Pregenerated sensors for LINC02772 (Homo sapiens)
Ensembl gene IDs: ENSG00000271736Ensembl transcript IDs: ENST00000607010.1, ENST00000662441.1, ENST00000662968.1, ENST00000670336.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTTTCCACCTTCACCTTCACCATTTTTACATTCCACCAGCAATGTaGGAGAATATCTCCATATCCTTCCCAACCCTTGCTATTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: FFHLHLHHFYIPPAM*ENISISFPTLAIVH Trigger: ATGGACAATAGCAAGGGTTGGGAAGGATATGGAGATATTCTCCCACATTGCTGGTGGAATGTAAAAATGGTGAAGGTGAAGGTGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS TCA 90 bp | TACACCCAGATGATCTGTCTTCATTATCCACTCTCATTTTCTTTCTaGGATTGTGGCTCTGCACTAATTCCTGGACCATATGCCAATATA | + |
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Preference number: 5 (lower is better) Translates to: YTQMICLHYPLSFSF*DCGSALIPGPYANI Trigger: TATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAGATCATCTGGGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS GCA 90 bp | CTGTCTTCATTATCCACTCTCATTTTCTTTCTGAGATTGTGGCTCTaGACTAATTCCTGGACCATATGCCAATATAACCTTATGGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LSSLSTLIFFLRLWL*TNSWTICQYNLMAK Trigger: TTTTGCCATAAGGTTATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CCA 90 bp | GATGATCTGTCTTCATTATCCACTCTCATTTTCTTTCTGAGATTGTaGCTCTGCACTAATTCCTGGACCATATGCCAATATAACCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: DDLSSLSTLIFFLRL*LCTNSWTICQYNLM Trigger: CATAAGGTTATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAGATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS TCA 90 bp | TCTCTAACCTCTATATTCTGGAATATCCTCAGGTTTACACCCAGATaGTCTGTCTTCATTATCCACTCTCATTTTCTTTCTGAGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTSIFWNILRFTPR*SVFIIHSHFLSEIV Trigger: CACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAGATCATCTGGGTGTAAACCTGAGGATATTCCAGAATATAGAGGTTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS TCA 72 bp | ATCCTGGGTTATCTGGGTCAGTTCAGTATAATCACATaGGTCCTGGGCATGGTAGTAGGTGCCTGTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ILGYLGQFSIIT*VLGMVVGACGP Trigger: GGGACCACAGGCACCTACTACCATGCCCAGGACTCATGTGATTATACTGAACTGACCCAGATAACCCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607010.1 ENST00000662968.1 |
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| CDS TCA 72 bp | ATCCTGGGTTATCTGGGTCAGTTCAGTATAATCACATaGGTCCAACTCCTTCAGGCCACACACCTCTCGACT | + |
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Preference number: 6 (lower is better) Translates to: ILGYLGQFSIIT*VQLLQATHLST Trigger: AGTCGAGAGGTGTGTGGCCTGAAGGAGTTGGACTCATGTGATTATACTGAACTGACCCAGATAACCCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670336.1 |
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| CDS GCA 72 bp | AGTCCCTTCTGTCTTGAATTCTCTTCTGTCATGCATTaGCCCCACCACTCCATTAAAACTGCTCAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPFCLEFSSVMH*PHHSIKTAQVQ Trigger: CTGGACCTGAGCAGTTTTAATGGAGTGGTGGGGGCAATGCATGACAGAAGAGAATTCAAGACAGAAGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CAA 90 bp | ACTCCATTAAAACTGCTCAGGTCCAGGTCAGCAGAAAACTCCATGTaGCTAAATCCAATGGTCAATGCTCAGTCCTCATCTTCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: TPLKLLRSRSAENSM*LNPMVNAQSSSSLM Trigger: CATCAAGGAAGATGAGGACTGAGCATTGACCATTGGATTTAGCAACATGGAGTTTTCTGCTGACCTGGACCTGAGCAGTTTTAATGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CCA 72 bp | CTTCACCTTCACCATTTTTACATTCCACCAGCAATGTaGGAGAATATCTCCATATCCTTCCCAACCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LHLHHFYIPPAM*ENISISFPTLA Trigger: AGCAAGGGTTGGGAAGGATATGGAGATATTCTCCCACATTGCTGGTGGAATGTAAAAATGGTGAAGGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CAA 72 bp | CTAAATCCAATGGTCAATGCTCAGTCCTCATCTTCCTaGATGTGTCAGCAGCAATTAACATACCCTCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LNPMVNAQSSSS*MCQQQLTYPPL Trigger: CAAGGGAGGGTATGTTAATTGCTGCTGACACATCAAGGAAGATGAGGACTGAGCATTGACCATTGGATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CAA 90 bp | CCAGATGATCTGTCTTCATTATCCACTCTCATTTTCTTTCTGAGATaGTGGCTCTGCACTAATTCCTGGACCATATGCCAATATAACCTT | + |
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Preference number: 6 (lower is better) Translates to: PDDLSSLSTLIFFLR*WLCTNSWTICQYNL Trigger: AAGGTTATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAGATCATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS TCA 72 bp | ATCCTGGGTTATCTGGGTCAGTTCAGTATAATCACATaGGTCCTATTAAAAGGCTGGAATGTTAGGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: ILGYLGQFSIIT*VLLKGWNVRDK Trigger: TTTGTCCCTAACATTCCAGCCTTTTAATAGGACTCATGTGATTATACTGAACTGACCCAGATAACCCAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662441.1 |
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| CDS TCA 72 bp | ATGATCTGTCTTCATTATCCACTCTCATTTTCTTTCTaGGATTGTGGCTCTGCACTAATTCCTGGACCATAT | + |
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Preference number: 6 (lower is better) Translates to: MICLHYPLSFSF*DCGSALIPGPY Trigger: ATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGACAGATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS GCA 72 bp | TTATCCACTCTCATTTTCTTTCTGAGATTGTGGCTCTaGACTAATTCCTGGACCATATGCCAATATAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSTLIFFLRLWL*TNSWTICQYNL Trigger: AAGGTTATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS CCA 72 bp | TCTTCATTATCCACTCTCATTTTCTTTCTGAGATTGTaGCTCTGCACTAATTCCTGGACCATATGCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: SSLSTLIFFLRL*LCTNSWTICQY Trigger: ATATTGGCATATGGTCCAGGAATTAGTGCAGAGCCACAATCTCAGAAAGAAAATGAGAGTGGATAATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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| CDS TCA 72 bp | TCTATATTCTGGAATATCCTCAGGTTTACACCCAGATaGTCTGTCTTCATTATCCACTCTCATTTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SIFWNILRFTPR*SVFIIHSHFLS Trigger: AGAAAGAAAATGAGAGTGGATAATGAAGACAGATCATCTGGGTGTAAACCTGAGGATATTCCAGAATATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000607010.1 ENST00000662441.1 ENST00000662968.1 ENST00000670336.1 |
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