Pregenerated sensors for LINC02774 (Homo sapiens)
Ensembl gene IDs: ENSG00000226828Ensembl transcript IDs: ENST00000440494.1, ENST00000652928.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AACAACATCTCCCACCATCAGTCCCTGCCTTGGCAATCAGGCACCTaGCGATTCCTAGCACCTCCCGTCTCTTTAAGTTGTCCTAACACC | + |
|
Preference number: 5 (lower is better) Translates to: NNISHHQSLPWQSGT*RFLAPPVSLSCPNT Trigger: GGTGTTAGGACAACTTAAAGAGACGGGAGGTGCTAGGAATCGGCAGGTGCCTGATTGCCAAGGCAGGGACTGATGGTGGGAGATGTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 90 bp | GTGCAGATCAATCTCCCAGTGGAAAGAGATCAACTTCTCCCGCTGTaGTTTTTCCTCTCAATCAGTGTGGCTGTCACAGGGACTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQINLPVERDQLLPL*FFLSISVAVTGTVP Trigger: GGGAACAGTCCCTGTGACAGCCACACTGATTGAGAGGAAAAAGCACAGCGGGAGAAGTTGATCTCTTTCCACTGGGAGATTGATCTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 90 bp | TGTGACGATTTCTGCTTGGAAGTGGGGAGGTCACTGACAGCTCCATaGTGTCTCCAATGTTGGAATGTGAGCTTCATGGAATCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CDDFCLEVGRSLTAP*CLQCWNVSFMESSS Trigger: AGAAGAAGATTCCATGAAGCTCACATTCCAACATTGGAGACAGCATGGAGCTGTCAGTGACCTCCCCACTTCCAAGCAGAAATCGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440494.1 ENST00000652928.1 |
||
| CDS CCA 90 bp | ACTGGCAAGCCTGTTGCTAACCAACCTGCCAGGAGACCTTTCAACTaGGCAAAATGTGCTTTCACTTTGTTCCAGGTCAAATGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGKPVANQPARRPFN*AKCAFTLFQVKWVK Trigger: CTTTACCCATTTGACCTGGAACAAAGTGAAAGCACATTTTGCCCAGTTGAAAGGTCTCCTGGCAGGTTGGTTAGCAACAGGCTTGCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS TCA 90 bp | TCCTTTTCCATAACATTGGGAAGATATGTTTTGATCGTTGCATCCTaGACGCGTTCAGTTCAAACATACCTTCTTACATGTGACGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSITLGRYVLIVAS*TRSVQTYLLTCDDF Trigger: GAAATCGTCACATGTAAGAAGGTATGTTTGAACTGAACGCGTTCAGGATGCAACGATCAAAACATATCTTCCCAATGTTATGGAAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652928.1 |
||
| CDS GCA 72 bp | TTCTTTTGTGGCTCATGGGAAAGCACGGCTAATCCGTaGGAGCCCGCGCGCTCGCCCCTCGGCTGCATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FFCGSWESTANP*EPARSPLGCIQ Trigger: CTGAATGCAGCCGAGGGGCGAGCGCGCGGGCTCGCACGGATTAGCCGTGCTTTCCCATGAGCCACAAAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS CCA 72 bp | CAGATGTCCCAGATTCGGGCATTCTTTTGTGGCTCATaGGAAAGCACGGCTAATCCGTGCGAGCCCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QMSQIRAFFCGS*ESTANPCEPAR Trigger: GCGCGCGGGCTCGCACGGATTAGCCGTGCTTTCCCATGAGCCACAAAAGAATGCCCGAATCTGGGACATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 72 bp | TCCCACCATCAGTCCCTGCCTTGGCAATCAGGCACCTaGCGATTCCTAGCACCTCCCGTCTCTTTAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SHHQSLPWQSGT*RFLAPPVSLSC Trigger: ACAACTTAAAGAGACGGGAGGTGCTAGGAATCGGCAGGTGCCTGATTGCCAAGGCAGGGACTGATGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS CCA 72 bp | TTCTGTAACAACATCTCCCACCATCAGTCCCTGCCTTaGCAATCAGGCACCTGCCGATTCCTAGCACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FCNNISHHQSLP*QSGTCRFLAPP