Pregenerated sensors for LINC02781 (Homo sapiens)
Ensembl gene IDs: ENSG00000284674Ensembl transcript IDs: ENST00000641403.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGCCGCCCCACGTGCGTCTTCCTCCTGGGTGGAAACGCGGCAGCTaGGGTGACTTGCAGAGGCTCTCGCTTGCGTTCCTGGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VPPHVRLPPGWKRGS*GDLQRLSLAFLGSS Trigger: GGAGGAGCCCAGGAACGCAAGCGAGAGCCTCTGCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | CTCCGTCTATCTCTCGTGCCGCCCCACGTGCGTCTTCCTCCTGGGTaGAAACGCGGCAGCTGGGGTGACTTGCAGAGGCTCTCGCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: LRLSLVPPHVRLPPG*KRGSWGDLQRLSLA Trigger: CGCAAGCGAGAGCCTCTGCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCACGAGAGATAGACGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 90 bp | GGCTACTTCTTTCAATCCTCCGTCTATCTCTCGTGCCGCCCCACGTaGGTCTTCCTCCTGGGTGGAAACGCGGCAGCTGGGGTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GYFFQSSVYLSCRPT*VFLLGGNAAAGVTC Trigger: GCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCACGAGAGATAGACGGAGGATTGAAAGAAGTAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | TGCATCCACCCAGCTGCCCCTCCTCAGGGAGCTGGCACTGTCTTCTaGGTCAGTCCAATCTGTGGTCAGCTCCCAGGACTGACCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CIHPAAPPQGAGTVF*VSPICGQLPGLTFL Trigger: AAGGAAGGTCAGTCCTGGGAGCTGACCACAGATTGGACTGACCCAGAAGACAGTGCCAGCTCCCTGAGGAGGGGCAGCTGGGTGGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 90 bp | GCTCCACCTGTGTGTCTTGGGAGTTCTCCCAGGCAGCCCCACCAATaGGCCTTTCCCTGTGCAGAGTCCCTTCTGGTAAGTCTCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: APPVCLGSSPRQPHQ*AFPCAESLLVSLSE Trigger: CTCACTGAGACTTACCAGAAGGGACTCTGCACAGGGAAAGGCTCATTGGTGGGGCTGCCTGGGAGAACTCCCAAGACACACAGGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | TGGGGTGACTTGCAGAGGCTCTCGCTTGCGTTCCTGGGCTCCTCCTaGGATAGGGAGAAGGGTCTTCAGGCTTGTCACAGTCCCTATGAT | + |
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Preference number: 5 (lower is better) Translates to: WGDLQRLSLAFLGSS*DREKGLQACHSPYD Trigger: ATCATAGGGACTGTGACAAGCCTGAAGACCCTTCTCCCTATCCCAGGAGGAGCCCAGGAACGCAAGCGAGAGCCTCTGCAAGTCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 90 bp | CGGGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTTGGTGGATaGACCAGCAGGTGCTCGCCCCATCCGAGCTGTCTACTCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: RVLGSHSWAMFIFGG*TSRCSPHPSCLLTC Trigger: GCAAGTGAGTAGACAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 90 bp | GCTGGTACCAAAAAGAGGGATTGGCATTCACTGCATCCACCCAGCTaGCCCTCCTCAGGGAGCTGGCACTGTCTTCTGGGTCAGTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: AGTKKRDWHSLHPPS*PSSGSWHCLLGQSN Trigger: ATTGGACTGACCCAGAAGACAGTGCCAGCTCCCTGAGGAGGGGCAGCTGGGTGGATGCAGTGAATGCCAATCCCTCTTTTTGGTACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 90 bp | CTGGGTCAGTCCAATCTGTGGTCAGCTCCCAGGACTGACCTTCCTTaGCCCATCAGCATCGTGTGTCCTGGCTCATCTTATCTGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LGQSNLWSAPRTDLP*PISIVCPGSSYLAH Trigger: GTGAGCCAGATAAGATGAGCCAGGACACACGATGCTGATGGGTCAAGGAAGGTCAGTCCTGGGAGCTGACCACAGATTGGACTGACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | ATTTCGGGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTTGGTaGATGAACCAGCAGGTGCTCGCCCCATCCGAGCTGTCTACTCAC | + |
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Preference number: 5 (lower is better) Translates to: ISGLGVSLLGHVHIW*MNQQVLAPSELSTH Trigger: GTGAGTAGACAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | GCAATTTCGGGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTTaGTGGATGAACCAGCAGGTGCTCGCCCCATCCGAGCTGTCTACT | + |
