Pregenerated sensors for LINC02757 (Homo sapiens)
Ensembl gene IDs: ENSG00000255363Ensembl transcript IDs: ENST00000532413.1, ENST00000637683.1, ENST00000656117.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCAGACTCTCCGTGGTGCTTGCGCCTCCTTCCAGCAGCTGCCCCTaGCACGCCCCTTTGCTCCCTCGGTGCAGAAGCTGCCTGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PRLSVVLAPPSSSCP*HAPLLPRCRSCLPS Trigger: AGAGGGCAGGCAGCTTCTGCACCGAGGGAGCAAAGGGGCGTGTCAGGGGCAGCTGCTGGAAGGAGGCGCAAGCACCACGGAGAGTCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637683.1 ENST00000656117.1 |
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| CDS CCA 90 bp | CCCACAGTGTCAGTCCCCAGGGCAACCCTTCCAGGGCTCCTTGGCTaGGCATCCCAGACTCTCCGTGGTGCTTGCGCCTCCTTCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PTVSVPRATLPGLLG*ASQTLRGACASFQQ Trigger: CTGCTGGAAGGAGGCGCAAGCACCACGGAGAGTCTGGGATGCCCAGCCAAGGAGCCCTGGAAGGGTTGCCCTGGGGACTGACACTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000532413.1 ENST00000637683.1 ENST00000656117.1 |
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| CDS CCA 90 bp | AGAGCCCACAGTGTCAGTCCCCAGGGCAACCCTTCCAGGGCTCCTTaGCTGGGCATCCCAGACTCTCCGTGGTGCTTGCGCCTCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: RAHSVSPQGNPSRAP*LGIPDSPWCLRLLP Trigger: TGGAAGGAGGCGCAAGCACCACGGAGAGTCTGGGATGCCCAGCCAAGGAGCCCTGGAAGGGTTGCCCTGGGGACTGACACTGTGGGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000532413.1 ENST00000637683.1 ENST00000656117.1 |
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| CDS GCA 90 bp | GCTGCCCCTGACACGCCCCTTTGCTCCCTCGGTGCAGAAGCTGCCTaGCCTCTTCAGAGTGTGCATCCTCTCTGCATTTGCTGTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AAPDTPLCSLGAEAA*PLQSVHPLCICCSC Trigger: GCAGGAACAGCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGCAGCTTCTGCACCGAGGGAGCAAAGGGGCGTGTCAGGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS GCA 90 bp | CCCTTTGCTCCCTCGGTGCAGAAGCTGCCTGCCCTCTTCAGAGTGTaGATCCTCTCTGCATTTGCTGTTCCTGCGCCGTTTCCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PFAPSVQKLPALFRV*ILSAFAVPAPFPLW Trigger: CCAAAGAGGAAACGGCGCAGGAACAGCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGCAGCTTCTGCACCGAGGGAGCAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS GCA 90 bp | CTCAGGAGTGAAGCTGCAGATCTTCGCAGTGAGCGTTACAGCTCCTaGATGCCTGCAGCTCGCCCATGCTGCACACGGTGTGTACACCTT | + |
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Preference number: 5 (lower is better) Translates to: LRSEAADLRSERYSS*MPAARPCCTRCVHL Trigger: AAGGTGTACACACCGTGTGCAGCATGGGCGAGCTGCAGGCATGCAGGAGCTGTAACGCTCACTGCGAAGATCTGCAGCTTCACTCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS TCA 90 bp | GTTACAGCTCCAAGACCACCAGGGCTCATCAGGGAGGCTGGGATTTaGAGCCAGGTCTGCGTAGCTCTGAAGGCCTTTTTCTTGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: VTAPRPPGLIREAGI*SQVCVALKAFFLPL Trigger: CAGTGGCAAGAAAAAGGCCTTCAGAGCTACGCAGACCTGGCTTCAAATCCCAGCCTCCCTGATGAGCCCTGGTGGTCTTGGAGCTGTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 90 bp | ACTGTGTGGGCAACCACAGAACCACATGTGGGGTTTACCACCGCTTaGCCAAGCCCGGAAGAACAAGAGAATGCTCCTGACGACAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: TVWATTEPHVGFTTA*PSPEEQENAPDDRG Trigger: TCCTCTGTCGTCAGGAGCATTCTCTTGTTCTTCCGGGCTTGGCCAAGCGGTGGTAAACCCCACATGTGGTTCTGTGGTTGCCCACACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 90 bp | TGTTGGCTATTTTTAGGACTGTGTGGGCAACCACAGAACCACATGTaGGGTTTACCACCGCTTGGCCAAGCCCGGAAGAACAAGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: CWLFLGLCGQPQNHM*GLPPLGQARKNKRM Trigger: CATTCTCTTGTTCTTCCGGGCTTGGCCAAGCGGTGGTAAACCCCACATGTGGTTCTGTGGTTGCCCACACAGTCCTAAAAATAGCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 90 bp | AGCTCCATGTGGGCAGGGACTGTGTCATTTTGTGTCCGGAATTGGTaGGTTCTTGGTCTCATTGACTTCAAGAATGAAGCTGCGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: SSMWAGTVSFCVRNW*VLGLIDFKNEAADP Trigger: AGGGTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCCCTGCCCACATGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 90 bp | GTCAGCTCCATGTGGGCAGGGACTGTGTCATTTTGTGTCCGGAATTaGTGGGTTCTTGGTCTCATTGACTTCAAGAATGAAGCTGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: VSSMWAGTVSFCVRN*WVLGLIDFKNEAAD Trigger: GTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCCCTGCCCACATGGAGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS TCA 72 bp | TCCGTGGTGCTTGCGCCTCCTTCCAGCAGCTGCCCCTaGCACGCCCCTTTGCTCCCTCGGTGCAGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVVLAPPSSSCP*HAPLLPRCRSC Trigger: GCAGCTTCTGCACCGAGGGAGCAAAGGGGCGTGTCAGGGGCAGCTGCTGGAAGGAGGCGCAAGCACCACGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637683.1 ENST00000656117.1 |
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| CDS CCA 72 bp | TCAGTCCCCAGGGCAACCCTTCCAGGGCTCCTTGGCTaGGCATCCCAGACTCTCCGTGGTGCTTGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SVPRATLPGLLG*ASQTLRGACAS Trigger: GGAGGCGCAAGCACCACGGAGAGTCTGGGATGCCCAGCCAAGGAGCCCTGGAAGGGTTGCCCTGGGGACTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000532413.1 ENST00000637683.1 ENST00000656117.1 |
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| CDS GCA 72 bp | GACACGCCCCTTTGCTCCCTCGGTGCAGAAGCTGCCTaGCCTCTTCAGAGTGTGCATCCTCTCTGCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: DTPLCSLGAEAA*PLQSVHPLCIC Trigger: GCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGCAGCTTCTGCACCGAGGGAGCAAAGGGGCGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS GCA 72 bp | GAAGCTGCAGATCTTCGCAGTGAGCGTTACAGCTCCTaGATGCCTGCAGCTCGCCCATGCTGCACACGGTGT | + |
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Preference number: 6 (lower is better) Translates to: EAADLRSERYSS*MPAARPCCTRC Trigger: ACACCGTGTGCAGCATGGGCGAGCTGCAGGCATGCAGGAGCTGTAACGCTCACTGCGAAGATCTGCAGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS CCA 72 bp | TACAGCTCCAAGACCACCAGGGCTCATCAGGGAGGCTaGGATTTGAAGCCAGGTCTGCGTAGCTCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: YSSKTTRAHQGG*DLKPGLRSSEG Trigger: GCCTTCAGAGCTACGCAGACCTGGCTTCAAATCCCAGCCTCCCTGATGAGCCCTGGTGGTCTTGGAGCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 90 bp | TCTGCATGCCTGCAGCTCGCCCATGCTGCACACGGTGTGTACACCTaGCCTTTTCTGGCTCCTTTGTTGCTGAGCGATCATCCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SACLQLAHAAHGVYT*PFLAPLLLSDHPGF Trigger: GAAGCCTGGATGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTGTGCAGCATGGGCGAGCTGCAGGCATGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | CTGCAGCTCGCCCATGCTGCACACGGTGTGTACACCTaGCCTTTTCTGGCTCCTTTGTTGCTGAGCGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LQLAHAAHGVYT*PFLAPLLLSDP Trigger: AGGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTGTGCAGCATGGGCGAGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532413.1 ENST00000656117.1 |
