Pregenerated sensors for LINC02750 (Homo sapiens)
Ensembl gene IDs: ENSG00000254518Ensembl transcript IDs: ENST00000525654.1, ENST00000529219.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCTGGCTGATCCTCAAGCCCTCAGTCTGGCAGGCTGCAATGCTGTaGTGGGATCATAGCTCACTGGAGCCTTCAACCTTGGGGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: TWLILKPSVWQAAML*WDHSSLEPSTLGFK Trigger: CTTGAACCCCAAGGTTGAAGGCTCCAGTGAGCTATGATCCCACCACAGCATTGCAGCCTGCCAGACTGAGGGCTTGAGGATCAGCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525654.1 |
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| CDS GCA 90 bp | TGCAACTCCAGCAACAAGTGTGAAACTCAGTCTGGCAGGCTGCAATaGTGTGGTGGGATCATAGCTCACTGGAGCCTTCAACCTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CNSSNKCETQSGRLQ*CGGIIAHWSLQPWG Trigger: ACCCCAAGGTTGAAGGCTCCAGTGAGCTATGATCCCACCACAGCATTGCAGCCTGCCAGACTGAGTTTCACACTTGTTGCTGGAGTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529219.1 |
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| CDS CCA 72 bp | GGCAGGCTGCAATGCTGTGGTGGGATCATAGCTCACTaGAGCCTTCAACCTTGGGGTTCAAGTAGCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLQCCGGIIAH*SLQPWGSSSWG Trigger: CCCCCAGCTACTTGAACCCCAAGGTTGAAGGCTCCAGTGAGCTATGATCCCACCACAGCATTGCAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525654.1 ENST00000529219.1 |
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| CDS CCA 72 bp | CTCAAGCCCTCAGTCTGGCAGGCTGCAATGCTGTGGTaGGATCATAGCTCACTGGAGCCTTCAACCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPSVWQAAMLW*DHSSLEPSTLG Trigger: CCCCAAGGTTGAAGGCTCCAGTGAGCTATGATCCCACCACAGCATTGCAGCCTGCCAGACTGAGGGCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525654.1 |
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| CDS CCA 72 bp | ATCCTCAAGCCCTCAGTCTGGCAGGCTGCAATGCTGTaGTGGGATCATAGCTCACTGGAGCCTTCAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: ILKPSVWQAAML*WDHSSLEPSTL Trigger: CAAGGTTGAAGGCTCCAGTGAGCTATGATCCCACCACAGCATTGCAGCCTGCCAGACTGAGGGCTTGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525654.1 |
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