Pregenerated sensors for LINC02769 (Homo sapiens)
Ensembl gene IDs: ENSG00000259815Ensembl transcript IDs: ENST00000567538.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | CTTGGTACCTTGATCCAGTTTCCTCCAGCACAGTCCTGTGGTCAATaGTCGGGTCATGGAAATACTTCACATAGATGCGACAGCACACAC | + |
Preference number: 5 (lower is better) Translates to: LGTLIQFPPAQSCGQ*SGHGNTSHRCDSTH Trigger: GTGTGTGCTGTCGCATCTATGTGAAGTATTTCCATGACCCGAGCATTGACCACAGGACTGTGCTGGAGGAAACTGGATCAAGGTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567538.1 |
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CDS GCA 72 bp | TTGATCCAGTTTCCTCCAGCACAGTCCTGTGGTCAATaGTCGGGTCATGGAAATACTTCACATAGATGCGAC | + |
Preference number: 6 (lower is better) Translates to: LIQFPPAQSCGQ*SGHGNTSHRCD Trigger: GTCGCATCTATGTGAAGTATTTCCATGACCCGAGCATTGACCACAGGACTGTGCTGGAGGAAACTGGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567538.1 |
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CDS CAA 72 bp | TGGTCAGTTTTAATTATTAGAAGATTCTTCCTTATCTaGAGCCAAACTTTAACCCTTGATTTCAACCACCCT | + |
Preference number: 6 (lower is better) Translates to: WSVLIIRRFFLI*SQTLTLDFNHP Trigger: AGGGTGGTTGAAATCAAGGGTTAAAGTTTGGCTCAAGATAAGGAAGAATCTTCTAATAATTAAAACTGACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567538.1 |