Pregenerated sensors for LINC02780 (Homo sapiens)
Ensembl gene IDs: ENSG00000284668Ensembl transcript IDs: ENST00000641078.1, ENST00000641562.1, ENST00000642026.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCACCCAACTTCTTGGCCAAGGTCGTCAGTTACCTCCACGCTGCTaGCGACGGTGGCCCACGCCAGGTTCTCAGCAGCAGCCCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ATQLLGQGRQLPPRC*RRWPTPGSQQQPAA Trigger: GGCTGCGGGCTGCTGCTGAGAACCTGGCGTGGGCCACCGTCGTCAGCAGCGTGGAGGTAACTGACGACCTTGGCCAAGAAGTTGGGTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641078.1 ENST00000641562.1 |
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| CDS TCA 90 bp | GATCTTCATCGTTGTCGTCTTCACATTGAGGAACCTCCACGCTGCTaGCGACGGTGGCCCACGCCAGGTTCTCAGCAGCAGCCCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: DLHRCRLHIEEPPRC*RRWPTPGSQQQPAA Trigger: GGCTGCGGGCTGCTGCTGAGAACCTGGCGTGGGCCACCGTCGTCAGCAGCGTGGAGGTTCCTCAATGTGAAGACGACAACGATGAAGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642026.2 |
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| CDS GCA 90 bp | CTGCAGGGCCCAGAAGCCTGCCTGGGGCTGATGGAGTCAGCCTGCTaGCTCCCGCTTAGGGGATTTCTGCGAAAGGCTGATTCTCAACAT | + |
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Preference number: 5 (lower is better) Translates to: LQGPEACLGLMESAC*LPLRGFLRKADSQH Trigger: ATGTTGAGAATCAGCCTTTCGCAGAAATCCCCTAAGCGGGAGGCAGCAGGCTGACTCCATCAGCCCCAGGCAGGCTTCTGGGCCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS GCA 90 bp | CGTCACACCTTTCTGCTTTGCCATGCACTTCTGTGGTCACTCCTTTaGTCAGGGTCACTGCGTGTGGCCACACAGGTGGGCCCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: RHTFLLCHALLWSLL*SGSLRVATQVGPAQ Trigger: CTGTGCAGGGCCCACCTGTGTGGCCACACGCAGTGACCCTGAGCAAAGGAGTGACCACAGAAGTGCATGGCAAAGCAGAAAGGTGTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS GCA 90 bp | TTTCCTCCCGCGTCCTCCAAGACGTCACACCTTTCTGCTTTGCCATaGACTTCTGTGGTCACTCCTTTGCTCAGGGTCACTGCGTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: FPPASSKTSHLSALP*TSVVTPLLRVTACG Trigger: GCCACACGCAGTGACCCTGAGCAAAGGAGTGACCACAGAAGTGCATGGCAAAGCAGAAAGGTGTGACGTCTTGGAGGACGCGGGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS TCA 90 bp | CTCCGAGCCATCAAGCCCTGTGCTTGTCCTCATGCTGATGTCCTCTaGGCTGTCAGAAGCATCCAGGGTGCAGCTGATTCTCGAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: LRAIKPCACPHADVL*AVRSIQGAADSRRT Trigger: TGTTCTTCGAGAATCAGCTGCACCCTGGATGCTTCTGACAGCTCAGAGGACATCAGCATGAGGACAAGCACAGGGCTTGATGGCTCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CCA 90 bp | GGTGGGCCCTGCACAGTTCCAGGGGTGCGATTCACATGGCAATCATaGCAGAAGGCAAAGAAGAAACAAGCACCTTCTTCACAAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GGPCTVPGVRFTWQS*QKAKKKQAPSSQGS Trigger: GCTGCCTTGTGAAGAAGGTGCTTGTTTCTTCTTTGCCTTCTGCCATGATTGCCATGTGAATCGCACCCCTGGAACTGTGCAGGGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS CCA 90 bp | GGCCACACAGGTGGGCCCTGCACAGTTCCAGGGGTGCGATTCACATaGCAATCATGGCAGAAGGCAAAGAAGAAACAAGCACCTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GHTGGPCTVPGVRFT*QSWQKAKKKQAPSS Trigger: TGAAGAAGGTGCTTGTTTCTTCTTTGCCTTCTGCCATGATTGCCATGTGAATCGCACCCCTGGAACTGTGCAGGGCCCACCTGTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS TCA 90 bp | TTCAGGCACAGACAGGCCCAGTGGTTGCACGGCTGGCCGCTATGGTaGGACGTCTTCAATTACAAGATATGTCCTGATTTTGGAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: FRHRQAQWLHGWPLW*DVFNYKICPDFGDV Trigger: GACATCTCCAAAATCAGGACATATCTTGTAATTGAAGACGTCTCACCATAGCGGCCAGCCGTGCAACCACTGGGCCTGTCTGTGCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 90 bp | AAGGATCTCCAGATGAGATTTATCCAGGATTATCCAGATGGACTCTaGCTGTGCCTGCTGGAAGGAGAAGACGGTGTCCATGCTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: KDLQMRFIQDYPDGL*LCLLEGEDGVHAPR Trigger: CCGAGGAGCATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTGGAGATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS CCA 90 bp | TCTGGTGAAGGATCTCCAGATGAGATTTATCCAGGATTATCCAGATaGACTCTGACTGTGCCTGCTGGAAGGAGAAGACGGTGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: SGEGSPDEIYPGLSR*TLTVPAGRRRRCPC Trigger: GCATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTGGAGATCCTTCACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS CCA 90 bp | TCTGGTGAAGGATCTCCAGATGAGATTTATCCAGGATTATCCAGATaGACTCTGACTGCAATAACAAGTGTCTCTGAGCATGACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SGEGSPDEIYPGLSR*TLTAITSVSEHDLH Trigger: GTGGAGGTCATGCTCAGAGACACTTGTTATTGCAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTGGAGATCCTTCACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | CCCACGCCAGGTTCTCAGCAGCAGCCCGCAGCCGCGTaGTGGCTCCTGTCCGCTGGGCGTGCTTTCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PTPGSQQQPAAA*WLLSAGRAFLP Trigger: CGGGAGGAAAGCACGCCCAGCGGACAGGAGCCATCACGCGGCTGCGGGCTGCTGCTGAGAACCTGGCGTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS CCA 72 bp | GCAGCAGCCCGCAGCCGCGTGATGGCTCCTGTCCGCTaGGCGTGCTTTCCTCCCGCGTCCTCCAAGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: AAARSRVMAPVR*ACFPPASSKTS Trigger: TGACGTCTTGGAGGACGCGGGAGGAAAGCACGCCCAGCGGACAGGAGCCATCACGCGGCTGCGGGCTGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS GCA 72 bp | CTGACTGTGCCTGCTGGAAGGAGAAGACGGTGTCCATaGTCCTCGGCTCCCCGGACCACCCCACAGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LTVPAGRRRRCP*SSAPRTTPQGG Trigger: GCCACCCTGTGGGGTGGTCCGGGGAGCCGAGGAGCATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS GCA 72 bp | GGCCCAGAAGCCTGCCTGGGGCTGATGGAGTCAGCCTaGTGCCTCCCGCTTAGGGGATTTCTGCGAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GPEACLGLMESA*CLPLRGFLRKA Trigger: AGCCTTTCGCAGAAATCCCCTAAGCGGGAGGCAGCAGGCTGACTCCATCAGCCCCAGGCAGGCTTCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | CTTCTTGGCCAAGGTCGTCAGTTACCTCCACGCTGCTaGCGACGGTGGCCCACGCCAGGTTCTCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGQGRQLPPRC*RRWPTPGSQQQ Trigger: CTGCTGCTGAGAACCTGGCGTGGGCCACCGTCGTCAGCAGCGTGGAGGTAACTGACGACCTTGGCCAAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641078.1 ENST00000641562.1 |
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| CDS TCA 72 bp | CGTTGTCGTCTTCACATTGAGGAACCTCCACGCTGCTaGCGACGGTGGCCCACGCCAGGTTCTCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RCRLHIEEPPRC*RRWPTPGSQQQ Trigger: CTGCTGCTGAGAACCTGGCGTGGGCCACCGTCGTCAGCAGCGTGGAGGTTCCTCAATGTGAAGACGACAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642026.2 |
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| CDS GCA 72 bp | CTCAGGGTCACTGCGTGTGGCCACACAGGTGGGCCCTaGACAGTTCCAGGGGTGCGATTCACATGGCAATCA | + |
