RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02764 (Homo sapiens)

Ensembl gene IDs: ENSG00000255484

Ensembl transcript IDs: ENST00000525984.2

Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTGCACCGTCTGTCTCTGTGGGTGTCCTCAAAGCTCCCAGGACCGTaGCATGCTAGTAGCAGCTTCAGTCCCTCTGGGCCCAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: VHRLSLWVSSKLPGP*HASSSFSPSGPSCR
Trigger: TCTACAGCTGGGCCCAGAGGGACTGAAGCTGCTACTAGCATGGCACGGTCCTGGGAGCTTTGAGGACACCCACAGAGACAGACGGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp TCAGAATTGGTCTTCACTGCCCCCTCACATGTGGCAGAGAACCCATaGTCCTCCCAGTCTTTGTCCTGGGTGGCCTGCACCCTAAGACCT +
Preference number: 5 (lower is better)
Translates to: SELVFTAPSHVAENP*SSQSLSWVACTLRP
Trigger: AGGTCTTAGGGTGCAGGCCACCCAGGACAAAGACTGGGAGGAGCATGGGTTCTCTGCCACATGTGAGGGGGCAGTGAAGACCAATTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 90 bp TCCTGTTGGGCTTCTAAGTGCAACTTTCTTCTCCATGCCTGTTCCTaGGCAGCGGAACCCTCGGTGTGCACCGTCTGTCTCTGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SCWASKCNFLLHACS*AAEPSVCTVCLCGC
Trigger: ACACCCACAGAGACAGACGGTGCACACCGAGGGTTCCGCTGCTCAGGAACAGGCATGGAGAAGAAAGTTGCACTTAGAAGCCCAACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 90 bp ACTGGCAGGGCTGGAGCCCCAGAGCCCCTAGCCTGCACTCTGCAATaGTTACGAAATGCTGAGAGCTGGTCAGCTTCTATGTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: TGRAGAPEPLACTLQ*LRNAESWSASMSRN
Trigger: ATTTCTTGACATAGAAGCTGACCAGCTCTCAGCATTTCGTAATCATTGCAGAGTGCAGGCTAGGGGCTCTGGGGCTCCAGCCCTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp GGGATCCTCTCCTGGATGTTGGTACCCAGTCAGGTATTTTCCGTTTaGTCCTCCAGATTCTCTCTCCAGCCCTCTCAGCTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GILSWMLVPSQVFSV*SSRFSLQPSQLCSL
Trigger: AAGAGAGCAGAGCTGAGAGGGCTGGAGAGAGAATCTGGAGGAGCAAACGGAAAATACCTGACTGGGTACCAACATCCAGGAGAGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp AGAGGACAAGCAGGGGTCTACAGATGTGAAGTGACACCTGCTTGCTaGATGTGGTTGGGTAGCTGGGATGCTGCACAAATGTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: RGQAGVYRCEVTPAC*MWLGSWDAAQMYCW
Trigger: CCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTAGACCCCTGCTTGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp TGGAGAGGACAAGCAGGGGTCTACAGATGTGAAGTGACACCTGCTTaGTGCATGTGGTTGGGTAGCTGGGATGCTGCACAAATGTACTGT +
Preference number: 5 (lower is better)
Translates to: WRGQAGVYRCEVTPA*CMWLGSWDAAQMYC
Trigger: ACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTAGACCCCTGCTTGTCCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 90 bp GTCCCTCTGAGGATCCTTGACACACAGGGATCCTCTCCTGGATGTTaGTACCCAGTCAGGTATTTTCCGTTTGCTCCTCCAGATTCTCTC +
Preference number: 5 (lower is better)
Translates to: VPLRILDTQGSSPGC*YPVRYFPFAPPDSL
Trigger: GAGAGAATCTGGAGGAGCAAACGGAAAATACCTGACTGGGTACCAACATCCAGGAGAGGATCCCTGTGTGTCAAGGATCCTCAGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 90 bp TGCTGCATGTGGTTGGGTAGCTGGGATGCTGCACAAATGTACTGTTaGGAGGGTGGAAATTCAGCCATGCACTGTTTGCCAGATCAGGAA +
