Pregenerated sensors for LINC02777 (Homo sapiens)
Ensembl gene IDs: ENSG00000232453Ensembl transcript IDs: ENST00000423408.6, ENST00000427292.2, ENST00000634763.1, ENST00000634986.1, ENST00000635492.1, ENST00000653076.1, ENST00000660449.1, ENST00000662139.1, ENST00000665413.1, ENST00000669325.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGCTCCCTGGGCAGGGTGTTTTCCAGGGACTTATGGATCAGGTCTaGCTCTTTCCAAAAGGCCCTCTGACTGCCAGCCCTCCCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLPGQGVFQGLMDQV*LFPKGPLTASPPRG Trigger: CCCTCTGGGAGGGCTGGCAGTCAGAGGGCCTTTTGGAAAGAGTCAGACCTGATCCATAAGTCCCTGGAAAACACCCTGCCCAGGGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS GCA 90 bp | GGGACTTATGGATCAGGTCTGACTCTTTCCAAAAGGCCCTCTGACTaGCAGCCCTCCCAGAGGGGTCAGAGAGCATTTCCCAGCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GTYGSGLTLSKRPSD*QPSQRGQRAFPSFP Trigger: TGGGAAGCTGGGAAATGCTCTCTGACCCCTCTGGGAGGGCTGGCAGTCAGAGGGCCTTTTGGAAAGAGTCAGACCTGATCCATAAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS TCA 90 bp | CCTTTCTTCAGCCTTTTCCTTCTCCAGTGCTTCCCAGAAACCGCATaGTCTTCCTGGGCCAGGTCCAGCTGCACTGGGTCTGGATGTCGT | + |
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Preference number: 5 (lower is better) Translates to: PFFSLFLLQCFPETA*SSWARSSCTGSGCR Trigger: ACGACATCCAGACCCAGTGCAGCTGGACCTGGCCCAGGAAGATCATGCGGTTTCTGGGAAGCACTGGAGAAGGAAAAGGCTGAAGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423408.6 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000669325.1 |
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| CDS CCA 90 bp | CAGGTCCAGCTGCACTGGGTCTGGATGTCGTATCTCAGGAGCCAGTaGGCTTGGGGTGAAGATGGACAGCCTTTTCTAGAAGATACAGAC | + |
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Preference number: 5 (lower is better) Translates to: QVQLHWVWMSYLRSQ*AWGEDGQPFLEDTD Trigger: GTCTGTATCTTCTAGAAAAGGCTGTCCATCTTCACCCCAAGCCCACTGGCTCCTGAGATACGACATCCAGACCCAGTGCAGCTGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 90 bp | CAGCTGCACTGGGTCTGGATGTCGTATCTCAGGAGCCAGTGGGCTTaGGGTGAAGATGGACAGCCTTTTCTAGAAGATACAGACTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: QLHWVWMSYLRSQWA*GEDGQPFLEDTDCD Trigger: GTCACAGTCTGTATCTTCTAGAAAAGGCTGTCCATCTTCACCCCAAGCCCACTGGCTCCTGAGATACGACATCCAGACCCAGTGCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 90 bp | AGTACCTGGTCACACCTGGCCCTCTCCGAGAGGTTTTCAATGCCCTaGGCTACAGTTTTGTTCAGTTGTGCTCTCAGGGTGCTAATGACA | + |
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Preference number: 5 (lower is better) Translates to: STWSHLALSERFSMP*ATVLFSCALRVLMT Trigger: TGTCATTAGCACCCTGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAGGGCCAGGTGTGACCAGGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423408.6 ENST00000427292.2 |
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| CDS TCA 90 bp | AGCATTTCCCAGCTTCCCACTGGGCCTGCCTATCTTTGGGAGCTTTaGAGTCCTACATTTAGAGGACATGGATCAGCCCCAAACCTAAGA | + |
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Preference number: 5 (lower is better) Translates to: SISQLPTGPAYLWEL*SPTFRGHGSAPNLR Trigger: TCTTAGGTTTGGGGCTGATCCATGTCCTCTAAATGTAGGACTTCAAAGCTCCCAAAGATAGGCAGGCCCAGTGGGAAGCTGGGAAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS TCA 90 bp | AGTCCAGGAAGATTTCCATCTGTACCTTGTCTGCAAGCCAGACTCTaGACAATTTCCAGAAGGAGTCATGTCTTGTCATGCTCCCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: SPGRFPSVPCLQARL*TISRRSHVLSCSRD Trigger: GTCACGGGAGCATGACAAGACATGACTCCTTCTGGAAATTGTTCAGAGTCTGGCTTGCAGACAAGGTACAGATGGAAATCTTCCTGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665413.1 |
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| CDS CCA 90 bp | AGACTTCCTACAAAGCTGGAAAGTGGCTTTGAAGCCAGGCTTATGTaGCTCCAAAGCCTGAACTGCAAACCACTACTTGAAAATGAATGC | + |