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Preference number: 5 (lower is better) Translates to: AISGLGVSLLGHVHI*WMNQQVLAPSELST Trigger: AGTAGACAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 90 bp | CTCACTTGCCCGAGTCCAAGCAAAAGTCCCAGGGGTTCTGGGAGGTaGTGTGATTGCTCTGGTGGAGTATGGTTGTTTCTGATAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LTCPSPSKSPRGSGR*CDCSGGVWLFLIAL Trigger: CAGTGCTATCAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACCCCTGGGACTTTTGCTTGGACTCGGGCAAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 90 bp | CCGAGTCCAAGCAAAAGTCCCAGGGGTTCTGGGAGGTGCTGTGATTaGTCTGGTGGAGTATGGTTGTTTCTGATAGCACTGTTCTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PSPSKSPRGSGRCCD*SGGVWLFLIALFLQ Trigger: TTGCAAGAACAGTGCTATCAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACCCCTGGGACTTTTGCTTGGACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | ACCTTCCTTGACCCATCAGCATCGTGTGTCCTGGCTCATCTTATCTaGCTCACTGGCTACTTCTTTCAATCCTCCGTCTATCTCTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: TFLDPSASCVLAHLI*LTGYFFQSSVYLSC Trigger: GCACGAGAGATAGACGGAGGATTGAAAGAAGTAGCCAGTGAGCCAGATAAGATGAGCCAGGACACACGATGCTGATGGGTCAAGGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | AGTCCCAGGGGTTCTGGGAGGTGCTGTGATTGCTCTGGTGGAGTATaGTTGTTTCTGATAGCACTGTTCTTGCAAAGCTCTTCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SPRGSGRCCDCSGGV*LFLIALFLQSSSLQ Trigger: CTGAAGTGAAGAGCTTTGCAAGAACAGTGCTATCAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACCCCTGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 90 bp | TTGGAATTCGGCTCAAAAGCTTCAGTTAGGATTTCCGATGATGGATaGAGACGCGAGATAATTGCTCCATACTTGGCCTTCGGGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LEFGSKASVRISDDG*RREIIAPYLAFGKG Trigger: GCCTTTCCCGAAGGCCAAGTATGGAGCAATTATCTCGCGTCTTCATCCATCATCGGAAATCCTAACTGAAGCTTTTGAGCCGAATTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | GGCATTTTCTTGTATAGCTATAGTCATTGGTGCAATTTCGGGTCTTaGGGTCTCACTCTTGGGCCATGTTCATATTTGGTGGATGAACCA | + |
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Preference number: 5 (lower is better) Translates to: GIFLYSYSHWCNFGS*GLTLGPCSYLVDEP Trigger: TGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGCACCAATGACTATAGCTATACAAGAAAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 90 bp | AATGAGAAGAAGTTTATGCAAAGCTCCTTTCTGCCACTTCCTGGCTaGACATTCGAGGATGGAAGTCTCACTTTGTTGTTTCACATCAAT | + |
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Preference number: 5 (lower is better) Translates to: NEKKFMQSSFLPLPG*TFEDGSLTLLFHIN Trigger: ATTGATGTGAAACAACAAAGTGAGACTTCCATCCTCGAATGTGCAGCCAGGAAGTGGCAGAAAGGAGCTTTGCATAAACTTCTTCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 90 bp | AGGATGGAAGTCTCACTTTGTTGTTTCACATCAATGAGGGTTCCTTaGATGAAAGCCTTAGAAACTGACCAGCTGATTAAAGCTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: RMEVSLCCFTSMRVP*MKALETDQLIKALL Trigger: CAGAAGAGCTTTAATCAGCTGGTCAGTTTCTAAGGCTTTCATCCAAGGAACCCTCATTGATGTGAAACAACAAAGTGAGACTTCCATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | TCTCTCGTGCCGCCCCACGTGCGTCTTCCTCCTGGGTaGAAACGCGGCAGCTGGGGTGACTTGCAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLVPPHVRLPPG*KRGSWGDLQRL Trigger: GAGCCTCTGCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCACGAGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | TTCCTCCTGGGTGGAAACGCGGCAGCTGGGGTGACTTaGAGAGGCTCTCGCTTGCGTTCCTGGGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLLGGNAAAGVT*RGSRLRSWAPP Trigger: