Pregenerated sensors for LINC02775 (Homo sapiens)
Ensembl gene IDs: ENSG00000283518Ensembl transcript IDs: ENST00000637598.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGGCGGGCGGCGCTTGGCACATCCCGAAGAACGCTGCCTCGGTTaGCTGCGAACGCTCAGGGCAGGCGCCAAGGGGGCTTCAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: AGGRRLAHPEERCLG*LRTLRAGAKGASGG Trigger: TCCCCCTGAAGCCCCCTTGGCGCCTGCCCTGAGCGTTCGCAGGCAACCGAGGCAGCGTTCTTCGGGATGTGCCAAGCGCCGCCCGCCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | GCGGGCGGCGCTTGGCACATCCCGAAGAACGCTGCCTCGGTTGCCTaGGAACGCTCAGGGCAGGCGCCAAGGGGGCTTCAGGGGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: AGGAWHIPKNAASVA*ERSGQAPRGLQGDR Trigger: CCTGTCCCCCTGAAGCCCCCTTGGCGCCTGCCCTGAGCGTTCGCAGGCAACCGAGGCAGCGTTCTTCGGGATGTGCCAAGCGCCGCCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | CGCGCACCGCTCGCTCGGGCTGCGGGCAGGCAGCAATCAGCTAATTaGCTAATCGGAGTGGGGAGCTGGTGCCCGCTCGCCGCGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: RAPLARAAGRQQSAN*LIGVGSWCPLAAVA Trigger: GGCGACCGCGGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTGCTGCCTGCCCGCAGCCCGAGCGAGCGGTGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | GGGAGCTATCAAAGTCGGAGAACGTGCCTCTGTTTGCAGGAGAGGTaGGCAGGCAGCGAGATCCCCGCGCACCGCTCGCTCGGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GSYQSRRTCLCLQER*AGSEIPAHRSLGLR Trigger: CCGCAGCCCGAGCGAGCGGTGCGCGGGGATCTCGCTGCCTGCCCACCTCTCCTGCAAACAGAGGCACGTTCTCCGACTTTGATAGCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | GGCAGGCAGCAATCAGCTAATTGCCTAATCGGAGTGGGGAGCTGGTaGCCGCTCGCCGCGGTCGCCTCGCGGGTCACAGACAAGAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRQQSANCLIGVGSW*PLAAVASRVTDKRA Trigger: CGCTCTCTTGTCTGTGACCCGCGAGGCGACCGCGGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTGCTGCCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | GCGGGCAGGCAGCAATCAGCTAATTGCCTAATCGGAGTGGGGAGCTaGTGCCCGCTCGCCGCGGTCGCCTCGCGGGTCACAGACAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AGRQQSANCLIGVGS*CPLAAVASRVTDKR Trigger: TCTCTTGTCTGTGACCCGCGAGGCGACCGCGGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTGCTGCCTGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | GTTGTTTTTCACAGGAACCCAGGGAGCTATCAAAGTCGGAGAACGTaGCTCTGTTTGCAGGAGAGGTGGGCAGGCAGCGAGATCCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: VVFHRNPGSYQSRRT*LCLQERWAGSEIPA Trigger: CGCGGGGATCTCGCTGCCTGCCCACCTCTCCTGCAAACAGAGGCACGTTCTCCGACTTTGATAGCTCCCTGGGTTCCTGTGAAAAACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | GGAGCCAAGGTTCTTCCATTTTACGGAGTGGCAGGATCGGCTGCCTaGGAGTCATCCTTCCATTTTCCCAGAAGCACAAGCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GAKVLPFYGVAGSAA*ESSFHFPRSTSCCC Trigger: GCAGCAGCAGCTTGTGCTTCTGGGAAAATGGAAGGATGACTCCCAGGCAGCCGATCCTGCCACTCCGTAAAATGGAAGAACCTTGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 90 bp | GCCACTCCAGCTGCTGGTGTATCCCCTTTCTCTGCTGCATACATTTaGCATAGTGGAACAAGGCCAGTAATGCTTGAGGGGATACCATCC | + |
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Preference number: 5 (lower is better) Translates to: ATPAAGVSPFSAAYI*HSGTRPVMLEGIPS Trigger: GGATGGTATCCCCTCAAGCATTACTGGCCTTGTTCCACTATGTCAAATGTATGCAGCAGAGAAAGGGGATACACCAGCAGCTGGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | TCAAGGATTCCTGAGACCTGGCCTAAGATGTCTGGTAGTTCTAGCTaGAACCAGAATCAGCTGGCATTTCTGACCCATGGGCTTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SRIPETWPKMSGSSS*NQNQLAFLTHGLWK Trigger: CTTCCAAAGCCCATGGGTCAGAAATGCCAGCTGATTCTGGTTCCAGCTAGAACTACCAGACATCTTAGGCCAGGTCTCAGGAATCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | GATCCCCTGACGCTGGTATTTGAGAAACACACTCTGGAAACGCTGTaGTTGTTTTTCACAGGAACCCAGGGAGCTATCAAAGTCGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: DPLTLVFEKHTLETL*LFFTGTQGAIKVGE Trigger: TTCTCCGACTTTGATAGCTCCCTGGGTTCCTGTGAAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 90 bp | CAGTGTCAACCTCGTAACATTTGCTGCTGTAATTCTGCGATCCCCTaGCGCTGGTATTTGAGAAACACACTCTGGAAACGCTGTGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: QCQPRNICCCNSAIP*RWYLRNTLWKRCGC Trigger: ACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGGATCGCAGAATTACAGCAGCAAATGTTACGAGGTTGACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 90 bp | GGCCTCAATGTTATGCAGATTTTTGCCTCAAGGATTCCTGAGACCTaGCCTAAGATGTCTGGTAGTTCTAGCTGGAACCAGAATCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GLNVMQIFASRIPET*PKMSGSSSWNQNQL Trigger: CAGCTGATTCTGGTTCCAGCTAGAACTACCAGACATCTTAGGCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | TGGGTAGGTCCAACTCCATTAGGCTCATCTTTGGCCTCAATGTTATaGAGATTTTTGCCTCAAGGATTCCTGAGACCTGGCCTAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: WVGPTPLGSSLASML*RFLPQGFLRPGLRC Trigger: ACATCTTAGGCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAATGGAGTTGGACCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 90 bp | GTAACATTTGCTGCTGTAATTCTGCGATCCCCTGACGCTGGTATTTaGGAAACACACTCTGGAAACGCTGTGGTTGTTTTTCACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VTFAAVILRSPDAGI*ETHSGNAVVVFHRN Trigger: GTTCCTGTGAAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGGATCGCAGAATTACAGCAGCAAATGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 90 bp | GAATGGAGTGCAGTATTGTGGGAAAGAATTATCACTAATTCTGTCTaGCTACAGCTTCCTCGGCCCTGTTCATCTGATCTCAATTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: EWSAVLWERIITNSV*LQLPRPCSSDLNSL Trigger: TAGGGAATTGAGATCAGATGAACAGGGCCGAGGAAGCTGTAGGCAGACAGAATTAGTGATAATTCTTTCCCACAATACTGCACTCCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | GCGGCGCTTGGCACATCCCGAAGAACGCTGCCTCGGTaGCCTGCGAACGCTCAGGGCAGGCGCCAAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AALGTSRRTLPR*PANAQGRRQGG Trigger: GCCCCCTTGGCGCCTGCCCTGAGCGTTCGCAGGCAACCGAGGCAGCGTTCTTCGGGATGTGCCAAGCGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CGGCGCTTGGCACATCCCGAAGAACGCTGCCTCGGTTaGCTGCGAACGCTCAGGGCAGGCGCCAAGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRLAHPEERCLG*LRTLRAGAKGA Trigger: AGCCCCCTTGGCGCCTGCCCTGAGCGTTCGCAGGCAACCGAGGCAGCGTTCTTCGGGATGTGCCAAGCGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | GCTTGGCACATCCCGAAGAACGCTGCCTCGGTTGCCTaGGAACGCTCAGGGCAGGCGCCAAGGGGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AWHIPKNAASVA*ERSGQAPRGLQ Trigger: CTGAAGCCCCCTTGGCGCCTGCCCTGAGCGTTCGCAGGCAACCGAGGCAGCGTTCTTCGGGATGTGCCAAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CTCGCTCGGGCTGCGGGCAGGCAGCAATCAGCTAATTaGCTAATCGGAGTGGGGAGCTGGTGCCCGCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LARAAGRQQSAN*LIGVGSWCPLA Trigger: GGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTGCTGCCTGCCCGCAGCCCGAGCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CAATCAGCTAATTGCCTAATCGGAGTGGGGAGCTGGTaGCCGCTCGCCGCGGTCGCCTCGCGGGTCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: QSANCLIGVGSW*PLAAVASRVTD Trigger: GTCTGTGACCCGCGAGGCGACCGCGGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | CAGCAATCAGCTAATTGCCTAATCGGAGTGGGGAGCTaGTGCCCGCTCGCCGCGGTCGCCTCGCGGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: QQSANCLIGVGS*CPLAAVASRVT Trigger: TGTGACCCGCGAGGCGACCGCGGCGAGCGGGCACCAGCTCCCCACTCCGATTAGGCAATTAGCTGATTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CTCTGTCACATCGTCGTCTTGAACCGTGTGGTCTGTTaGAGGGGAAGGGGCCGAGCTGGAGGAGCGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LCHIVVLNRVVC*RGRGRAGGASG