Pregenerated sensors for LINC02763 (Homo sapiens)
Ensembl gene IDs: ENSG00000254968Ensembl transcript IDs: ENST00000528496.1, ENST00000529238.5, ENST00000529827.1, ENST00000665326.1, ENST00000671165.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGCTCCCTGGAAGCCCCAGCCAGCCTGACAGAGAGGAAGAGTTGTaGGTCCATTTTAGGAGAGGAGCATGCTCCCAGCGGGCCCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGSPSQPDREEEL*VHFRRGACSQRALP Trigger: TGGTAGGGCCCGCTGGGAGCATGCTCCTCTCCTAAAATGGACTCACAACTCTTCCTCTCTGTCAGGCTGGCTGGGGCTTCCAGGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS CCA 90 bp | GGTGAAGCCACATCAGACATGACTGAGGTCTTGTCAGCCAAGCATTaGTGGGCTCCTCTCCCCAGAGAGCTTCCCTCAGTGCCAACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEATSDMTEVLSAKH*WAPLPRELPSVPTS Trigger: GCTCGTTGGCACTGAGGGAAGCTCTCTGGGGAGAGGAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS CCA 90 bp | GGTCCGATTCCTGCTGTCTGGGATGCTGCTCCACAGGGCCCAGTTTaGGGACTGAATCAGAGGATCCTTCTGATGGTTCCATCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPIPAVWDAAPQGPV*GLNQRILLMVPSAQ Trigger: CTGGGCTGATGGAACCATCAGAAGGATCCTCTGATTCAGTCCCCAAACTGGGCCCTGTGGAGCAGCATCCCAGACAGCAGGAATCGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS GCA 90 bp | GTCCCAAGGAGTAATTGCAGGTCCGATTCCTGCTGTCTGGGATGCTaGTCCACAGGGCCCAGTTTGGGGACTGAATCAGAGGATCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPRSNCRSDSCCLGC*STGPSLGTESEDPS Trigger: AGAAGGATCCTCTGATTCAGTCCCCAAACTGGGCCCTGTGGAGCAGCATCCCAGACAGCAGGAATCGGACCTGCAATTACTCCTTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS GCA 90 bp | GAGGCAGGGCAGGGCTTGCAGATCAAGGGGATCCACTGTCCATGCTaGGAAGAGGAAGATCAAAAACGCAACAGTTCTAGGATCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGQGLQIKGIHCPC*EEEDQKRNSSRIPG Trigger: GCCTGGGATCCTAGAACTGTTGCGTTTTTGATCTTCCTCTTCGCAGCATGGACAGTGGATCCCCTTGATCTGCAAGCCCTGCCCTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS CCA 90 bp | GAAGCCACATCAGACATGACTGAGGTCTTGTCAGCCAAGCATTGGTaGGCTCCTCTCCCCAGAGAGCTTCCCTCAGTGCCAACGAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EATSDMTEVLSAKHW*APLPRELPSVPTSN Trigger: ATTGCTCGTTGGCACTGAGGGAAGCTCTCTGGGGAGAGGAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS TCA 90 bp | CCTAGTGATACGAAGACGGCAGCAAAGGTGAAGCCACATCAGACATaGCTGAGGTCTTGTCAGCCAAGCATTGGTGGGCTCCTCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSDTKTAAKVKPHQT*LRSCQPSIGGLLSP Trigger: TGGGGAGAGGAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTCACCTTTGCTGCCGTCTTCGTATCACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS GCA 90 bp | AGAGAGGCAGGGCAGGGCTTGCAGATCAAGGGGATCCACTGTCCATaGTGCGAAGAGGAAGATCAAAAACGCAACAGTTCTAGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: REAGQGLQIKGIHCP*CEEEDQKRNSSRIP Trigger: TGGGATCCTAGAACTGTTGCGTTTTTGATCTTCCTCTTCGCAGCATGGACAGTGGATCCCCTTGATCTGCAAGCCCTGCCCTGCCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS GCA 90 bp | CTAACCCTGACCCAGGTTAGCTTTGCTGCTCTCGGTCATATTTGCTaGTTGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLTQVSFAALGHIC*LSIPFFLEAQAYFV Trigger: CACAAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTGGGTCAGGGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS GCA 90 bp | GCACTAACCCTGACCCAGGTTAGCTTTGCTGCTCTCGGTCATATTTaGTGCTTGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALTLTQVSFAALGHI*CLSIPFFLEAQAYF Trigger: AAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTGGGTCAGGGTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS TCA 90 bp | CCACCTGCTCTGAAGATGTGCAGTTTTCTTGTTAAAACTCCTCCCTaGGTCCCAAGGAGTAATTGCAGGTCCGATTCCTGCTGTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPALKMCSFLVKTPP*VPRSNCRSDSCCLG Trigger: TCCCAGACAGCAGGAATCGGACCTGCAATTACTCCTTGGGACTCAGGGAGGAGTTTTAACAAGAAAACTGCACATCTTCAGAGCAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS TCA 90 bp | TCTTGTCCAAATGGTGACTCAGAGATCTGCAATTCTTCCACTGTGTaGCGACTCCATCTTCTAGGTCCCCATAGCCCTTCACTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCPNGDSEICNSSTV*RLHLLGPHSPSLGF Trigger: GAAGCCAAGTGAAGGGCTATGGGGACCTAGAAGATGGAGTCGTCACACAGTGGAAGAATTGCAGATCTCTGAGTCACCATTTGGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000528496.1 ENST00000529238.5 ENST00000665326.1 |