AGGAGGAGCCCAGGAACGCAAGCGAGAGCCTCTGCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | CACGTGCGTCTTCCTCCTGGGTGGAAACGCGGCAGCTaGGGTGACTTGCAGAGGCTCTCGCTTGCGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HVRLPPGWKRGS*GDLQRLSLAFL Trigger: CAGGAACGCAAGCGAGAGCCTCTGCAAGTCACCCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | TTTCAATCCTCCGTCTATCTCTCGTGCCGCCCCACGTaGGTCTTCCTCCTGGGTGGAAACGCGGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FQSSVYLSCRPT*VFLLGGNAAAG Trigger: CCCAGCTGCCGCGTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCACGAGAGATAGACGGAGGATTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 72 bp | TCTGGGTCAGTCCAATCTGTGGTCAGCTCCCAGGACTaGCCTTCCTTGACCCATCAGCATCGTGTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSVQSVVSSQD*PSLTHQHRVSW Trigger: CCAGGACACACGATGCTGATGGGTCAAGGAAGGTCAGTCCTGGGAGCTGACCACAGATTGGACTGACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | ACTGGCTACTTCTTTCAATCCTCCGTCTATCTCTCGTaGCGCCCCACGTGCGTCTTCCTCCTGGGTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: TGYFFQSSVYLS*RPTCVFLLGGN Trigger: GTTTCCACCCAGGAGGAAGACGCACGTGGGGCGGCACGAGAGATAGACGGAGGATTGAAAGAAGTAGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | CTTGGGGTCTCACTCTTGGGCCATGTTCATATTTGGTaGATGAACCAGCAGGTGCTCGCCCCATCCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGVSLLGHVHIW*MNQQVLAPSEL Trigger: CAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | GGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTTaGTGGATGAACCAGCAGGTGCTCGCCCCATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLGVSLLGHVHI*WMNQQVLAPSE Trigger: CTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 72 bp | GGGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTaGGTGGATGAACCAGCAGGTGCTCGCCCCATCCGA | + |
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Preference number: 6 (lower is better) Translates to: GSWGLTLGPCSY*VDEPAGARPIR Trigger: TCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 72 bp | GGGTCTCACTCTTGGGCCATGTTCATATTTGGTGGATaGACCAGCAGGTGCTCGCCCCATCCGAGCTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: GSHSWAMFIFGG*TSRCSPHPSCL Trigger: TAGACAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 90 bp | TGCAATTTCGGGTCTTGGGGTCTCACTCTTGGGCCATGTTCATATTaGGTGGATGAACCAGCAGGTGCTCGCCCCATCCGAGCTGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: CNFGSWGLTLGPCSY*VDEPAGARPIRAVY Trigger: GTAGACAGCTCGGATGGGGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | CCGAGTCCAAGCAAAAGTCCCAGGGGTTCTGGGAGGTaGTGTGATTGCTCTGGTGGAGTATGGTTGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSPSKSPRGSGR*CDCSGGVWLFL Trigger: CAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACCCCTGGGACTTTTGCTTGGACTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 72 bp | TCCAATCTGTGGTCAGCTCCCAGGACTGACCTTCCTTaGCCCATCAGCATCGTGTGTCCTGGCTCATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SNLWSAPRTDLP*PISIVCPGSSY Trigger: ATAAGATGAGCCAGGACACACGATGCTGATGGGTCAAGGAAGGTCAGTCCTGGGAGCTGACCACAGATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | AGCAAAAGTCCCAGGGGTTCTGGGAGGTGCTGTGATTaGTCTGGTGGAGTATGGTTGTTTCTGATAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SKSPRGSGRCCD*SGGVWLFLIAL Trigger: CAGTGCTATCAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACCCCTGGGACTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 90 bp | ATAGCTATAGTCATTGGTGCAATTTCGGGTCTTGGGGTCTCACTCTaGGGCCATGTTCATATTTGGTGGATGAACCAGCAGGTGCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: IAIVIGAISGLGVSL*GHVHIWWMNQQVLA