Trigger: CCCGCTCGCTCCTCCAGCTCGGCCCCTTCCCCTGCAACAGACCACACGGTTCAAGACGACGATGTGACAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 90 bp | CCCGCTCGCCGCGGTCGCCTCGCGGGTCACAGACAAGAGAGCGGCTaGTTTTCTCTCTGTCACATCGTCGTCTTGAACCGTGTGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PARRGRLAGHRQESG*FSLCHIVVLNRVVC Trigger: ACAGACCACACGGTTCAAGACGACGATGTGACAGAGAGAAAACAAGCCGCTCTCTTGTCTGTGACCCGCGAGGCGACCGCGGCGAGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | CGCGGTCGCCTCGCGGGTCACAGACAAGAGAGCGGCTaGTTTTCTCTCTGTCACATCGTCGTCTTGAACCGT | + |
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Preference number: 6 (lower is better) Translates to: RGRLAGHRQESG*FSLCHIVVLNR Trigger: ACGGTTCAAGACGACGATGTGACAGAGAGAAAACAAGCCGCTCTCTTGTCTGTGACCCGCGAGGCGACCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | TCACACGGGGAGCCAAGGTTCTTCCATTTTACGGAGTaGCAGGATCGGCTGCCTGGGAGTCATCCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SHGEPRFFHFTE*QDRLPGSHPSI Trigger: AATGGAAGGATGACTCCCAGGCAGCCGATCCTGCCACTCCGTAAAATGGAAGAACCTTGGCTCCCCGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CAAGGTTCTTCCATTTTACGGAGTGGCAGGATCGGCTaGCTGGGAGTCATCCTTCCATTTTCCCAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QGSSILRSGRIG*LGVILPFSQKH Trigger: GTGCTTCTGGGAAAATGGAAGGATGACTCCCAGGCAGCCGATCCTGCCACTCCGTAAAATGGAAGAACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | GTTCTAGTGTCCTTCCTTCCGCTCAGCCACTCCAGCTaGTGGTGTATCCCCTTTCTCTGCTGCATACATTTG | + |
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Preference number: 6 (lower is better) Translates to: VLVSFLPLSHSS*WCIPFLCCIHL Trigger: CAAATGTATGCAGCAGAGAAAGGGGATACACCAGCAGCTGGAGTGGCTGAGCGGAAGGAAGGACACTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | GTTCTTCCATTTTACGGAGTGGCAGGATCGGCTGCCTaGGAGTCATCCTTCCATTTTCCCAGAAGCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: VLPFYGVAGSAA*ESSFHFPRSTS Trigger: GCTTGTGCTTCTGGGAAAATGGAAGGATGACTCCCAGGCAGCCGATCCTGCCACTCCGTAAAATGGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | CTAGTGTCCTTCCTTCCGCTCAGCCACTCCAGCTGCTaGTGTATCCCCTTTCTCTGCTGCATACATTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LVSFLPLSHSSC*CIPFLCCIHLT Trigger: TGTCAAATGTATGCAGCAGAGAAAGGGGATACACCAGCAGCTGGAGTGGCTGAGCGGAAGGAAGGACACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | CCTGAGACCTGGCCTAAGATGTCTGGTAGTTCTAGCTaGAACCAGAATCAGCTGGCATTTCTGACCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: PETWPKMSGSSS*NQNQLAFLTHG Trigger: CCCATGGGTCAGAAATGCCAGCTGATTCTGGTTCCAGCTAGAACTACCAGACATCTTAGGCCAGGTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 90 bp | CCCCTGACGCTGGTATTTGAGAAACACACTCTGGAAACGCTGTGGTaGTTTTTCACAGGAACCCAGGGAGCTATCAAAGTCGGAGAACGT | + |
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Preference number: 6 (lower is better) Translates to: PLTLVFEKHTLETLW*FFTGTQGAIKVGER Trigger: ACGTTCTCCGACTTTGATAGCTCCCTGGGTTCCTGTGAAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | GCTGCTGGTGTATCCCCTTTCTCTGCTGCATACATTTaGCATAGTGGAACAAGGCCAGTAATGCTTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: AAGVSPFSAAYI*HSGTRPVMLEG Trigger: CCCCTCAAGCATTACTGGCCTTGTTCCACTATGTCAAATGTATGCAGCAGAGAAAGGGGATACACCAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | CCTCGTAACATTTGCTGCTGTAATTCTGCGATCCCCTaGCGCTGGTATTTGAGAAACACACTCTGGAAACGC | + |
