YASVLDTCEQEDVET*KKQHLVLLERLEGG Trigger: TCCACCTTCAAGTCTCTCAAGCAGAACTAGATGCTGTTTCTTCAATGTTTCCACATCTTCTTGTTCACATGTGTCTAAGACACTTGCGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS CAA 90 bp | AGTAAGCAGGCAGCAGCTGTTTGGTTAGAGAACGAAACTGGCCAATaGGAAACTATGGTATTATTTCTTTATGCAGACCTTACTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SKQAAAVWLENETGQ*ETMVLFLYADLTQN Trigger: GTTCTGAGTAAGGTCTGCATAAAGAAATAATACCATAGTTTCCAATTGGCCAGTTTCGTTCTCTAACCAAACAGCTGCTGCCTGCTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 72 bp | GCAGCAGCTGTTTGGTTAGAGAACGAAACTGGCCAATaGGAAACTATGGTATTATTTCTTTATGCAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAAVWLENETGQ*ETMVLFLYADL Trigger: AAGGTCTGCATAAAGAAATAATACCATAGTTTCCAATTGGCCAGTTTCGTTCTCTAACCAAACAGCTGCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CCA 72 bp | TGCAAAATAACTAGACATTCTGTTAGTAACAGAGTTTaGCCAGATAAGACTAGCCCAACAGTTGCAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: CKITRHSVSNRV*PDKTSPTVART Trigger: TGTTCTTGCAACTGTTGGGCTAGTCTTATCTGGCCAAACTCTGTTACTAACAGAATGTCTAGTTATTTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451023.1 ENST00000635340.2 ENST00000638586.1 ENST00000639685.2 |
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| CDS CAA 72 bp | GTCTTAGACACATGTGAACAAGAAGATGTGGAAACATaGAAGAAACAGCATCTAGTTCTGCTTGAGAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: VLDTCEQEDVET*KKQHLVLLERL Trigger: AAGTCTCTCAAGCAGAACTAGATGCTGTTTCTTCAATGTTTCCACATCTTCTTGTTCACATGTGTCTAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419428.2 ENST00000638593.1 |
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| CDS TCA 72 bp | AGTATTGCCATTTTTAGGAAAGTGGTGTTCTATCAATaGCTTAATCATTCTAGGTTTTTGCCCAGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SIAIFRKVVFYQ*LNHSRFLPSCR Trigger: TCTGCAGCTGGGCAAAAACCTAGAATGATTAAGTCATTGATAGAACACCACTTTCCTAAAAATGGCAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000635340.2 ENST00000639685.2 |
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| CDS CAA 90 bp | GCAGCATATCAGGGAGTGGTCACTGGTAGTTATAATTTCATCAGCTaGTTTTATTTTCTTCATGGCACAAACTGTGTATTTATTGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: AAYQGVVTGSYNFIS*FYFLHGTNCVFIGF Trigger: AAATCCAATAAATACACAGTTTGTGCCATGAAGAAAATAAAACAAGCTGATGAAATTATAACTACCAGTGACCACTCCCTGATATGCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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| CDS TCA 72 bp | TTCTTATATGCACATGTATTTCTTTGCTCTGTGAGCTaGCAAGGTGTAAAAGAAATGACATCCAGTAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLYAHVFLCSVS*QGVKEMTSSSK Trigger: CTTACTACTGGATGTCATTTCTTTTACACCTTGTCAGCTCACAGAGCAAAGAAATACATGTGCATATAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634635.1 ENST00000640493.1 |
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