Trigger: GGCGAGCACCTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGCACCAATGACTATAGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | AGCATCGTGTGTCCTGGCTCATCTTATCTGGCTCACTaGCTACTTCTTTCAATCCTCCGTCTATCTCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: SIVCPGSSYLAH*LLLSILRLSLV Trigger: CACGAGAGATAGACGGAGGATTGAAAGAAGTAGCCAGTGAGCCAGATAAGATGAGCCAGGACACACGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 72 bp | GTCATTGGTGCAATTTCGGGTCTTGGGGTCTCACTCTaGGGCCATGTTCATATTTGGTGGATGAACCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VIGAISGLGVSL*GHVHIWWMNQQ Trigger: CTGCTGGTTCATCCACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGCACCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | GGTTCTGGGAGGTGCTGTGATTGCTCTGGTGGAGTATaGTTGTTTCTGATAGCACTGTTCTTGCAAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGRCCDCSGGV*LFLIALFLQSS Trigger: AGAGCTTTGCAAGAACAGTGCTATCAGAAACAACCATACTCCACCAGAGCAATCACAGCACCTCCCAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 72 bp | CCTGGCTGCACATTCGAGGATGGAAGTCTCACTTTGTaGTTTCACATCAATGAGGGTTCCTTGGATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PGCTFEDGSLTL*FHINEGSLDES Trigger: GCTTTCATCCAAGGAACCCTCATTGATGTGAAACAACAAAGTGAGACTTCCATCCTCGAATGTGCAGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS TCA 72 bp | GGCTCAAAAGCTTCAGTTAGGATTTCCGATGATGGATaGAGACGCGAGATAATTGCTCCATACTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSKASVRISDDG*RREIIAPYLAF Trigger: GAAGGCCAAGTATGGAGCAATTATCTCGCGTCTTCATCCATCATCGGAAATCCTAACTGAAGCTTTTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | TTGTCCAGTGGCATTTTCTTGTATAGCTATAGTCATTaGTGCAATTTCGGGTCTTGGGGTCTCACTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LSSGIFLYSYSH*CNFGSWGLTLG Trigger: CCCAAGAGTGAGACCCCAAGACCCGAAATTGCACCAATGACTATAGCTATACAAGAAAATGCCACTGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 72 bp | CTTCCTGGCTGCACATTCGAGGATGGAAGTCTCACTTaGTTGTTTCACATCAATGAGGGTTCCTTGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: LPGCTFEDGSLT*LFHINEGSLDE Trigger: TTCATCCAAGGAACCCTCATTGATGTGAAACAACAAAGTGAGACTTCCATCCTCGAATGTGCAGCCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS GCA 72 bp | AAGTTTATGCAAAGCTCCTTTCTGCCACTTCCTGGCTaGACATTCGAGGATGGAAGTCTCACTTTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KFMQSSFLPLPG*TFEDGSLTLLF Trigger: AAACAACAAAGTGAGACTTCCATCCTCGAATGTGCAGCCAGGAAGTGGCAGAAAGGAGCTTTGCATAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | TTGTATAGCTATAGTCATTGGTGCAATTTCGGGTCTTaGGGTCTCACTCTTGGGCCATGTTCATATTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LYSYSHWCNFGS*GLTLGPCSYLV Trigger: CACCAAATATGAACATGGCCCAAGAGTGAGACCCCAAGACCCGAAATTGCACCAATGACTATAGCTATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CCA 72 bp | GTCTCACTTTGTTGTTTCACATCAATGAGGGTTCCTTaGATGAAAGCCTTAGAAACTGACCAGCTGATTAAA | + |
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Preference number: 6 (lower is better) Translates to: VSLCCFTSMRVP*MKALETDQLIK Trigger: TTTAATCAGCTGGTCAGTTTCTAAGGCTTTCATCCAAGGAACCCTCATTGATGTGAAACAACAAAGTGAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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| CDS CAA 72 bp | AAGAAACCTCTGCAAAATTTGTCCAGTGGCATTTTCTaGTATAGCTATAGTCATTGGTGCAATTTCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KKPLQNLSSGIF*YSYSHWCNFGS Trigger: AGACCCGAAATTGCACCAATGACTATAGCTATACAAGAAAATGCCACTGGACAAATTTTGCAGAGGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641403.1 |
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