Preference number: 5 (lower is better)
Translates to: CCMWLGSWDAAQMYC*EGGNSAMHCLPDQE
Trigger: TTCCTGATCTGGCAAACAGTGCATGGCTGAATTTCCACCCTCCCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 90 bp TACAGATGTGAAGTGACACCTGCTTGCTGCATGTGGTTGGGTAGCTaGGATGCTGCACAAATGTACTGTTGGGAGGGTGGAAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: YRCEVTPACCMWLGS*DAAQMYCWEGGNSA
Trigger: GGCTGAATTTCCACCCTCCCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp GGGATGCTGCACAAATGTACTGTTGGGAGGGTGGAAATTCAGCCATaGACTGTTTGCCAGATCAGGAACTATGAGATGCTGCATCCAACC +
Preference number: 5 (lower is better)
Translates to: GMLHKCTVGRVEIQP*TVCQIRNYEMLHPT
Trigger: GGTTGGATGCAGCATCTCATAGTTCCTGATCTGGCAAACAGTGCATGGCTGAATTTCCACCCTCCCAACAGTACATTTGTGCAGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 90 bp ACCCATTATCTGTTGTTATGCATTAGTTGTCCCTCTGAGGATCCTTaGCACACAGGGATCCTCTCCTGGATGTTGGTACCCAGTCAGGTA +
Preference number: 5 (lower is better)
Translates to: THYLLLCISCPSEDP*HTGILSWMLVPSQV
Trigger: TACCTGACTGGGTACCAACATCCAGGAGAGGATCCCTGTGTGTCAAGGATCCTCAGAGGGACAACTAATGCATAACAACAGATAATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 90 bp AGCCCCAGAGCCCCTAGCCTGCACTCTGCAATGATTACGAAATGCTaGGAGCTGGTCAGCTTCTATGTCAAGAAATTAATGATAGCGATG +
Preference number: 5 (lower is better)
Translates to: SPRAPSLHSAMITKC*ELVSFYVKKLMIAM
Trigger: CATCGCTATCATTAATTTCTTGACATAGAAGCTGACCAGCTCTCAGCATTTCGTAATCATTGCAGAGTGCAGGCTAGGGGCTCTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp CGAGGTTGGCCAAGGAGGAGTGCAGGTGGTCAACTTCAGTTTCTGTaGTCTTCTCTCCTTTCATTAAACTTTTGTCTTGCAAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: RGWPRRSAGGQLQFL*SSLLSLNFCLAKLL
Trigger: CAGGAGTTTTGCAAGACAAAAGTTTAATGAAAGGAGAGAAGAGCACAGAAACTGAAGTTGACCACCTGCACTCCTCCTTGGCCAACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 90 bp ATGTGTGTAGTGGGTTTTGCGATCAGGAGGAGGCAGAAAGGAGTGTaGACCCATTATCTGTTGTTATGCATTAGTTGTCCCTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: MCVVGFAIRRRQKGV*THYLLLCISCPSED
Trigger: ATCCTCAGAGGGACAACTAATGCATAACAACAGATAATGGGTCCACACTCCTTTCTGCCTCCTCCTGATCGCAAAACCCACTACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp CACAAATGTACTGTTGGGAGGGTGGAAATTCAGCCATGCACTGTTTaGCAGATCAGGAACTATGAGATGCTGCATCCAACCAGAATATTC +
Preference number: 5 (lower is better)
Translates to: HKCTVGRVEIQPCTV*QIRNYEMLHPTRIF
Trigger: GAATATTCTGGTTGGATGCAGCATCTCATAGTTCCTGATCTGGCAAACAGTGCATGGCTGAATTTCCACCCTCCCAACAGTACATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp ATCTATATATATATATCTGTGTGTAGTGGGCATGTGTGTGTGTGGTaGATTTACATGTGTGTAGTGGGTTTTGCGATCAGGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: IYIYISVCSGHVCVW*IYMCVVGFAIRRRQ