||
| CDS GCA 90 bp | GCTGCTTGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTTGTaGCTCTCAAGAACTGTGAAGAGCCTGATATTTTATAATACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: AACPSPSFLRLRPTL*LSRTVKSLIFYNTY Trigger: GTAAGTATTATAAAATATCAGGCTCTTCACAGTTCTTGAGAGGCACAAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS CCA 90 bp | CTTGGACTTCTTTACAGCCTCCTAACTGATTTCCCAACTTCTACCTaGCTTCATTCTTTTCCCACCCATTCAGATCCATTTCCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLLYSLLTDFPTST*LHSFPTHSDPFPTK Trigger: CTTTGTGGGAAATGGATCTGAATGGGTGGGAAAAGAATGAAGCCAGGTAGAAGTTGGGAAATCAGTTAGGAGGCTGTAAAGAAGTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671165.1 |
||
| CDS TCA 72 bp | GGAAGCCCCAGCCAGCCTGACAGAGAGGAAGAGTTGTaGGTCCATTTTAGGAGAGGAGCATGCTCCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPSQPDREEEL*VHFRRGACSQR Trigger: CCGCTGGGAGCATGCTCCTCTCCTAAAATGGACTCACAACTCTTCCTCTCTGTCAGGCTGGCTGGGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS GCA 72 bp | AGCTTCCCTCAGTGCCAACGAGCAATAGAGCAAGGCTaGCCCCCAAGAGCAAAAGTGCTCCTAAGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFPQCQRAIEQG*PPRAKVLLRPC Trigger: GCAGGGCCTTAGGAGCACTTTTGCTCTTGGGGGGCAGCCTTGCTCTATTGCTCGTTGGCACTGAGGGAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671165.1 |
||
| CDS CAA 90 bp | GAAGACGGCAGCAAAGGTGAAGCCACATCAGACATGACTGAGGTCTaGTCAGCCAAGCATTGGTGGGCTCCTCTCCCCAGAGAGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EDGSKGEATSDMTEV*SAKHWWAPLPRELP Trigger: GGGAAGCTCTCTGGGGAGAGGAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTCACCTTTGCTGCCGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS CAA 90 bp | AGGTCCGATTCCTGCTGTCTGGGATGCTGCTCCACAGGGCCCAGTTaGGGGACTGAATCAGAGGATCCTTCTGATGGTTCCATCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSDSCCLGCCSTGPS*GTESEDPSDGSISP Trigger: TGGGCTGATGGAACCATCAGAAGGATCCTCTGATTCAGTCCCCAAACTGGGCCCTGTGGAGCAGCATCCCAGACAGCAGGAATCGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS CCA 72 bp | CCTGCTGTCTGGGATGCTGCTCCACAGGGCCCAGTTTaGGGACTGAATCAGAGGATCCTTCTGATGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAVWDAAPQGPV*GLNQRILLMVP Trigger: TGGAACCATCAGAAGGATCCTCTGATTCAGTCCCCAAACTGGGCCCTGTGGAGCAGCATCCCAGACAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS GCA 72 bp | AGTAATTGCAGGTCCGATTCCTGCTGTCTGGGATGCTaGTCCACAGGGCCCAGTTTGGGGACTGAATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNCRSDSCCLGC*STGPSLGTESE Trigger: CTCTGATTCAGTCCCCAAACTGGGCCCTGTGGAGCAGCATCCCAGACAGCAGGAATCGGACCTGCAATTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS TCA 72 bp | ACGAAGACGGCAGCAAAGGTGAAGCCACATCAGACATaGCTGAGGTCTTGTCAGCCAAGCATTGGTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKTAAKVKPHQT*LRSCQPSIGGL Trigger: GAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTCACCTTTGCTGCCGTCTTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS CAA 72 bp | AGCAAAGGTGAAGCCACATCAGACATGACTGAGGTCTaGTCAGCCAAGCATTGGTGGGCTCCTCTCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKGEATSDMTEV*SAKHWWAPLPR Trigger: TCTGGGGAGAGGAGCCCACCAATGCTTGGCTGACAAGACCTCAGTCATGTCTGATGTGGCTTCACCTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529238.5 ENST00000671165.1 |
||