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Preference number: 5 (lower is better) Translates to: RLPTKLESGFEARLM*LQSLNCKPLLENEC Trigger: GCATTCATTTTCAAGTAGTGGTTTGCAGTTCAGGCTTTGGAGCCACATAAGCCTGGCTTCAAAGCCACTTTCCAGCTTTGTAGGAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS TCA 90 bp | AGGTTTAAAAATGTAGAGACTTCCTACAAAGCTGGAAAGTGGCTTTaGAGCCAGGCTTATGTGGCTCCAAAGCCTGAACTGCAAACCACT | + |
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Preference number: 5 (lower is better) Translates to: RFKNVETSYKAGKWL*SQAYVAPKPELQTT Trigger: AGTGGTTTGCAGTTCAGGCTTTGGAGCCACATAAGCCTGGCTTCAAAGCCACTTTCCAGCTTTGTAGGAAGTCTCTACATTTTTAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 72 bp | CAGCTAAAGAAACTGCAACTCCGACGTTGGTGGCGCTaGGAGTCTCAGTGGCGGCGGGGCGGGGCAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QLKKLQLRRWWR*ESQWRRGGAGP Trigger: CGGCCCTGCCCCGCCCCGCCGCCACTGAGACTCCCAGCGCCACCAACGTCGGAGTTGCAGTTTCTTTAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000634763.1 ENST00000653076.1 ENST00000662139.1 |
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| CDS CAA 90 bp | AGTACTTGTCTGCATATGACAGCTAAAGAAACTGCAACTCCGACGTaGGTGGCGCTGGGAGTCTCAGTGGCGGCGGGGCGGGGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STCLHMTAKETATPT*VALGVSVAAGRGRA Trigger: GGCCCTGCCCCGCCCCGCCGCCACTGAGACTCCCAGCGCCACCAACGTCGGAGTTGCAGTTTCTTTAGCTGTCATATGCAGACAAGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000634763.1 ENST00000653076.1 ENST00000662139.1 |
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| CDS CAA 72 bp | CTGCATATGACAGCTAAAGAAACTGCAACTCCGACGTaGGTGGCGCTGGGAGTCTCAGTGGCGGCGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LHMTAKETATPT*VALGVSVAAGR Trigger: CCGCCCCGCCGCCACTGAGACTCCCAGCGCCACCAACGTCGGAGTTGCAGTTTCTTTAGCTGTCATATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000662139.1 |
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| CDS TCA 72 bp | CTAGAGAGAGGAGCCAGGAACCGTGGATCTCTGCCGTaGATCCGAGCCCTTAGAGCTGGAGACCTCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LERGARNRGSLP*IRALRAGDLTW Trigger: CCAAGTGAGGTCTCCAGCTCTAAGGGCTCGGATTCACGGCAGAGATCCACGGTTCCTGGCTCCTCTCTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634986.1 ENST00000653076.1 |
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| CDS CCA 72 bp | TTTCTTTTCCTGGGCCAGGTCCAGCTGCACTGGGTCTaGATGTCGTATCTCAGGAGCCAGTGGGCTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: FLFLGQVQLHWV*MSYLRSQWAWG Trigger: ACCCCAAGCCCACTGGCTCCTGAGATACGACATCCAGACCCAGTGCAGCTGGACCTGGCCCAGGAAAAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427292.2 ENST00000662139.1 ENST00000665413.1 |
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| CDS TCA 72 bp | AGCCTTTTCCTTCTCCAGTGCTTCCCAGAAACCGCATaGTCTTCCTGGGCCAGGTCCAGCTGCACTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLFLLQCFPETA*SSWARSSCTGS Trigger: AGACCCAGTGCAGCTGGACCTGGCCCAGGAAGATCATGCGGTTTCTGGGAAGCACTGGAGAAGGAAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423408.6 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000669325.1 |
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| CDS TCA 72 bp | GGGCAGGGTGTTTTCCAGGGACTTATGGATCAGGTCTaGCTCTTTCCAAAAGGCCCTCTGACTGCCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GQGVFQGLMDQV*LFPKGPLTASP Trigger: AGGGCTGGCAGTCAGAGGGCCTTTTGGAAAGAGTCAGACCTGATCCATAAGTCCCTGGAAAACACCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS GCA 72 bp | CCTGGTCACACCTGGCCCTCTCCGAGAGGTTTTCAATaGCCTGGGCTACAGTTTTGTTCAGTTGTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGHTWPSPRGFQ*PGLQFCSVVLS Trigger: TGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAGGGCCAGGTGTGACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423408.6 ENST00000427292.2 |
