Pregenerated sensors for LINC02747 (Homo sapiens)
Ensembl gene IDs: ENSG00000255774Ensembl transcript IDs: ENST00000542064.1, ENST00000645449.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAAGAGGCCAGACCATTCCCAGGCTGAAGGCTCGGGCTCGGGGGTaGGGCCAGGGCCAGTGGGCTTCCCCAGCTCACCTGCAGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: GRGQTIPRLKARARG*GQGQWASPAHLQNV Trigger: AACATTCTGCAGGTGAGCTGGGGAAGCCCACTGGCCCTGGCCTCACCCCCGAGCCCGAGCCTTCAGCCTGGGAATGGTCTGGCCTCTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 90 bp | AGGCTCCGGGAGCCAAGAGGTCCTCACAGGCTGTCACAACCTGGCTaGCTTCCGCTTCCCTCAGGACCTGCCACCTCCAAACCTCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RLREPRGPHRLSQPG*LPLPSGPATSKPLP Trigger: GGGCAGAGGTTTGGAGGTGGCAGGTCCTGAGGGAAGCGGAAGGCAGCCAGGTTGTGACAGCCTGTGAGGACCTCTTGGCTCCCGGAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542064.1 |
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| CDS CCA 90 bp | GAGAAGGCTCCGGGAGCCAAGAGGTCCTCACAGGCTGTCACAACCTaGCTGCCTTCCGCTTCCCTCAGGACCTGCCACCTCCAAACCTCT | + |
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Preference number: 5 (lower is better) Translates to: EKAPGAKRSSQAVTT*LPSASLRTCHLQTS Trigger: AGAGGTTTGGAGGTGGCAGGTCCTGAGGGAAGCGGAAGGCAGCCAGGTTGTGACAGCCTGTGAGGACCTCTTGGCTCCCGGAGCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542064.1 |
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| CDS GCA 90 bp | CACCGGCAGGCAACAGACGCTTGCTGGTGGGTGGTCGGGAGCACGTaGCTGGGGAGAGCTGCCTCCACACCATTCACTGATCTAATCAAT | + |
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Preference number: 5 (lower is better) Translates to: HRQATDACWWVVGST*LGRAASTPFTDLIN Trigger: ATTGATTAGATCAGTGAATGGTGTGGAGGCAGCTCTCCCCAGGCACGTGCTCCCGACCACCCACCAGCAAGCGTCTGTTGCCTGCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 90 bp | CCAGATACATCGCATGCACACGTCACCGTGACGACAGCCATGGGCTaGGCACATGAAGGCCTCAGATCCTACAGGAGGTTGCCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PDTSHAHVTVTTAMG*AHEGLRSYRRLPSA Trigger: GGCAGAGGGCAACCTCCTGTAGGATCTGAGGCCTTCATGTGCTCAGCCCATGGCTGTCGTCACGGTGACGTGTGCATGCGATGTATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS TCA 90 bp | GGTCGGGAGCACGTGCCTGGGGAGAGCTGCCTCCACACCATTCACTaGTCTAATCAATATCCTGCTCCTCCCGAGAACCCGATCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: GREHVPGESCLHTIH*SNQYPAPPENPITG Trigger: GCCTGTGATCGGGTTCTCGGGAGGAGCAGGATATTGATTAGATCAGTGAATGGTGTGGAGGCAGCTCTCCCCAGGCACGTGCTCCCGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 90 bp | GCCCCTCCTTCAGCTCGTGACATGCCACATCACCGTGGGACTCACTaGCCGCGTTCAAGAACAAGGATGGCCCAGATACATCGCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: APPSARDMPHHRGTH*PRSRTRMAQIHRMH Trigger: GTGCATGCGATGTATCTGGGCCATCCTTGTTCTTGAACGCGGGCAGTGAGTCCCACGGTGATGTGGCATGTCACGAGCTGAAGGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS TCA 90 bp | ATCGCATGCACACGTCACCGTGACGACAGCCATGGGCTGAGCACATaGAGGCCTCAGATCCTACAGGAGGTTGCCCTCTGCCTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: IACTRHRDDSHGLST*RPQILQEVALCLFS Trigger: TGAGAAGAGGCAGAGGGCAACCTCCTGTAGGATCTGAGGCCTTCATGTGCTCAGCCCATGGCTGTCGTCACGGTGACGTGTGCATGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS GCA 90 bp | TCATGTATCTGGCACCCCATAGGCGCTCAAATGGTGCAACGAGGATaGCACGGCCCTAACCTGCAAACACGTTTCCACGACTTCACGCCG | + |