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| CDS CAA 90 bp | CGTTACAGCTCCAAGACCACCAGGGCTCATCAGGGAGGCTGGGATTaGAAGCCAGGTCTGCGTAGCTCTGAAGGCCTTTTTCTTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RYSSKTTRAHQGGWD*KPGLRSSEGLFLAT Trigger: AGTGGCAAGAAAAAGGCCTTCAGAGCTACGCAGACCTGGCTTCAAATCCCAGCCTCCCTGATGAGCCCTGGTGGTCTTGGAGCTGTAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS GCA 72 bp | GCCTGCCCTCTTCAGAGTGTGCATCCTCTCTGCATTTaGTGTTCCTGCGCCGTTTCCTCTTTGGGAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: ACPLQSVHPLCI*CSCAVSSLGTP Trigger: AGGAGTTCCCAAAGAGGAAACGGCGCAGGAACAGCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS GCA 72 bp | GAAGCTGCCTGCCCTCTTCAGAGTGTGCATCCTCTCTaGATTTGCTGTTCCTGCGCCGTTTCCTCTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: EAACPLQSVHPL*ICCSCAVSSLG Trigger: TCCCAAAGAGGAAACGGCGCAGGAACAGCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGCAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS CCA 72 bp | CTCCAGTCCATCTTCTGTTCAGCTGCCTGGGTGACTTaGCTAAAACACAGAGCCCACAGTGTCAGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQSIFCSAAWVT*LKHRAHSVSPQ Trigger: CTGGGGACTGACACTGTGGGCTCTGTGTTTTAGCCAAGTCACCCAGGCAGCTGAACAGAAGATGGACTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000532413.1 ENST00000637683.1 ENST00000656117.1 |
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| CDS CCA 72 bp | GCAACCACAGAACCACATGTGGGGTTTACCACCGCTTaGCCAAGCCCGGAAGAACAAGAGAATGCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: ATTEPHVGFTTA*PSPEEQENAPD Trigger: GTCAGGAGCATTCTCTTGTTCTTCCGGGCTTGGCCAAGCGGTGGTAAACCCCACATGTGGTTCTGTGGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 72 bp | AGATGTGTTCGGAGTTTCTTCCTTCGGGTGGGTTCGTaGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: RCVRSFFLRVGS*SRWLRSEAADL Trigger: AAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGAACCCACCCGAAGGAAGAAACTCCGAACACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000637683.1 ENST00000656117.1 |
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| CDS CAA 72 bp | CCTCCAGTCCATCTTCTGTTCAGCTGCCTGGGTGACTaGGCTAAAACACAGAGCCCACAGTGTCAGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PPVHLLFSCLGD*AKTQSPQCQSP Trigger: TGGGGACTGACACTGTGGGCTCTGTGTTTTAGCCAAGTCACCCAGGCAGCTGAACAGAAGATGGACTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000532413.1 ENST00000637683.1 ENST00000656117.1 |
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| CDS CAA 72 bp | CACGGTGTGTACACCTTGCCTTTTCTGGCTCCTTTGTaGCTGAGCGATCATCCAGGCTTCTCCCTCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: HGVYTLPFLAPL*LSDHPGFSLQS Trigger: GGACTGGAGGGAGAAGCCTGGATGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | GCACACGGTGTGTACACCTTGCCTTTTCTGGCTCCTTaGTTGCTGAGCGATCATCCAGGCTTCTCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AHGVYTLPFLAP*LLSDHPGFSLQ Trigger: CTGGAGGGAGAAGCCTGGATGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | CTGCAGCTCGCCCATGCTGCACACGGTGTGTACACCTaGCCTTTTCTGGCTCCTTTGTTGCTGAGCGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LQLAHAAHGVYT*PFLAPLLLSDH Trigger: ATGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTGTGCAGCATGGGCGAGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | TCCAAGACCACCAGGGCTCATCAGGGAGGCTGGGATTaGAAGCCAGGTCTGCGTAGCTCTGAAGGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SKTTRAHQGGWD*KPGLRSSEGLF Trigger: AAAAAGGCCTTCAGAGCTACGCAGACCTGGCTTCAAATCCCAGCCTCCCTGATGAGCCCTGGTGGTCTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | TGCCTGCCCTCTTCAGAGTGTGCATCCTCTCTGCATTaGCTGTTCCTGCGCCGTTTCCTCTTTGGGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: CLPSSECASSLH*LFLRRFLFGNS Trigger: GGAGTTCCCAAAGAGGAAACGGCGCAGGAACAGCAAATGCAGAGAGGATGCACACTCTGAAGAGGGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656117.1 |