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Preference number: 6 (lower is better) Translates to: LRVTACGHTGGP*TVPGVRFTWQS Trigger: TGATTGCCATGTGAATCGCACCCCTGGAACTGTGCAGGGCCCACCTGTGTGGCCACACGCAGTGACCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS GCA 72 bp | CCAGAAGCCTGCCTGGGGCTGATGGAGTCAGCCTGCTaGCTCCCGCTTAGGGGATTTCTGCGAAAGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PEACLGLMESAC*LPLRGFLRKAD Trigger: ATCAGCCTTTCGCAGAAATCCCCTAAGCGGGAGGCAGCAGGCTGACTCCATCAGCCCCAGGCAGGCTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CCA 72 bp | TTCTGTGGTCACTCCTTTGCTCAGGGTCACTGCGTGTaGCCACACAGGTGGGCCCTGCACAGTTCCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: FCGHSFAQGHCV*PHRWALHSSRG Trigger: ACCCCTGGAACTGTGCAGGGCCCACCTGTGTGGCCACACGCAGTGACCCTGAGCAAAGGAGTGACCACAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS CAA 90 bp | ACGTCACACCTTTCTGCTTTGCCATGCACTTCTGTGGTCACTCCTTaGCTCAGGGTCACTGCGTGTGGCCACACAGGTGGGCCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: TSHLSALPCTSVVTP*LRVTACGHTGGPCT Trigger: TGTGCAGGGCCCACCTGTGTGGCCACACGCAGTGACCCTGAGCAAAGGAGTGACCACAGAAGTGCATGGCAAAGCAGAAAGGTGTGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS TCA 72 bp | CCTCCGAGCCATCAAGCCCTGTGCTTGTCCTCATGCTaGTGTCCTCTGAGCTGTCAGAAGCATCCAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PPSHQALCLSSC*CPLSCQKHPGC Trigger: GCACCCTGGATGCTTCTGACAGCTCAGAGGACATCAGCATGAGGACAAGCACAGGGCTTGATGGCTCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CAA 72 bp | TCTCTGAGCATGACCTCCACGCTGCCACCCAACTTCTaGGCCAAGGTCGTCAGTTACCTCCACGCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLSMTSTLPPNF*AKVVSYLHAAD Trigger: GTCAGCAGCGTGGAGGTAACTGACGACCTTGGCCAAGAAGTTGGGTGGCAGCGTGGAGGTCATGCTCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641078.1 ENST00000641562.1 |
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| CDS CAA 90 bp | TTTGAGACTAAGGCTGTCTTGTTCAGGCAAAGGCAGGCCAGTGTGTaGTTCAGGCACAGACAGGCCCAGTGGTTGCACGGCTGGCCGCTA | + |
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Preference number: 6 (lower is better) Translates to: FETKAVLFRQRQASV*FRHRQAQWLHGWPL Trigger: TAGCGGCCAGCCGTGCAACCACTGGGCCTGTCTGTGCCTGAACAACACACTGGCCTGCCTTTGCCTGAACAAGACAGCCTTAGTCTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | TGGTCTCCTAGGGGCAAGCGTGCTCCGCCGTTGTCTTaGGAATTTTCTACCAGGCCACACCCATCTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: WSPRGKRAPPLS*EFSTRPHPSAS Trigger: GCTTGCAGATGGGTGTGGCCTGGTAGAAAATTCTCAAGACAACGGCGGAGCACGCTTGCCCCTAGGAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS GCA 72 bp | CCAGTGTGTTGTTCAGGCACAGACAGGCCCAGTGGTTaGACGGCTGGCCGCTATGGTGAGACGTCTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: PVCCSGTDRPSG*TAGRYGETSSI Trigger: AATTGAAGACGTCTCACCATAGCGGCCAGCCGTGCAACCACTGGGCCTGTCTGTGCCTGAACAACACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CCA 72 bp | TCCAGGATTATCCAGATGGACTCTGACTGTGCCTGCTaGAAGGAGAAGACGGTGTCCATGCTCCTCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRIIQMDSDCAC*KEKTVSMLLGS Trigger: GGAGCCGAGGAGCATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS GCA 72 bp | CTTTCCTCCCGCGTCCTCCAAGACGTCACACCTTTCTaGTTTGCCATGCACTTCTGTGGTCACTCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSSRVLQDVTPF*FAMHFCGHSFA Trigger: AGCAAAGGAGTGACCACAGAAGTGCATGGCAAAGCAGAAAGGTGTGACGTCTTGGAGGACGCGGGAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS GCA 72 bp | TTATCCAGGATTATCCAGATGGACTCTGACTGTGCCTaGTGGAAGGAGAAGACGGTGTCCATGCTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LSRIIQMDSDCA*WKEKTVSMLLG Trigger: GCCGAGGAGCATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGATAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS CCA 72 bp | GGTGGGCCCTGCACAGTTCCAGGGGTGCGATTCACATaGCAATCATGGCAGAAGGCAAAGAAGAAACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GGPCTVPGVRFT*QSWQKAKKKQA Trigger: TGCTTGTTTCTTCTTTGCCTTCTGCCATGATTGCCATGTGAATCGCACCCCTGGAACTGTGCAGGGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000641078.1 ENST00000641562.1 ENST00000642026.2 |