| CDS GCA 72 bp | ACCCAGGTTAGCTTTGCTGCTCTCGGTCATATTTGCTaGTTGTCCATCCCCTTCTTTCTTGAGGCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TQVSFAALGHIC*LSIPFFLEAQA Trigger: GGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS GCA 72 bp | GGGCAGGGCTTGCAGATCAAGGGGATCCACTGTCCATaGTGCGAAGAGGAAGATCAAAAACGCAACAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQGLQIKGIHCP*CEEEDQKRNSS Trigger: AGAACTGTTGCGTTTTTGATCTTCCTCTTCGCAGCATGGACAGTGGATCCCCTTGATCTGCAAGCCCTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS CAA 90 bp | ACCCTGACCCAGGTTAGCTTTGCTGCTCTCGGTCATATTTGCTGCTaGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TLTQVSFAALGHICC*SIPFFLEAQAYFVP Trigger: AGGCACAAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTGGGTCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS CAA 90 bp | CTCCATCTTCTAGGTCCCCATAGCCCTTCACTTGGCTTCTTCCACTaGGCTGTTGCCACCTGTTTCATAGCTGCATTGGTGGTCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHLLGPHSPSLGFFH*AVATCFIAALVVTL Trigger: CAGAGTGACCACCAATGCAGCTATGAAACAGGTGGCAACAGCCAAGTGGAAGAAGCCAAGTGAAGGGCTATGGGGACCTAGAAGATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528496.1 ENST00000665326.1 |
||
| CDS GCA 72 bp | CTGACCCAGGTTAGCTTTGCTGCTCTCGGTCATATTTaGTGCTTGTCCATCCCCTTCTTTCTTGAGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTQVSFAALGHI*CLSIPFFLEAQ Trigger: CTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTGGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS GCA 72 bp | CAGGGCTTGCAGATCAAGGGGATCCACTGTCCATGCTaGGAAGAGGAAGATCAAAAACGCAACAGTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLQIKGIHCPC*EEEDQKRNSSR Trigger: CCTAGAACTGTTGCGTTTTTGATCTTCCTCTTCGCAGCATGGACAGTGGATCCCCTTGATCTGCAAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665326.1 |
||
| CDS CAA 72 bp | CAGGTTAGCTTTGCTGCTCTCGGTCATATTTGCTGCTaGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QVSFAALGHICC*SIPFFLEAQAY Trigger: GTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAATATGACCGAGAGCAGCAAAGCTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS CAA 72 bp | AATTGTTCTTCCCTACCTGGGGCCCCTTCCTTGTTGTaGCTTACTTATCAGGACCCATCACTGACACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: NCSSLPGAPSLL*LTYQDPSLTPP Trigger: GGGTGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 90 bp | CTTGGCTTCTTCCACTTGGCTGTTGCCACCTGTTTCATAGCTGCATaGGTGGTCACTCTGAGTTTTAGTTCTTCTGTCTCTTTGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGFFHLAVATCFIAA*VVTLSFSSSVSLPP Trigger: CGGGGGCAAAGAGACAGAAGAACTAAAACTCAGAGTGACCACCAATGCAGCTATGAAACAGGTGGCAACAGCCAAGTGGAAGAAGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528496.1 ENST00000665326.1 |
||
| CDS CAA 90 bp | ACAGTCTCTCAGAACAATTGTTCTTCCCTACCTGGGGCCCCTTCCTaGTTGTTGCTTACTTATCAGGACCCATCACTGACACCACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TVSQNNCSSLPGAPS*LLLTYQDPSLTPPC Trigger: ACAGGGTGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTGAGAGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 72 bp | TTGGTGGTCACTCTGAGTTTTAGTTCTTCTGTCTCTTaGCCCCCGGATTTGATCTTGAGCTCCCTGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVVTLSFSSSVS*PPDLILSSLEA Trigger: GGCTTCCAGGGAGCTCAAGATCAAATCCGGGGGCAAAGAGACAGAAGAACTAAAACTCAGAGTGACCACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528496.1 ENST00000665326.1 |
||