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| CDS GCA 72 bp | GCTGGTCACACCTGGCCCTCTCCGAGAGGTTTTCAATaGCCTGGGCTACAGTTTTGTTCAGTTGTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AGHTWPSPRGFQ*PGLQFCSVVLS Trigger: TGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAGGGCCAGGTGTGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660449.1 |
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| CDS CCA 72 bp | TCACACCTGGCCCTCTCCGAGAGGTTTTCAATGCCCTaGGCTACAGTTTTGTTCAGTTGTGCTCTCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SHLALSERFSMP*ATVLFSCALRV Trigger: CACCCTGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAGGGCCAGGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000660449.1 |
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| CDS CCA 72 bp | CTGCACTGGGTCTGGATGTCGTATCTCAGGAGCCAGTaGGCTTGGGGTGAAGATGGACAGCCTTTTCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LHWVWMSYLRSQ*AWGEDGQPFLE Trigger: TTCTAGAAAAGGCTGTCCATCTTCACCCCAAGCCCACTGGCTCCTGAGATACGACATCCAGACCCAGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CAA 90 bp | CACCTGGCCCTCTCCGAGAGGTTTTCAATGCCCTGGGCTACAGTTTaGTTCAGTTGTGCTCTCAGGGTGCTAATGACAGCACACCCACAT | + |
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Preference number: 6 (lower is better) Translates to: HLALSERFSMPWATV*FSCALRVLMTAHPH Trigger: ATGTGGGTGTGCTGTCATTAGCACCCTGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAGGGCCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423408.6 ENST00000427292.2 |
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| CDS CCA 72 bp | TGGGTCTGGATGTCGTATCTCAGGAGCCAGTGGGCTTaGGGTGAAGATGGACAGCCTTTTCTAGAAGATACA | + |
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Preference number: 6 (lower is better) Translates to: WVWMSYLRSQWA*GEDGQPFLEDT Trigger: TGTATCTTCTAGAAAAGGCTGTCCATCTTCACCCCAAGCCCACTGGCTCCTGAGATACGACATCCAGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 72 bp | TTGCACTTCCTCTGTGGTAGAGCTGGAGCTGGAATGTaGGGTGAAGGTCTGGTTCCACATTTTCACGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: LHFLCGRAGAGM*GEGLVPHFHVV Trigger: GACTACGTGAAAATGTGGAACCAGACCTTCACCCCACATTCCAGCTCCAGCTCTACCACAGAGGAAGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS TCA 72 bp | GTGAGTCAGCAGCGTGGTGAGAGCTGCCAAGATTGCTaGTGTGAACTCTGGTTGTATCACGAGGAGCATAAT | + |
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Preference number: 6 (lower is better) Translates to: VSQQRGESCQDC*CELWLYHEEHN Trigger: ATTATGCTCCTCGTGATACAACCAGAGTTCACATCAGCAATCTTGGCAGCTCTCACCACGCTGCTGACTCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 72 bp | CAAAGGCTGCTACAAAGACCTTCGGGTCCTGGAATCTaGACTTGCTTCTACCACAAACTTGCTGCGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QRLLQRPSGPGI*TCFYHKLAAFP Trigger: AGGAAACGCAGCAAGTTTGTGGTAGAAGCAAGTCCAGATTCCAGGACCCGAAGGTCTTTGTAGCAGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634986.1 |
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| CDS CAA 72 bp | CTCTCCGAGAGGTTTTCAATGCCCTGGGCTACAGTTTaGTTCAGTTGTGCTCTCAGGGTGCTAATGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSERFSMPWATV*FSCALRVLMTA Trigger: TGCTGTCATTAGCACCCTGAGAGCACAACTGAACAAAACTGTAGCCCAGGGCATTGAAAACCTCTCGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423408.6 ENST00000427292.2 |
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| CDS CAA 72 bp | GCTGCTACAAAGACCTTCGGGTCCTGGAATCTGGACTaGCTTCTACCACAAACTTGCTGCGTTTCCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: AATKTFGSWNLD*LLPQTCCVSLN Trigger: GTTCAAGGAAACGCAGCAAGTTTGTGGTAGAAGCAAGTCCAGATTCCAGGACCCGAAGGTCTTTGTAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634986.1 |