Trigger: CTGCCTCCTCCTGATCGCAAAACCCACTACACACATGTAAATGCACCACACACACACATGCCCACTACACACAGATATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 90 bp TTGAATTCTAGATTTCTGTCGAGGTTGGCCAAGGAGGAGTGCAGGTaGTCAACTTCAGTTTCTGTGCTCTTCTCTCCTTTCATTAAACTT +
Preference number: 5 (lower is better)
Translates to: LNSRFLSRLAKEECR*STSVSVLFSPFIKL
Trigger: AAGTTTAATGAAAGGAGAGAAGAGCACAGAAACTGAAGTTGACCACCTGCACTCCTCCTTGGCCAACCTCGACAGAAATCTAGAATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 90 bp CCAGAATATTCTCTTATTTACTTGTGCAAAGGGGTGTCTTCTATTTaGACAAAGACACCTTATAGGCTAGAGGTGGCCCTCAGGAACATA +
Preference number: 5 (lower is better)
Translates to: PEYSLIYLCKGVSSI*TKTPYRLEVALRNI
Trigger: TATGTTCCTGAGGGCCACCTCTAGCCTATAAGGTGTCTTTGTGCAAATAGAAGACACCCCTTTGCACAAGTAAATAAGAGAATATTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp CTGTCTCTGTGGGTGTCCTCAAAGCTCCCAGGACCGTaGCATGCTAGTAGCAGCTTCAGTCCCTCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: LSLWVSSKLPGP*HASSSFSPSGP
Trigger: GGGCCCAGAGGGACTGAAGCTGCTACTAGCATGGCACGGTCCTGGGAGCTTTGAGGACACCCACAGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 72 bp GCTTCTAAGTGCAACTTTCTTCTCCATGCCTGTTCCTaGGCAGCGGAACCCTCGGTGTGCACCGTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: ASKCNFLLHACS*AAEPSVCTVCL
Trigger: GAGACAGACGGTGCACACCGAGGGTTCCGCTGCTCAGGAACAGGCATGGAGAAGAAAGTTGCACTTAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 72 bp GCTGGAGCCCCAGAGCCCCTAGCCTGCACTCTGCAATaGTTACGAAATGCTGAGAGCTGGTCAGCTTCTATG +
Preference number: 6 (lower is better)
Translates to: AGAPEPLACTLQ*LRNAESWSASM
Trigger: CATAGAAGCTGACCAGCTCTCAGCATTTCGTAATCATTGCAGAGTGCAGGCTAGGGGCTCTGGGGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 90 bp GCAGGGGTCTACAGATGTGAAGTGACACCTGCTTGCTGCATGTGGTaGGGTAGCTGGGATGCTGCACAAATGTACTGTTGGGAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: AGVYRCEVTPACCMW*GSWDAAQMYCWEGG
Trigger: TCCACCCTCCCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTAGACCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp GGGCCCAGCTGTAGAGGTGCCCTCAGGTCAGAGTACTaGAGATGGAACTCAGAAAACTTTGCAAAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: GPSCRGALRSEY*RWNSENFAKAG
Trigger: CCCTGCTTTTGCAAAGTTTTCTGAGTTCCATCTGCAGTACTCTGACCTGAGGGCACCTCTACAGCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp GCAGGGGTCTACAGATGTGAAGTGACACCTGCTTGCTaGATGTGGTTGGGTAGCTGGGATGCTGCACAAATG +
Preference number: 6 (lower is better)
Translates to: AGVYRCEVTPAC*MWLGSWDAAQM
Trigger: CATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTAGACCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp CAAGCAGGGGTCTACAGATGTGAAGTGACACCTGCTTaGTGCATGTGGTTGGGTAGCTGGGATGCTGCACAA +
Preference number: 6 (lower is better)
Translates to: QAGVYRCEVTPA*CMWLGSWDAAQ
