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Pregenerated sensors for LINC02779 (Homo sapiens)

Ensembl gene IDs: ENSG00000231529

Ensembl transcript IDs: ENST00000446169.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGAGGGCAGGCGAGGCAGATTCTAGAAGTCCAGTCACTGAAGGGCTaGTCACTTTCTGGGGCTATCACAATACCCCAGAGTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GGQARQILEVQSLKG*SLSGAITIPQSPRT
Trigger: TGTCCTGGGACTCTGGGGTATTGTGATAGCCCCAGAAAGTGAGCAGCCCTTCAGTGACTGGACTTCTAGAATCTGCCTCGCCTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS GCA 90 bp CACCAGGTGAGTAATGTACAGGGTGGTGGCACCATTGTAAGCCTCTaGCACATCTCTGAGGGCCCAGCTTTAATTACACCAGGATCCAGT +
Preference number: 5 (lower is better)
Translates to: HQVSNVQGGGTIVSL*HISEGPALITPGSS
Trigger: ACTGGATCCTGGTGTAATTAAAGCTGGGCCCTCAGAGATGTGGCAGAGGCTTACAATGGTGCCACCACCCTGTACATTACTCACCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CCA 90 bp CTCATCCCAAAGGACTGGCAGAGGTTGACCTCTATAGGTGAGCTTTaGAGGTATCTCTCTGGAGGGTGTTTCGTTCCCTTATTTGACATC +
Preference number: 5 (lower is better)
Translates to: LIPKDWQRLTSIGEL*RYLSGGCFVPLFDI
Trigger: GATGTCAAATAAGGGAACGAAACACCCTCCAGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CCA 90 bp AGCTTTCCACTGCAGAAAGGCATTCATGACCTCATCCCAAAGGACTaGCAGAGGTTGACCTCTATAGGTGAGCTTTGGAGGTATCTCTCT +
Preference number: 5 (lower is better)
Translates to: SFPLQKGIHDLIPKD*QRLTSIGELWRYLS
Trigger: AGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATGAGGTCATGAATGCCTTTCTGCAGTGGAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS TCA 72 bp GGGTGGTGGCACCATTGTAAGCCTCTGCCACATCTCTaGGGGCCCAGCTTTAATTACACCAGGATCCAGTGT +
Preference number: 6 (lower is better)
Translates to: GWWHHCKPLPHL*GPSFNYTRIQC
Trigger: ACACTGGATCCTGGTGTAATTAAAGCTGGGCCCTCAGAGATGTGGCAGAGGCTTACAATGGTGCCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CAA 72 bp ACCCCAGAGTCCCAGGACACTGGGCAAAAGATAGCCTaGGCCCTACTACTCAGCCTTTCATCAGGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: TPESQDTGQKIA*ALLLSLSSGQR
Trigger: TCTTTGGCCTGATGAAAGGCTGAGTAGTAGGGCCAAGGCTATCTTTTGCCCAGTGTCCTGGGACTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CAA 90 bp TATCACAATACCCCAGAGTCCCAGGACACTGGGCAAAAGATAGCCTaGGCCCTACTACTCAGCCTTTCATCAGGCCAAAGAGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: YHNTPESQDTGQKIA*ALLLSLSSGQRGLC
Trigger: GCAGAGGCCTCTTTGGCCTGATGAAAGGCTGAGTAGTAGGGCCAAGGCTATCTTTTGCCCAGTGTCCTGGGACTCTGGGGTATTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CAA 90 bp CTGCAGAAAGGCATTCATGACCTCATCCCAAAGGACTGGCAGAGGTaGACCTCTATAGGTGAGCTTTGGAGGTATCTCTCTGGAGGGTGT +
Preference number: 6 (lower is better)
Translates to: LQKGIHDLIPKDWQR*TSIGELWRYLSGGC
Trigger: ACACCCTCCAGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATGAGGTCATGAATGCCTTTCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS TCA 72 bp CATCCCAAAGGACTGGCAGAGGTTGACCTCTATAGGTaGGCTTTGGAGGTATCTCTCTGGAGGGTGTTTCGT +
Preference number: 6 (lower is better)
Translates to: HPKGLAEVDLYR*ALEVSLWRVFR
Trigger: ACGAAACACCCTCCAGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS TCA 72 bp CAGAAGGCAAAGCTTTCCACTGCAGAAAGGCATTCATaGCCTCATCCCAAAGGACTGGCAGAGGTTGACCTC +
Preference number: 6 (lower is better)
Translates to: QKAKLSTAERHS*PHPKGLAEVDL
Trigger: GAGGTCAACCTCTGCCAGTCCTTTGGGATGAGGTCATGAATGCCTTTCTGCAGTGGAAAGCTTTGCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS GCA 72 bp CTACTACTCAGCCTTTCATCAGGCCAAAGAGGCCTCTaGCAGGAGACATTTCTGAAGTCTGAAGGTGTGCGT +
Preference number: 6 (lower is better)
Translates to: LLLSLSSGQRGL*QETFLKSEGVR
Trigger: ACGCACACCTTCAGACTTCAGAAATGTCTCCTGGCAGAGGCCTCTTTGGCCTGATGAAAGGCTGAGTAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CCA 72 bp CTGCAGAAAGGCATTCATGACCTCATCCCAAAGGACTaGCAGAGGTTGACCTCTATAGGTGAGCTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: LQKGIHDLIPKD*QRLTSIGELWR
Trigger: CCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATGAGGTCATGAATGCCTTTCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CCA 72 bp AAGGACTGGCAGAGGTTGACCTCTATAGGTGAGCTTTaGAGGTATCTCTCTGGAGGGTGTTTCGTTCCCTTA +
Preference number: 6 (lower is better)
Translates to: KDWQRLTSIGEL*RYLSGGCFVPL
Trigger: TAAGGGAACGAAACACCCTCCAGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS CAA 72 bp GGCATTCATGACCTCATCCCAAAGGACTGGCAGAGGTaGACCTCTATAGGTGAGCTTTGGAGGTATCTCTCT +
Preference number: 6 (lower is better)
Translates to: GIHDLIPKDWQR*TSIGELWRYLS
Trigger: AGAGAGATACCTCCAAAGCTCACCTATAGAGGTCAACCTCTGCCAGTCCTTTGGGATGAGGTCATGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS TCA 72 bp CCATGGTTAATTTTTAACTTCCCCATTGGTGAGTCCTaGATCAGAGGACAGTGTTTCTATGGTGTCAGGCGA +
Preference number: 6 (lower is better)
Translates to: PWLIFNFPIGES*IRGQCFYGVRR
Trigger: TCGCCTGACACCATAGAAACACTGTCCTCTGATTCAGGACTCACCAATGGGGAAGTTAAAAATTAACCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446169.2
CDS TCA 72 bp GAGGTATCTCTCTGGAGGGTGTTTCGTTCCCTTATTTaGCATCCTTCTTGGGGCTACAACTCTAGAAGTAAA +
Preference number: 6 (lower is better)
Translates to: EVSLWRVFRSLI*HPSWGYNSRSK
Trigger: TTTACTTCTAGAGTTGTAGCCCCAAGAAGGATGTCAAATAAGGGAACGAAACACCCTCCAGAGAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446169.2