Pregenerated sensors for LINC02784 (Homo sapiens)
Ensembl gene IDs: ENSG00000235741Ensembl transcript IDs: ENST00000433377.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGAGCCCAGGGAGAGGAGGCCTGAGAGAGGAGGTGAGAGTCCCTTaGAGGGAGCTGCAACGGCTCATGTGGGCTTCCCAGCCCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RSPGRGGLREEVRVP*RELQRLMWASQPSL Trigger: GAGGCTGGGCTGGGAAGCCCACATGAGCCGTTGCAGCTCCCTGCAAGGGACTCTCACCTCCTCTCTCAGGCCTCCTCTCCCTGGGCTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CCA 90 bp | CTGCCTGGCACAGAGGGTGCCTCAGAACCAACTCATGGAGTGAGGTaGCTGCTGACTGGGCTAGTCCCTTCCCAGGGAGAATGGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: LPGTEGASEPTHGVR*LLTGLVPSQGEWHF Trigger: GAAATGCCATTCTCCCTGGGAAGGGACTAGCCCAGTCAGCAGCCACCTCACTCCATGAGTTGGTTCTGAGGCACCCTCTGTGCCAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CCA 90 bp | ATGGCTGTGAGGTTGGATCTAATTCACCTTGTGTCCCGAGCTGCCTaGCACAGAGGGTGCCTCAGAACCAACTCATGGAGTGAGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: MAVRLDLIHLVSRAA*HRGCLRTNSWSEVA Trigger: AGCCACCTCACTCCATGAGTTGGTTCTGAGGCACCCTCTGTGCCAGGCAGCTCGGGACACAAGGTGAATTAGATCCAACCTCACAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS TCA 90 bp | GCAGAGGGAGGGAACCTAGAGCAGAAAGTGCTTGGGCTCTCCATCTaGCAGCCCGTTCAAATGCTTGCTCTTCTGGTGACAGAGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: AEGGNLEQKVLGLSI*QPVQMLALLVTESV Trigger: CACAGACTCTGTCACCAGAAGAGCAAGCATTTGAACGGGCTGTCAGATGGAGAGCCCAAGCACTTTCTGCTCTAGGTTCCCTCCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS TCA 90 bp | GAATATATGAGTCATCTGACTTGTGGTCTTCTGTTATCACTTAGGTaGATGGATATGACAGTAGCTAAAAGGAGAGGCTGGAAGAGATTA | + |
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Preference number: 5 (lower is better) Translates to: EYMSHLTCGLLLSLR*MDMTVAKRRGWKRL Trigger: TAATCTCTTCCAGCCTCTCCTTTTAGCTACTGTCATATCCATTCACCTAAGTGATAACAGAAGACCACAAGTCAGATGACTCATATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS GCA 72 bp | GGGAGAGGAGGCCTGAGAGAGGAGGTGAGAGTCCCTTaGAGGGAGCTGCAACGGCTCATGTGGGCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRGGLREEVRVP*RELQRLMWASQ Trigger: CTGGGAAGCCCACATGAGCCGTTGCAGCTCCCTGCAAGGGACTCTCACCTCCTCTCTCAGGCCTCCTCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CCA 72 bp | ACAGAGGGTGCCTCAGAACCAACTCATGGAGTGAGGTaGCTGCTGACTGGGCTAGTCCCTTCCCAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TEGASEPTHGVR*LLTGLVPSQGE Trigger: TTCTCCCTGGGAAGGGACTAGCCCAGTCAGCAGCCACCTCACTCCATGAGTTGGTTCTGAGGCACCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CAA 90 bp | GTGACAGAGTCTGTGTCACTCTGTCTGCCTCACATGGCTGTGAGGTaGGATCTAATTCACCTTGTGTCCCGAGCTGCCTGGCACAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VTESVSLCLPHMAVR*DLIHLVSRAAWHRG Trigger: CCCTCTGTGCCAGGCAGCTCGGGACACAAGGTGAATTAGATCCAACCTCACAGCCATGTGAGGCAGACAGAGTGACACAGACTCTGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS GCA 72 bp | TGTGAGGTTGGATCTAATTCACCTTGTGTCCCGAGCTaGCTGGCACAGAGGGTGCCTCAGAACCAACTCATG | + |
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Preference number: 6 (lower is better) Translates to: CEVGSNSPCVPS*LAQRVPQNQLM Trigger: CATGAGTTGGTTCTGAGGCACCCTCTGTGCCAGGCAGCTCGGGACACAAGGTGAATTAGATCCAACCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CCA 72 bp | AGGTTGGATCTAATTCACCTTGTGTCCCGAGCTGCCTaGCACAGAGGGTGCCTCAGAACCAACTCATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RLDLIHLVSRAA*HRGCLRTNSWS Trigger: ACTCCATGAGTTGGTTCTGAGGCACCCTCTGTGCCAGGCAGCTCGGGACACAAGGTGAATTAGATCCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CAA 72 bp | TCTGTGTCACTCTGTCTGCCTCACATGGCTGTGAGGTaGGATCTAATTCACCTTGTGTCCCGAGCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SVSLCLPHMAVR*DLIHLVSRAAW Trigger: CCAGGCAGCTCGGGACACAAGGTGAATTAGATCCAACCTCACAGCCATGTGAGGCAGACAGAGTGACACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CAA 90 bp | GCTAGTCCCTTCCCAGGGAGAATGGCATTTCTGTTAGAGTCCCAGTaGCATGTCTCTCTCTTCTATCCATCTTCTTTCTCATCAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: ASPFPGRMAFLLESQ*HVSLFYPSSFSSVF Trigger: GAATACTGATGAGAAAGAAGATGGATAGAAGAGAGAGACATGCAACTGGGACTCTAACAGAAATGCCATTCTCCCTGGGAAGGGACTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS CAA 72 bp | TTCCCAGGGAGAATGGCATTTCTGTTAGAGTCCCAGTaGCATGTCTCTCTCTTCTATCCATCTTCTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: FPGRMAFLLESQ*HVSLFYPSSFS Trigger: TGAGAAAGAAGATGGATAGAAGAGAGAGACATGCAACTGGGACTCTAACAGAAATGCCATTCTCCCTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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| CDS TCA 72 bp | AGTCATCTGACTTGTGGTCTTCTGTTATCACTTAGGTaGATGGATATGACAGTAGCTAAAAGGAGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SHLTCGLLLSLR*MDMTVAKRRGW Trigger: CCAGCCTCTCCTTTTAGCTACTGTCATATCCATTCACCTAAGTGATAACAGAAGACCACAAGTCAGATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433377.1 |
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