| CDS CAA 90 bp | GTCTCTCAGAACAATTGTTCTTCCCTACCTGGGGCCCCTTCCTTGTaGTTGCTTACTTATCAGGACCCATCACTGACACCACCCTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VSQNNCSSLPGAPSL*LLTYQDPSLTPPCY Trigger: ATAACAGGGTGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 72 bp | AACAATTGTTCTTCCCTACCTGGGGCCCCTTCCTTGTaGTTGCTTACTTATCAGGACCCATCACTGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: NNCSSLPGAPSL*LLTYQDPSLTP Trigger: TGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 72 bp | CAGAACAATTGTTCTTCCCTACCTGGGGCCCCTTCCTaGTTGTTGCTTACTTATCAGGACCCATCACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: QNNCSSLPGAPS*LLLTYQDPSLT Trigger: TGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 90 bp | TCTCAGAACAATTGTTCTTCCCTACCTGGGGCCCCTTCCTTGTTGTaGCTTACTTATCAGGACCCATCACTGACACCACCCTGTTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQNNCSSLPGAPSLL*LTYQDPSLTPPCYS Trigger: AGAATAACAGGGTGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 72 bp | TGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTaGTGCCTCTCAAGAACTGTGAAGAGCCTGATATTT | + |
|
Preference number: 6 (lower is better) Translates to: CPSPSFLRLRPT*CLSRTVKSLIF Trigger: AAATATCAGGCTCTTCACAGTTCTTGAGAGGCACAAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS CAA 72 bp | CCACGATCCCTATTGAGAGATGGAAAATCAGAGGAATaGATAAACCTTCTCCCATTCATTCGGCTGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSLLRDGKSEE*INLLPFIRLPS Trigger: GGACGGCAGCCGAATGAATGGGAGAAGGTTTATCAATTCCTCTGATTTTCCATCTCTCAATAGGGATCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671165.1 |
||
| CDS CAA 72 bp | TTCCACTTGGCTGTTGCCACCTGTTTCATAGCTGCATaGGTGGTCACTCTGAGTTTTAGTTCTTCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FHLAVATCFIAA*VVTLSFSSSVS Trigger: AGAGACAGAAGAACTAAAACTCAGAGTGACCACCAATGCAGCTATGAAACAGGTGGCAACAGCCAAGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528496.1 ENST00000665326.1 |
||
| CDS CAA 72 bp | AGCAGGTTGTTTGTGATTAACAGTCTCTCAGAACAATaGTTCTTCCCTACCTGGGGCCCCTTCCTTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLFVINSLSEQ*FFPTWGPFLVV Trigger: AACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTGAGAGACTGTTAATCACAAACAACCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS TCA 72 bp | GAAAAACAACAAAGCGCTGGCTTGTGTCAAATCTTGTaGGGCACCAGAATCTTTGTCTGCACTGTAACATCC | + |
|
Preference number: 6 (lower is better) Translates to: EKQQSAGLCQIL*GTRIFVCTVTS Trigger: GGATGTTACAGTGCAGACAAAGATTCTGGTGCCTCACAAGATTTGACACAAGCCAGCGCTTTGTTGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000529238.5 ENST00000529827.1 ENST00000671165.1 |
||
| CDS CCA 72 bp | ATTAACAGTCTCTCAGAACAATTGTTCTTCCCTACCTaGGGCCCCTTCCTTGTTGTTGCTTACTTATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: INSLSEQLFFPT*GPFLVVAYLSG Trigger: TCCTGATAAGTAAGCAACAACAAGGAAGGGGCCCCAGGTAGGGAAGAACAATTGTTCTGAGAGACTGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CAA 90 bp | TTTGCTGCTTGTCCATCCCCTTCTTTCTTGAGGCTCAGGCCTACTTaGTGCCTCTCAAGAACTGTGAAGAGCCTGATATTTTATAATACT | + |
|
Preference number: 6 (lower is better) Translates to: FAACPSPSFLRLRPT*CLSRTVKSLIFYNT Trigger: AGTATTATAAAATATCAGGCTCTTCACAGTTCTTGAGAGGCACAAAGTAGGCCTGAGCCTCAAGAAAGAAGGGGATGGACAAGCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529827.1 |
||
| CDS TCA 72 bp | GAGCTTCATTCCTCTAATGGGGCACTGTCTTGTGTTTaGACAGTGTCTATGGTTCTTAGGAATTTAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELHSSNGALSCV*TVSMVLRNLSF Trigger: GAAGCTTAAATTCCTAAGAACCATAGACACTGTTCAAACACAAGACAGTGCCCCATTAGAGGAATGAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671165.1 |
||
| CDS TCA 72 bp | CTTCCTTGTTGTTGCTTACTTATCAGGACCCATCACTaGCACCACCCTGTTATTCTTTTCCCTTATAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: LPCCCLLIRTHH*HHPVILFPYKY Trigger: GTATTTATAAGGGAAAAGAATAACAGGGTGGTGTCAGTGATGGGTCCTGATAAGTAAGCAACAACAAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528496.1 |
||
| CDS CCA 72 bp | AACTCATTAACTACAAGGAAGACCACGGTCCATGCTTaGCTATTCTTTGTAAATACGAGTAAGCTTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSLTTRKTTVHA*LFFVNTSKLLS Trigger: AGAAAGAAGCTTACTCGTATTTACAAAGAATAGCCAAGCATGGACCGTGGTCTTCCTTGTAGTTAATGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671165.1 |
||