Pregenerated sensors for LINC02755 (Homo sapiens)
Ensembl gene IDs: ENSG00000254530Ensembl transcript IDs: ENST00000525097.1, ENST00000528553.2, ENST00000653616.1, ENST00000657392.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATATATTGTAGGTCTCACGGTTCTTCTGCACAGGACTGGGAATTATaGGATCCAAGCTGGGTTTGGCTGTGCTTGAATCCAGGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYCRSHGSSAQDWEL*DPSWVWLCLNPGSG Trigger: CCCAGAGCCTGGATTCAAGCACAGCCAAACCCAGCTTGGATCTCATAATTCCCAGTCCTGTGCAGAAGAACCGTGAGACCTACAATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS GCA 90 bp | GTCAGCTTCACCGGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTaGTGGATGCTTGATTTTGAGGTGTTACCATGCTACTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSFTGSLFLVFFGFS*WMLDFEVLPCYCLH Trigger: ATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCCGGTGAAGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CCA 90 bp | AGCTTCACCGGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTaGATGCTTGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFTGSLFLVFFGFSC*MLDFEVLPCYCLHL Trigger: CAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCCGGTGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS GCA 90 bp | TCACCGGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: SPAACSLCFSDSAAG*LILRCYHATASICI Trigger: GATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCCGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CCA 90 bp | GGGTTCATTTCAAGTCTAATCCATTTGCCTCTCCTTATTCTGGGGTaGTATGTCCTTCTCATGGTGATGACACCTGAGTCAGGGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GFISSLIHLPLLILG*YVLLMVMTPESGRT Trigger: TGTTCTCCCTGACTCAGGTGTCATCACCATGAGAAGGACATACCACCCCAGAATAAGGAGAGGCAAATGGATTAGACTTGAAATGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS GCA 90 bp | TTGAGACCACCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: LRPPCSLCFSDSAAG*LILRCYHATASICI Trigger: GATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGGTGGTCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 90 bp | TTTTCTGAAATCCTAGCTTCCACAGCTTATCTTCTTTGTTGCAACTaGATGATTCCAGCCCTGCCTGGTGTCTTACTGCAAGATGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FSEILASTAYLLCCN*MIPALPGVLLQDAR Trigger: ACGAGCATCTTGCAGTAAGACACCAGGCAGGGCTGGAATCATGCAGTTGCAACAAAGAAGATAAGCTGTGGAAGCTAGGATTTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CCA 90 bp | ATTATGAGATCCAAGCTGGGTTTGGCTGTGCTTGAATCCAGGCTCTaGGTTCATTTCAAGTCTAATCCATTTGCCTCTCCTTATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IMRSKLGLAVLESRL*VHFKSNPFASPYSG Trigger: CCCAGAATAAGGAGAGGCAAATGGATTAGACTTGAAATGAACCCAGAGCCTGGATTCAAGCACAGCCAAACCCAGCTTGGATCTCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CCA 90 bp | CTTCTTTGTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTaGATGCTTGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLCCNLFLVFFGFSC*MLDFEVLPCYCLHL Trigger: CAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAACAAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS GCA 90 bp | TTTGTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: FVATCSLCFSDSAAG*LILRCYHATASICI Trigger: GATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS GCA 90 bp | TATCTTCTTTGTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTaGTGGATGCTTGATTTTGAGGTGTTACCATGCTACTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YLLCCNLFLVFFGFS*WMLDFEVLPCYCLH Trigger: ATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAACAAAGAAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS GCA 90 bp | TCTAAATTTTCTGAAATCCTAGCTTCCACAGCTTATCTTCTTTGTTaGAACTGCATGATTCCAGCCCTGCCTGGTGTCTTACTGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKFSEILASTAYLLC*NCMIPALPGVLLQD Trigger: ATCTTGCAGTAAGACACCAGGCAGGGCTGGAATCATGCAGTTGCAACAAAGAAGATAAGCTGTGGAAGCTAGGATTTCAGAAAATTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CCA 90 bp | AGAGTAGAGGTATTGTTGCAGCTTCAGAAAGTCTCACTTCACCTCTaGCTTCACTCCAAATTTTTGAGACCACCTTGTTCCTTGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RVEVLLQLQKVSLHL*LHSKFLRPPCSLCF Trigger: AAAACACAAGGAACAAGGTGGTCTCAAAAATTTGGAGTGAAGCCAGAGGTGAAGTGAGACTTTCTGAAGCTGCAACAATACCTCTACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS CCA 90 bp | GGGTTCATTTCAAGTCTAATCCATTTGCCTCTCCTTATTCTGGGGTaGTATGTCCTTCTCATGGTGATGACACCAGAAATTGCTTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GFISSLIHLPLLILG*YVLLMVMTPEIALS Trigger: ACTTAAAGCAATTTCTGGTGTCATCACCATGAGAAGGACATACCACCCCAGAATAAGGAGAGGCAAATGGATTAGACTTGAAATGAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 90 bp | TGCATTAAATTTACAGCAGAATGGAAATCTGAATGCCGGGCTCTCTaGAGTTTCAGCTTTATCCTTGATTGGCACTTGTCCTTAAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: CIKFTAEWKSECRAL*SFSFILDWHLSLNL Trigger: TAGATTTAAGGACAAGTGCCAATCAAGGATAAAGCTGAAACTGCAGAGAGCCCGGCATTCAGATTTCCATTCTGCTGTAAATTTAATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS TCA 72 bp | AGGTCTCACGGTTCTTCTGCACAGGACTGGGAATTATaGGATCCAAGCTGGGTTTGGCTGTGCTTGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSHGSSAQDWEL*DPSWVWLCLNP Trigger: TGGATTCAAGCACAGCCAAACCCAGCTTGGATCTCATAATTCCCAGTCCTGTGCAGAAGAACCGTGAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CAA 90 bp | CGGTTCTTCTGCACAGGACTGGGAATTATGAGATCCAAGCTGGGTTaGGCTGTGCTTGAATCCAGGCTCTGGGTTCATTTCAAGTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RFFCTGLGIMRSKLG*AVLESRLWVHFKSN Trigger: ATTAGACTTGAAATGAACCCAGAGCCTGGATTCAAGCACAGCCAAACCCAGCTTGGATCTCATAATTCCCAGTCCTGTGCAGAAGAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CAA 90 bp | CCGGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATGCTaGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PAACSLCFSDSAAGC*ILRCYHATASICIC Trigger: ACAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CAA 90 bp | CTGTGCTTGAATCCAGGCTCTGGGTTCATTTCAAGTCTAATCCATTaGCCTCTCCTTATTCTGGGGTGGTATGTCCTTCTCATGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LCLNPGSGFISSLIH*PLLILGWYVLLMVM Trigger: CATCACCATGAGAAGGACATACCACCCCAGAATAAGGAGAGGCAAATGGATTAGACTTGAAATGAACCCAGAGCCTGGATTCAAGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS GCA 72 bp | CCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PCSLCFSDSAAG*LILRCYHATAS Trigger: GGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 72 bp | TGCTGGATGCTTGATTTTGAGGTGTTACCATGCTACTaGCTCCATCTGTATCTTGGGACTGAAGGAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CWMLDFEVLPCY*LHLYLGTEGSS Trigger: GCTACTTCCTTCAGTCCCAAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528553.2 |
||
| CDS GCA 72 bp | GCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACSLCFSDSAAG*LILRCYHATAS Trigger: GGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS GCA 72 bp | ACCGGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTaGTGGATGCTTGATTTTGAGGTGTTACCATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TGSLFLVFFGFS*WMLDFEVLPCY Trigger: GTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS GCA 72 bp | ATCCTAGCTTCCACAGCTTATCTTCTTTGTTGCAACTaGATGATTCCAGCCCTGCCTGGTGTCTTACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ILASTAYLLCCN*MIPALPGVLLQ Trigger: TTGCAGTAAGACACCAGGCAGGGCTGGAATCATGCAGTTGCAACAAAGAAGATAAGCTGTGGAAGCTAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CCA 72 bp | GGCAGCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTaGATGCTTGATTTTGAGGTGTTACCATGCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLFLVFFGFSC*MLDFEVLPCYC Trigger: GCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653616.1 |
||
| CDS CAA 90 bp | AGACCACCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATGCTaGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPPCSLCFSDSAAGC*ILRCYHATASICIC Trigger: ACAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGGTGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 72 bp | GAGACCACCTTGTTCCTTGTGTTTTTCGGATTCAGCTaGTGGATGCTTGATTTTGAGGTGTTACCATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: ETTLFLVFFGFS*WMLDFEVLPCY Trigger: GTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGGTGGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 72 bp | ACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATaGTTGATTTTGAGGTGTTACCATGCTACTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TCSLCFSDSAAG*LILRCYHATAS Trigger: GGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS GCA 72 bp | GTGTTCATTACATGGAAAGAAAGACGGCTGATGAAGTaGCAGATTCCCAGGAACGGTGATAAGCAACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VFITWKERRLMK*QIPRNGDKQQQ Trigger: TTGCTGTTGCTTATCACCGTTCCTGGGAATCTGGCACTTCATCAGCCGTCTTTCTTTCCATGTAATGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CCA 72 bp | ACCACCTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTaGATGCTTGATTTTGAGGTGTTACCATGCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TTLFLVFFGFSC*MLDFEVLPCYC Trigger: GCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS CAA 72 bp | TGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATGCTaGATTTTGAGGTGTTACCATGCTACTGCCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: CSLCFSDSAAGC*ILRCYHATASI Trigger: GATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CAA 72 bp | TCACCTCTGGCTTCACTCCAAATTTTTGAGACCACCTaGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SPLASLQIFETT*FLVFFGFSCWM Trigger: CATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGGTGGTCTCAAAAATTTGGAGTGAAGCCAGAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS CAA 72 bp | AATCCAGGCTCTGGGTTCATTTCAAGTCTAATCCATTaGCCTCTCCTTATTCTGGGGTGGTATGTCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NPGSGFISSLIH*PLLILGWYVLL Trigger: GAGAAGGACATACCACCCCAGAATAAGGAGAGGCAAATGGATTAGACTTGAAATGAACCCAGAGCCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525097.1 ENST00000528553.2 ENST00000653616.1 ENST00000657392.1 |
||
| CDS CAA 90 bp | GTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATGCTaGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VATCSLCFSDSAAGC*ILRCYHATASICIL Trigger: CAAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528553.2 |
||
| CDS CAA 90 bp | GTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTGGATGCTaGATTTTGAGGTGTTACCATGCTACTGCCTCCATCTGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VATCSLCFSDSAAGC*ILRCYHATASICIC Trigger: ACAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657392.1 |
||
| CDS CCA 72 bp | GTATTGTTGCAGCTTCAGAAAGTCTCACTTCACCTCTaGCTTCACTCCAAATTTTTGAGACCACCTTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLLQLQKVSLHL*LHSKFLRPPCS Trigger: GGAACAAGGTGGTCTCAAAAATTTGGAGTGAAGCCAGAGGTGAAGTGAGACTTTCTGAAGCTGCAACAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS CCA 72 bp | TGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTGCTaGATGCTTGATTTTGAGGTGTTACCATGCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CNLFLVFFGFSC*MLDFEVLPCYC Trigger: GCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS TCA 72 bp | AAGTCTCACTTCACCTCTGGCTTCACTCCAAATTTTTaGGACCACCTTGTTCCTTGTGTTTTTCGGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KSHFTSGFTPNF*DHLVPCVFRIQ Trigger: CTGAATCCGAAAAACACAAGGAACAAGGTGGTCTCAAAAATTTGGAGTGAAGCCAGAGGTGAAGTGAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525097.1 |
||
| CDS GCA 72 bp | TGTTGCAACTTGTTCCTTGTGTTTTTCGGATTCAGCTaGTGGATGCTTGATTTTGAGGTGTTACCATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CCNLFLVFFGFS*WMLDFEVLPCY Trigger: GTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAATCCGAAAAACACAAGGAACAAGTTGCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000528553.2 ENST00000657392.1 |
||
| CDS GCA 72 bp | TTCAGCTGCTGGATGCTTGATTTTGAGGTGTTACCATaGTACTGCCTCCATCTGTATCTGTTTAATAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: FSCWMLDFEVLP*YCLHLYLFNKT Trigger: GGTTTTATTAAACAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCAGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000525097.1 ENST00000653616.1 |
||
| CDS GCA 72 bp | TGCTGGATGCTTGATTTTGAGGTGTTACCATGCTACTaGCTCCATCTGTATCTGTTTAATAAAACCACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CWMLDFEVLPCY*LHLYLFNKTTR Trigger: TCTTGTGGTTTTATTAAACAGATACAGATGGAGGCAGTAGCATGGTAACACCTCAAAATCAAGCATCCAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000525097.1 ENST00000653616.1 |
||