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| CDS TCA 72 bp | AACCGGAACTTATCCAATAGAGCAGAACCGGAACACTaGAGGGAACGGTACTATCATCTTTGCCAAGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: NRNLSNRAEPEH*RERYYHLCQGG Trigger: TCCGCCTTGGCAAAGATGATAGTACCGTTCCCTTCAGTGTTCCGGTTCTGCTCTATTGGATAAGTTCCGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CCA 72 bp | ACAAAGCTGGAAAGTGGCTTTGAAGCCAGGCTTATGTaGCTCCAAAGCCTGAACTGCAAACCACTACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: TKLESGFEARLM*LQSLNCKPLLE Trigger: TTCAAGTAGTGGTTTGCAGTTCAGGCTTTGGAGCCACATAAGCCTGGCTTCAAAGCCACTTTCCAGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CAA 72 bp | AGAACCGGAACACTGAAGGGAACGGTACTATCATCTTaGCCAAGGCGGAAGGACTTGTATTTCTTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTGTLKGTVLSS*PRRKDLYFFSW Trigger: CCAGGAAAAGAAATACAAGTCCTTCCGCCTTGGCAAAGATGATAGTACCGTTCCCTTCAGTGTTCCGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427292.2 ENST00000662139.1 ENST00000665413.1 |
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| CDS CAA 90 bp | ACACTGAAGGGAACGGTACTATCATCTTTGCCAAGGCGGAAGGACTaGTATTTCTTTTCCGGTCTTCCTTTCTTCAGCCTTTTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLKGTVLSSLPRRKD*YFFSGLPFFSLFLL Trigger: GAGAAGGAAAAGGCTGAAGAAAGGAAGACCGGAAAAGAAATACAAGTCCTTCCGCCTTGGCAAAGATGATAGTACCGTTCCCTTCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423408.6 ENST00000634763.1 ENST00000635492.1 ENST00000660449.1 ENST00000669325.1 |
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| CDS CAA 72 bp | GGAACGGTACTATCATCTTTGCCAAGGCGGAAGGACTaGTATTTCTTTTCCGGTCTTCCTTTCTTCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTVLSSLPRRKD*YFFSGLPFFSL Trigger: AAGGCTGAAGAAAGGAAGACCGGAAAAGAAATACAAGTCCTTCCGCCTTGGCAAAGATGATAGTACCGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423408.6 ENST00000634763.1 ENST00000635492.1 ENST00000660449.1 ENST00000669325.1 |
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| CDS TCA 72 bp | AGATTTCCATCTGTACCTTGTCTGCAAGCCAGACTCTaGACAATTTCCAGAAGGAGTCATGTCTTGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: RFPSVPCLQARL*TISRRSHVLSC Trigger: GCATGACAAGACATGACTCCTTCTGGAAATTGTTCAGAGTCTGGCTTGCAGACAAGGTACAGATGGAAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665413.1 |
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| CDS CAA 72 bp | AACCACTACTTGAAAATGAATGCGTGTGTGGATGAATaGCAGCTCCCAAACTCTTCTGAAGCCTCAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NHYLKMNACVDE*QLPNSSEASVK Trigger: CTTGACTGAGGCTTCAGAAGAGTTTGGGAGCTGCAATTCATCCACACACGCATTCATTTTCAAGTAGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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| CDS CAA 72 bp | GGAACGGTACTATCATCTTTGCCAAGGCGGAAGGACTaGTATTTCTTTTCCTTGAAGCCAAATCCTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GTVLSSLPRRKD*YFFSLKPNPCS Trigger: ACTGCAAGGATTTGGCTTCAAGGAAAAGAAATACAAGTCCTTCCGCCTTGGCAAAGATGATAGTACCGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634986.1 ENST00000653076.1 |
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| CDS TCA 72 bp | CTTTGCCAAGGCGGAAGGACTTGTATTTCTTTTCCTTaGAGCCAAATCCTTGCAGTAATAGAGAGGACTAAG | + |
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Preference number: 6 (lower is better) Translates to: LCQGGRTCISFP*SQILAVIERTK Trigger: CTTAGTCCTCTCTATTACTGCAAGGATTTGGCTTCAAGGAAAAGAAATACAAGTCCTTCCGCCTTGGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634986.1 ENST00000653076.1 |
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| CDS TCA 72 bp | GTGAACTCTGGTTGTATCACGAGGAGCATAATGTGTTaGATAACTAAGGTGATATTGCACTTCCTCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VNSGCITRSIMC*ITKVILHFLCG Trigger: ACCACAGAGGAAGTGCAATATCACCTTAGTTATTCAACACATTATGCTCCTCGTGATACAACCAGAGTTCAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000423408.6 ENST00000427292.2 ENST00000634763.1 ENST00000634986.1 ENST00000635492.1 ENST00000653076.1 ENST00000660449.1 ENST00000662139.1 ENST00000665413.1 ENST00000669325.1 |
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