Trigger: TTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTAGACCCCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 72 bp GAAGTGACACCTGCTTGCTGCATGTGGTTGGGTAGCTaGGATGCTGCACAAATGTACTGTTGGGAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: EVTPACCMWLGS*DAAQMYCWEGG
Trigger: TCCACCCTCCCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp TCCTGGATGTTGGTACCCAGTCAGGTATTTTCCGTTTaGTCCTCCAGATTCTCTCTCCAGCCCTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: SWMLVPSQVFSV*SSRFSLQPSQL
Trigger: GAGCTGAGAGGGCTGGAGAGAGAATCTGGAGGAGCAAACGGAAAATACCTGACTGGGTACCAACATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 72 bp CTCCTGGATGTTGGTACCCAGTCAGGTATTTTCCGTTaGCTCCTCCAGATTCTCTCTCCAGCCCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: LLDVGTQSGIFR*LLQILSPALSA
Trigger: AGCTGAGAGGGCTGGAGAGAGAATCTGGAGGAGCAAACGGAAAATACCTGACTGGGTACCAACATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 72 bp AGGATCCTTGACACACAGGGATCCTCTCCTGGATGTTaGTACCCAGTCAGGTATTTTCCGTTTGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RILDTQGSSPGC*YPVRYFPFAPP
Trigger: TGGAGGAGCAAACGGAAAATACCTGACTGGGTACCAACATCCAGGAGAGGATCCCTGTGTGTCAAGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 72 bp TGGTTGGGTAGCTGGGATGCTGCACAAATGTACTGTTaGGAGGGTGGAAATTCAGCCATGCACTGTTTGCCA +
Preference number: 6 (lower is better)
Translates to: WLGSWDAAQMYC*EGGNSAMHCLP
Trigger: TGGCAAACAGTGCATGGCTGAATTTCCACCCTCCCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 72 bp CTGTTGTTATGCATTAGTTGTCCCTCTGAGGATCCTTaGCACACAGGGATCCTCTCCTGGATGTTGGTACCC +
Preference number: 6 (lower is better)
Translates to: LLLCISCPSEDP*HTGILSWMLVP
Trigger: GGGTACCAACATCCAGGAGAGGATCCCTGTGTGTCAAGGATCCTCAGAGGGACAACTAATGCATAACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 72 bp TACAGATGTGAAGTGACACCTGCTTGCTGCATGTGGTaGGGTAGCTGGGATGCTGCACAAATGTACTGTTGG +
Preference number: 6 (lower is better)
Translates to: YRCEVTPACCMW*GSWDAAQMYCW
Trigger: CCAACAGTACATTTGTGCAGCATCCCAGCTACCCAACCACATGCAGCAAGCAGGTGTCACTTCACATCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 72 bp GTGGGTTTTGCGATCAGGAGGAGGCAGAAAGGAGTGTaGACCCATTATCTGTTGTTATGCATTAGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: VGFAIRRRQKGV*THYLLLCISCP
Trigger: GGGACAACTAATGCATAACAACAGATAATGGGTCCACACTCCTTTCTGCCTCCTCCTGATCGCAAAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp AATTCTAGATTTCTGTCGAGGTTGGCCAAGGAGGAGTaGAGGTGGTCAACTTCAGTTTCTGTGCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: NSRFLSRLAKEE*RWSTSVSVLFS
Trigger: AGAGAAGAGCACAGAAACTGAAGTTGACCACCTGCACTCCTCCTTGGCCAACCTCGACAGAAATCTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp CACAAATGTACTGTTGGGAGGGTGGAAATTCAGCCATaGACTGTTTGCCAGATCAGGAACTATGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: HKCTVGRVEIQP*TVCQIRNYEML
Trigger: CAGCATCTCATAGTTCCTGATCTGGCAAACAGTGCATGGCTGAATTTCCACCCTCCCAACAGTACATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 72 bp AGCAATGGTTCCTTGAATTCTAGATTTCTGTCGAGGTaGGCCAAGGAGGAGTGCAGGTGGTCAACTTCAGTT +