Trigger: GGGAGGTGCTAGGAATCGGCAGGTGCCTGATTGCCAAGGCAGGGACTGATGGTGGGAGATGTTGTTACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS CAA 72 bp | TATTCTTTGCTAACAGAACCCAGACTGGCAAGCCTGTaGCTAACCAACCTGCCAGGAGACCTTTCAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YSLLTEPRLASL*LTNLPGDLSTG Trigger: CCCAGTTGAAAGGTCTCCTGGCAGGTTGGTTAGCAACAGGCTTGCCAGTCTGGGTTCTGTTAGCAAAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS CAA 90 bp | GCATCCCTATCTCTTTTCTTCCTTCTTACATGTGACGATTTCTGCTaGGAAGTGGGGAGGTCACTGACAGCTCCATGCTGTCTCCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: ASLSLFFLLTCDDFC*EVGRSLTAPCCLQC Trigger: ACATTGGAGACAGCATGGAGCTGTCAGTGACCTCCCCACTTCCAAGCAGAAATCGTCACATGTAAGAAGGAAGAAAAGAGATAGGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 72 bp | CTATCTCTTTTCTTCCTTCTTACATGTGACGATTTCTaGTTGGAAGTGGGGAGGTCACTGACAGCTCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLFFLLTCDDF*LEVGRSLTAPC Trigger: GCATGGAGCTGTCAGTGACCTCCCCACTTCCAAGCAGAAATCGTCACATGTAAGAAGGAAGAAAAGAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 72 bp | TCAGTTCAAACATACCTTCTTACATGTGACGATTTCTaGTTGGAAGTGGGGAGGTCACTGACAGCTCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SVQTYLLTCDDF*LEVGRSLTAPC Trigger: GCATGGAGCTGTCAGTGACCTCCCCACTTCCAAGCAGAAATCGTCACATGTAAGAAGGTATGTTTGAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652928.1 |
||
| CDS CAA 90 bp | AAATGTGTTTATTCTTTGCTAACAGAACCCAGACTGGCAAGCCTGTaGCTAACCAACCTGCCAGGAGACCTTTCAACTGGGCAAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: KCVYSLLTEPRLASL*LTNLPGDLSTGQNV Trigger: CACATTTTGCCCAGTTGAAAGGTCTCCTGGCAGGTTGGTTAGCAACAGGCTTGCCAGTCTGGGTTCTGTTAGCAAAGAATAAACACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS GCA 72 bp | CCAACCTGCCAGGAGACCTTTCAACTGGGCAAAATGTaGTTTCACTTTGTTCCAGGTCAAATGGGTAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTCQETFQLGKM*FHFVPGQMGKV Trigger: TACTTTACCCATTTGACCTGGAACAAAGTGAAAGCACATTTTGCCCAGTTGAAAGGTCTCCTGGCAGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS TCA 72 bp | TTTTTCTCAACCCTCTACGCCCTCATGATTCATCACTaGGGTCAAGGATATCCTATGAAAATTGGAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FFSTLYALMIHH*GQGYPMKIGVF Trigger: AAAAACTCCAATTTTCATAGGATATCCTTGACCTCAGTGATGAATCATGAGGGCGTAGAGGGTTGAGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||
| CDS TCA 72 bp | ATAACATTGGGAAGATATGTTTTGATCGTTGCATCCTaGACGCGTTCAGTTCAAACATACCTTCTTACATGT | + |
|
Preference number: 6 (lower is better) Translates to: ITLGRYVLIVAS*TRSVQTYLLTC Trigger: ACATGTAAGAAGGTATGTTTGAACTGAACGCGTTCAGGATGCAACGATCAAAACATATCTTCCCAATGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652928.1 |
||
| CDS CAA 72 bp | CTTCAGGATTCTCTTTTTCTCTTGTCCTGGAGAAACTaGATTCTGCTGGTTAAATCTATTGTTTTGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LQDSLFLLSWRN*ILLVKSIVLES Trigger: AGATTCCAAAACAATAGATTTAACCAGCAGAATCAAGTTTCTCCAGGACAAGAGAAAAAGAGAATCCTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440494.1 |
||