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Preference number: 6 (lower is better) Translates to: PRNICCCNSAIP*RWYLRNTLWKR Trigger: GCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGGATCGCAGAATTACAGCAGCAAATGTTACGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | CTCTTGCCAGATCTGTTTTGGCCGAGGGCATGCACTTaGGGTATGTTAGAAGAATGGAGTGCAGTATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LLPDLFWPRACT*GMLEEWSAVLW Trigger: CCACAATACTGCACTCCATTCTTCTAACATACCTCAAGTGCATGCCCTCGGCCAAAACAGATCTGGCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | CCTCTTGCCAGATCTGTTTTGGCCGAGGGCATGCACTaGAGGTATGTTAGAAGAATGGAGTGCAGTATTGTG | + |
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Preference number: 6 (lower is better) Translates to: PLARSVLAEGMH*RYVRRMECSIV Trigger: CACAATACTGCACTCCATTCTTCTAACATACCTCAAGTGCATGCCCTCGGCCAAAACAGATCTGGCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | GCTGCTGTAATTCTGCGATCCCCTGACGCTGGTATTTaGGAAACACACTCTGGAAACGCTGTGGTTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: AAVILRSPDAGI*ETHSGNAVVVF Trigger: AAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGTCAGGGGATCGCAGAATTACAGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CCTTACATCATTGAAATCCATTCACTTCTCTCCAGCTaGTATGTCAGTACCTTGGTTCACGGCACCATCGAC | + |
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Preference number: 6 (lower is better) Translates to: PYIIEIHSLLSS*YVSTLVHGTID Trigger: GTCGATGGTGCCGTGAACCAAGGTACTGACATAGCAGCTGGAGAGAAGTGAATGGATTTCAATGATGTAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CCAACTCCATTAGGCTCATCTTTGGCCTCAATGTTATaGAGATTTTTGCCTCAAGGATTCCTGAGACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PTPLGSSLASML*RFLPQGFLRPG Trigger: GCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAATGGAGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | TCCATTCACTTCTCTCCAGCTGCTATGTCAGTACCTTaGTTCACGGCACCATCGACTCTTATCTTAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SIHFSPAAMSVP*FTAPSTLILAS Trigger: AGATGCTAAGATAAGAGTCGATGGTGCCGTGAACCAAGGTACTGACATAGCAGCTGGAGAGAAGTGAATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | GTTATGCAGATTTTTGCCTCAAGGATTCCTGAGACCTaGCCTAAGATGTCTGGTAGTTCTAGCTGGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: VMQIFASRIPET*PKMSGSSSWNQ Trigger: CTGGTTCCAGCTAGAACTACCAGACATCTTAGGCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 90 bp | CCAACTCCATTAGGCTCATCTTTGGCCTCAATGTTATGCAGATTTTaGCCTCAAGGATTCCTGAGACCTGGCCTAAGATGTCTGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: PTPLGSSLASMLCRF*PQGFLRPGLRCLVV Trigger: AACTACCAGACATCTTAGGCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAATGGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | GCAGTATTGTGGGAAAGAATTATCACTAATTCTGTCTaGCTACAGCTTCCTCGGCCCTGTTCATCTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: AVLWERIITNSV*LQLPRPCSSDL Trigger: GAGATCAGATGAACAGGGCCGAGGAAGCTGTAGGCAGACAGAATTAGTGATAATTCTTTCCCACAATACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | ACGCTGGTATTTGAGAAACACACTCTGGAAACGCTGTaGTTGTTTTTCACAGGAACCCAGGGAGCTATCAAA | + |
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Preference number: 6 (lower is better) Translates to: TLVFEKHTLETL*LFFTGTQGAIK Trigger: TTTGATAGCTCCCTGGGTTCCTGTGAAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | CTGGTATTTGAGAAACACACTCTGGAAACGCTGTGGTaGTTTTTCACAGGAACCCAGGGAGCTATCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LVFEKHTLETLW*FFTGTQGAIKV Trigger: GACTTTGATAGCTCCCTGGGTTCCTGTGAAAAACAACCACAGCGTTTCCAGAGTGTGTTTCTCAAATACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | TGCAAGTCCATGACCTGGTTCCAGAAAGTAGATTTTTaGGCTGAAAGAGCAAGATCGCAGCATTCCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: CKSMTWFQKVDF*AERARSQHSHD Trigger: ATCATGGGAATGCTGCGATCTTGCTCTTTCAGCTCAAAAATCTACTTTCTGGAACCAGGTCATGGACTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | TTAGGCTCATCTTTGGCCTCAATGTTATGCAGATTTTaGCCTCAAGGATTCCTGAGACCTGGCCTAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LGSSLASMLCRF*PQGFLRPGLRC Trigger: ACATCTTAGGCCAGGTCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | GTCATCATTGTTAATCTTCCTCTTGCCAGATCTGTTTaGGCCGAGGGCATGCACTTGAGGTATGTTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VIIVNLPLARSV*AEGMHLRYVRR Trigger: TCTTCTAACATACCTCAAGTGCATGCCCTCGGCCAAAACAGATCTGGCAAGAGGAAGATTAACAATGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 90 bp | AAGTCTACCACTAAATGGGTAGGTCCAACTCCATTAGGCTCATCTTaGGCCTCAATGTTATGCAGATTTTTGCCTCAAGGATTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KSTTKWVGPTPLGSS*ASMLCRFLPQGFLR Trigger: TCTCAGGAATCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAATGGAGTTGGACCTACCCATTTAGTGGTAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | ACTAAATGGGTAGGTCCAACTCCATTAGGCTCATCTTaGGCCTCAATGTTATGCAGATTTTTGCCTCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: TKWVGPTPLGSS*ASMLCRFLPQG Trigger: TCCTTGAGGCAAAAATCTGCATAACATTGAGGCCAAAGATGAGCCTAATGGAGTTGGACCTACCCATTTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 90 bp | ACTATTTTTGTCATCATTGTTAATCTTCCTCTTGCCAGATCTGTTTaGGCCGAGGGCATGCACTTGAGGTATGTTAGAAGAATGGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TIFVIIVNLPLARSV*AEGMHLRYVRRMEC Trigger: GCACTCCATTCTTCTAACATACCTCAAGTGCATGCCCTCGGCCAAAACAGATCTGGCAAGAGGAAGATTAACAATGATGACAAAAATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | CAGAATATTTTGCCAATAAAGAAGTCTACCACTAAATaGGTAGGTCCAACTCCATTAGGCTCATCTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QNILPIKKSTTK*VGPTPLGSSLA Trigger: GGCCAAAGATGAGCCTAATGGAGTTGGACCTACCCATTTAGTGGTAGACTTCTTTATTGGCAAAATATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS GCA 72 bp | CTCAATTCCCTAAACAAAATTGTAGATGGAAAGTCCTaGAAGTCCATGACCTGGTTCCAGAAAGTAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LNSLNKIVDGKS*KSMTWFQKVDF Trigger: AAAATCTACTTTCTGGAACCAGGTCATGGACTTGCAGGACTTTCCATCTACAATTTTGTTTAGGGAATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CCA 72 bp | AAAAATCTTCTTCTAAGTGAGCAGCATCCATTCACTTaGCGCAAATCAAGATCCTACAGTCATTCTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: KNLLLSEQHPFT*RKSRSYSHSVI Trigger: AATGACAGAATGACTGTAGGATCTTGATTTGCGCCAAGTGAATGGATGCTGCTCACTTAGAAGAAGATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | AATTATTTTGTTGTCAGTTCATCTCCCTTACATCATTaGAATCCATTCACTTCTCTCCAGCTGCTATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: NYFVVSSSPLHH*NPFTSLQLLCQ Trigger: CTGACATAGCAGCTGGAGAGAAGTGAATGGATTTCAATGATGTAAGGGAGATGAACTGACAACAAAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS CAA 72 bp | CAATTATTTTGTTGTCAGTTCATCTCCCTTACATCATaGAAATCCATTCACTTCTCTCCAGCTGCTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: QLFCCQFISLTS*KSIHFSPAAMS Trigger: TGACATAGCAGCTGGAGAGAAGTGAATGGATTTCAATGATGTAAGGGAGATGAACTGACAACAAAATAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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| CDS TCA 72 bp | TACAGTCGTGACAATGTTCTCCTTGCAAGCTTGTTATaGGGATTAAATGTGGTATTGTATCTGAAATCACTT | + |
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Preference number: 6 (lower is better) Translates to: YSRDNVLLASLL*GLNVVLYLKSL Trigger: AAGTGATTTCAGATACAATACCACATTTAATCCTCATAACAAGCTTGCAAGGAGAACATTGTCACGACTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637598.1 |
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