Preference number: 6 (lower is better)
Translates to: SNGSLNSRFLSR*AKEECRWSTSV
Trigger: AACTGAAGTTGACCACCTGCACTCCTCCTTGGCCAACCTCGACAGAAATCTAGAATTCAAGGAACCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 90 bp TGGTTCTCGCCTTGCATTTTGTCTCCTGTGTTGGATCTCCCTGTTTaGCAGATATTATCTTCACTTATGGAGAGGACAAGCAGGGGTCTA +
Preference number: 6 (lower is better)
Translates to: WFSPCILSPVLDLPV*QILSSLMERTSRGL
Trigger: TAGACCCCTGCTTGTCCTCTCCATAAGTGAAGATAATATCTGCAAAACAGGGAGATCCAACACAGGAGACAAAATGCAAGGCGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 72 bp GCCCCTAGCCTGCACTCTGCAATGATTACGAAATGCTaGGAGCTGGTCAGCTTCTATGTCAAGAAATTAATG +
Preference number: 6 (lower is better)
Translates to: APSLHSAMITKC*ELVSFYVKKLM
Trigger: CATTAATTTCTTGACATAGAAGCTGACCAGCTCTCAGCATTTCGTAATCATTGCAGAGTGCAGGCTAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 72 bp ATCCTCCAACTTCCTACTCTAAGATATCAATCAGAATaGGTCTTCACTGCCCCCTCACATGTGGCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: ILQLPTLRYQSE*VFTAPSHVAEN
Trigger: GTTCTCTGCCACATGTGAGGGGGCAGTGAAGACCAATTCTGATTGATATCTTAGAGTAGGAAGTTGGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS GCA 72 bp TCTCTTATTTACTTGTGCAAAGGGGTGTCTTCTATTTaGACAAAGACACCTTATAGGCTAGAGGTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: SLIYLCKGVSSI*TKTPYRLEVAL
Trigger: GAGGGCCACCTCTAGCCTATAAGGTGTCTTTGTGCAAATAGAAGACACCCCTTTGCACAAGTAAATAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 72 bp CCTTGCATTTTGTCTCCTGTGTTGGATCTCCCTGTTTaGCAGATATTATCTTCACTTATGGAGAGGACAAGC +
Preference number: 6 (lower is better)
Translates to: PCILSPVLDLPV*QILSSLMERTS
Trigger: GCTTGTCCTCTCCATAAGTGAAGATAATATCTGCAAAACAGGGAGATCCAACACAGGAGACAAAATGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CAA 90 bp TGGTCAACTTCAGTTTCTGTGCTCTTCTCTCCTTTCATTAAACTTTaGTCTTGCAAAACTCCTGTTGGGCTTCTAAGTGCAACTTTCTTC +
Preference number: 6 (lower is better)
Translates to: WSTSVSVLFSPFIKL*SCKTPVGLLSATFF
Trigger: GAAGAAAGTTGCACTTAGAAGCCCAACAGGAGTTTTGCAAGACAAAAGTTTAATGAAAGGAGAGAAGAGCACAGAAACTGAAGTTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS TCA 72 bp AATTCAGCCATGCACTGTTTGCCAGATCAGGAACTATaGGATGCTGCATCCAACCAGAATATTCTCTTATTT +
Preference number: 6 (lower is better)
Translates to: NSAMHCLPDQEL*DAASNQNILLF
Trigger: AAATAAGAGAATATTCTGGTTGGATGCAGCATCTCATAGTTCCTGATCTGGCAAACAGTGCATGGCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525984.2
CDS CCA 72 bp ATTATTGGTTCTCGCCTTGCATTTTGTCTCCTGTGTTaGATCTCCCTGTTTTGCAGATATTATCTTCACTTA +
Preference number: 6 (lower is better)
Translates to: IIGSRLAFCLLC*ISLFCRYYLHL
Trigger: TAAGTGAAGATAATATCTGCAAAACAGGGAGATCCAACACAGGAGACAAAATGCAAGGCGAGAACCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525984.2