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| CDS CCA 72 bp | TTTTTAGGACTGTGTGGGCAACCACAGAACCACATGTaGGGTTTACCACCGCTTGGCCAAGCCCGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FLGLCGQPQNHM*GLPPLGQARKN Trigger: GTTCTTCCGGGCTTGGCCAAGCGGTGGTAAACCCCACATGTGGTTCTGTGGTTGCCCACACAGTCCTAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | CACGGTGTGTACACCTTGCCTTTTCTGGCTCCTTTGTaGCTGAGCGATCCTACATCCAGGCTTCTCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HGVYTLPFLAPL*LSDPTSRLLPP Trigger: TGGAGGGAGAAGCCTGGATGTAGGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532413.1 ENST00000656117.1 |
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| CDS CAA 72 bp | GCACACGGTGTGTACACCTTGCCTTTTCTGGCTCCTTaGTTGCTGAGCGATCCTACATCCAGGCTTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: AHGVYTLPFLAP*LLSDPTSRLLP Trigger: AGGGAGAAGCCTGGATGTAGGATCGCTCAGCAACAAAGGAGCCAGAAAAGGCAAGGTGTACACACCGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532413.1 ENST00000656117.1 |
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| CDS CAA 90 bp | TGTGGGCAGGGACTGTGTCATTTTGTGTCCGGAATTGGTGGGTTCTaGGTCTCATTGACTTCAAGAATGAAGCTGCGGACCCTCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: CGQGLCHFVSGIGGF*VSLTSRMKLRTLAV Trigger: CACCGCGAGGGTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCCCTGCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | CATTTTGTGTCCGGAATTGGTGGGTTCTTGGTCTCATaGACTTCAAGAATGAAGCTGCGGACCCTCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: HFVSGIGGFLVS*TSRMKLRTLAV Trigger: CACCGCGAGGGTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 90 bp | GGACTGTGTCATTTTGTGTCCGGAATTGGTGGGTTCTTGGTCTCATaGACTTCAAGAATGAAGCTGCGGACCCTCGCGGTGAGTGTTACA | + |
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Preference number: 6 (lower is better) Translates to: GLCHFVSGIGGFLVS*TSRMKLRTLAVSVT Trigger: TGTAACACTCACCGCGAGGGTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 72 bp | GGACTGTGTCATTTTGTGTCCGGAATTGGTGGGTTCTaGGTCTCATTGACTTCAAGAATGAAGCTGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: GLCHFVSGIGGF*VSLTSRMKLRT Trigger: GGTCCGCAGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 72 bp | TGGGCAGGGACTGTGTCATTTTGTGTCCGGAATTGGTaGGTTCTTGGTCTCATTGACTTCAAGAATGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: WAGTVSFCVRNW*VLGLIDFKNEA Trigger: AGCTTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCCCTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CCA 72 bp | ATGTGGGCAGGGACTGTGTCATTTTGTGTCCGGAATTaGTGGGTTCTTGGTCTCATTGACTTCAAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: MWAGTVSFCVRN*WVLGLIDFKNE Trigger: TTCATTCTTGAAGTCAATGAGACCAAGAACCCACCAATTCCGGACACAAAATGACACAGTCCCTGCCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637683.1 |
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| CDS CAA 90 bp | CATACACTTCCGTGGATAAACAGGTACATGTACTCAATTCACTTATaGTGTAAAGTTGTATACACATTGCAACTCACACAAACACATGCA | + |
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Preference number: 6 (lower is better) Translates to: HTLPWINRYMYSIHL*CKVVYTLQLTQTHA Trigger: TGCATGTGTTTGTGTGAGTTGCAATGTGTATACAACTTTACACAATAAGTGAATTGAGTACATGTACCTGTTTATCCACGGAAGTGTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532413.1 |
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| CDS CCA 72 bp | ACATATTTACATATGTCCAGTCATCATACACTTCCGTaGATAAACAGGTACATGTACTCAATTCACTTATTG | + |
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Preference number: 6 (lower is better) Translates to: TYLHMSSHHTLP*INRYMYSIHLL Trigger: CAATAAGTGAATTGAGTACATGTACCTGTTTATCCACGGAAGTGTATGATGACTGGACATATGTAAATATGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532413.1 |
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