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| CDS TCA 72 bp | AGGGTGCAGCTGATTCTCGAAGAACATGTAAAAGGATaGAGAGCCATAGCTGCAGGGCCCAGAAGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RVQLILEEHVKG*RAIAAGPRSLP Trigger: AGGCAGGCTTCTGGGCCCTGCAGCTATGGCTCTTCATCCTTTTACATGTTCTTCGAGAATCAGCTGCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | ATCAAGCCCTGTGCTTGTCCTCATGCTGATGTCCTCTaGGCTGTCAGAAGCATCCAGGGTGCAGCTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: IKPCACPHADVL*AVRSIQGAADS Trigger: AGAATCAGCTGCACCCTGGATGCTTCTGACAGCTCAGAGGACATCAGCATGAGGACAAGCACAGGGCTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CAA 90 bp | CGTTGTCTTGAGAATTTTCTACCAGGCCACACCCATCTGCAAGCTTaGAGACTAAGGCTGTCTTGTTCAGGCAAAGGCAGGCCAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RCLENFLPGHTHLQA*RLRLSCSGKGRPVC Trigger: ACACACTGGCCTGCCTTTGCCTGAACAAGACAGCCTTAGTCTCAAAGCTTGCAGATGGGTGTGGCCTGGTAGAAAATTCTCAAGACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | AGACAGGCCCAGTGGTTGCACGGCTGGCCGCTATGGTaGGACGTCTTCAATTACAAGATATGTCCTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: RQAQWLHGWPLW*DVFNYKICPDF Trigger: AAAATCAGGACATATCTTGTAATTGAAGACGTCTCACCATAGCGGCCAGCCGTGCAACCACTGGGCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS CCA 72 bp | GGATCTCCAGATGAGATTTATCCAGGATTATCCAGATaGACTCTGACTGTGCCTGCTGGAAGGAGAAGACGG | + |
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Preference number: 6 (lower is better) Translates to: GSPDEIYPGLSR*TLTVPAGRRRR Trigger: CCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTGGAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS CAA 72 bp | GAGAATTTTCTACCAGGCCACACCCATCTGCAAGCTTaGAGACTAAGGCTGTCTTGTTCAGGCAAAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ENFLPGHTHLQA*RLRLSCSGKGR Trigger: CCTGCCTTTGCCTGAACAAGACAGCCTTAGTCTCAAAGCTTGCAGATGGGTGTGGCCTGGTAGAAAATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | CAGATGAGATTTATCCAGGATTATCCAGATGGACTCTaGCTGTGCCTGCTGGAAGGAGAAGACGGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QMRFIQDYPDGL*LCLLEGEDGVH Trigger: ATGGACACCGTCTTCTCCTTCCAGCAGGCACAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641562.1 |
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| CDS CCA 72 bp | GGATCTCCAGATGAGATTTATCCAGGATTATCCAGATaGACTCTGACTGCAATAACAAGTGTCTCTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GSPDEIYPGLSR*TLTAITSVSEH Trigger: ATGCTCAGAGACACTTGTTATTGCAGTCAGAGTCCATCTGGATAATCCTGGATAAATCTCATCTGGAGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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| CDS TCA 72 bp | GCTATGGTGAGACGTCTTCAATTACAAGATATGTCCTaGTTTTGGAGATGTCCAAGCATTAAAAACTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AMVRRLQLQDMS*FWRCPSIKNWA Trigger: GGCCCAGTTTTTAATGCTTGGACATCTCCAAAATCAGGACATATCTTGTAATTGAAGACGTCTCACCATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641078.1 |
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