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Preference number: 5 (lower is better) Translates to: SCIWHPIGAQMVQRG*HGPNLQTRFHDFTP Trigger: CGGCGTGAAGTCGTGGAAACGTGTTTGCAGGTTAGGGCCGTGGCATCCTCGTTGCACCATTTGAGCGCCTATGGGGTGCCAGATACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 90 bp | ATTCAATGGCTGTTTGCAGGTGGCCGTCTTCTTGTGGGGTCCTCGTaGGACAGAGAGCAGAGACAGAGCCGGTTCTCTGGGCCTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: IQWLFAGGRLLVGSS*DREQRQSRFSGPLL Trigger: AAGAAGAGGCCCAGAGAACCGGCTCTGTCTCTGCTCTCTGTCGCACGAGGACCCCACAAGAAGACGGCCACCTGCAAACAGCCATTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 90 bp | CGAACCCAGCAGTCACTCCAACAGGGCTTCTCTGACAGTCCAGGCTaGTGCAGCTCACTGTGGCAAAAGACCTTCCCTGAATCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RTQQSLQQGFSDSPG*CSSLWQKTFPESGP Trigger: AGGACCTGATTCAGGGAAGGTCTTTTGCCACAGTGAGCTGCATCAGCCTGGACTGTCAGAGAAGCCCTGTTGGAGTGACTGCTGGGTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 90 bp | TCAAGAACAAGGATGGCCCAGATACATCGCATGCACACGTCACCGTaGCGACAGCCATGGGCTGAGCACATGAAGGCCTCAGATCCTACA | + |
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Preference number: 5 (lower is better) Translates to: SRTRMAQIHRMHTSP*RQPWAEHMKASDPT Trigger: TGTAGGATCTGAGGCCTTCATGTGCTCAGCCCATGGCTGTCGTCACGGTGACGTGTGCATGCGATGTATCTGGGCCATCCTTGTTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS TCA 90 bp | TGTGCACCGAGGACAAAGGGTCCCTCTAGGGTCATTAATATGGATTaGGGCCCATTGTTTTCTCAAATTAGGCCACAGGGAGCGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CAPRTKGPSRVINMD*GPLFSQIRPQGALL Trigger: AAGAAGCGCTCCCTGTGGCCTAATTTGAGAAAACAATGGGCCTCAATCCATATTAATGACCCTAGAGGGACCCTTTGTCCTCGGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 90 bp | ATGTTCTGGAGAAATAAAAGGATCCCTCTGAGTACCTGCTGGGACTaGGTGAGCATTCTTAACTTACACAGAGGGTCTTGCTGTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: MFWRNKRIPLSTCWD*VSILNLHRGSCCLQ Trigger: TTGCAGACAGCAAGACCCTCTGTGTAAGTTAAGAATGCTCACTCAGTCCCAGCAGGTACTCAGAGGGATCCTTTTATTTCTCCAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | CAGCCCTGGCACCGGCAGGCAACAGACGCTTGCTGGTaGGTGGTCGGGAGCACGTGCCTGGGGAGAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPWHRQATDACW*VVGSTCLGRAA Trigger: GGCAGCTCTCCCCAGGCACGTGCTCCCGACCACCCACCAGCAAGCGTCTGTTGCCTGCCGGTGCCAGGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | CAGACCATTCCCAGGCTGAAGGCTCGGGCTCGGGGGTaGGGCCAGGGCCAGTGGGCTTCCCCAGCTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: QTIPRLKARARG*GQGQWASPAHL Trigger: CAGGTGAGCTGGGGAAGCCCACTGGCCCTGGCCTCACCCCCGAGCCCGAGCCTTCAGCCTGGGAATGGTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | CGCTTCTTGGGGAAGCACATAGCGGGTGAGGGTTCCTaGGGTCCCGCCCAGGGTCCTGCGAGGCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RFLGKHIAGEGS*GPAQGPARPGW Trigger: CCAGCCTGGCCTCGCAGGACCCTGGGCGGGACCCCAGGAACCCTCACCCGCTATGTGCTTCCCCAAGAAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | ACCCAGCCCTGGCACCGGCAGGCAACAGACGCTTGCTaGTGGGTGGTCGGGAGCACGTGCCTGGGGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TQPWHRQATDAC*WVVGSTCLGRA Trigger: AGCTCTCCCCAGGCACGTGCTCCCGACCACCCACCAGCAAGCGTCTGTTGCCTGCCGGTGCCAGGGCTGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | CCGGGAGCCAAGAGGTCCTCACAGGCTGTCACAACCTaGCTGCCTTCCGCTTCCCTCAGGACCTGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: PGAKRSSQAVTT*LPSASLRTCHL Trigger: GAGGTGGCAGGTCCTGAGGGAAGCGGAAGGCAGCCAGGTTGTGACAGCCTGTGAGGACCTCTTGGCTCCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542064.1 |
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| CDS TCA 72 bp | CGCAAGCCTGAATGCAGGTGCCCCTCCTTCAGCTCGTaGCATGCCACATCACCGTGGGACTCACTGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RKPECRCPSFSS*HATSPWDSLPA Trigger: CGCGGGCAGTGAGTCCCACGGTGATGTGGCATGTCACGAGCTGAAGGAGGGGCACCTGCATTCAGGCTTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS GCA 72 bp | GTCACAACCTGGCTGCCTTCCGCTTCCCTCAGGACCTaGCACCTCCAAACCTCTGCCCATGCTGGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VTTWLPSASLRT*HLQTSAHAGSS Trigger: GGAGGACCCAGCATGGGCAGAGGTTTGGAGGTGGCAGGTCCTGAGGGAAGCGGAAGGCAGCCAGGTTGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542064.1 |
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| CDS TCA 72 bp | TCCCTCCAAATTAGGCCAGAGCCCCCGGAGCCCCGCTaGTTACAGCCTGTGCACCGAGGACAAAGGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLQIRPEPPEPR*LQPVHRGQRVP Trigger: AGGGACCCTTTGTCCTCGGTGCACAGGCTGTAATCAGCGGGGCTCCGGGGGCTCTGGCCTAATTTGGAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | TCCCTGGGTTTGTCTCGTCAGCCTTCGCCCACCCCTTaGCCTCGAATGGGCCTCCTGACCCAGAACATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLGLSRQPSPTP*PRMGLLTQNMG Trigger: CCCCATGTTCTGGGTCAGGAGGCCCATTCGAGGTCAAGGGGTGGGCGAAGGCTGACGAGACAAACCCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | GCAACAGACGCTTGCTGGTGGGTGGTCGGGAGCACGTaGCTGGGGAGAGCTGCCTCCACACCATTCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: ATDACWWVVGST*LGRAASTPFTD Trigger: ATCAGTGAATGGTGTGGAGGCAGCTCTCCCCAGGCACGTGCTCCCGACCACCCACCAGCAAGCGTCTGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | CCCATCTCTGACGTGGACCCCGCATACAGGGGGTCGTaGGCCTGTCAGATTGGGTCACCCGAATCAAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PISDVDPAYRGS*ACQIGSPESRV Trigger: CACCCTTGATTCGGGTGACCCAATCTGACAGGCCCACGACCCCCTGTATGCGGGGTCCACGTCAGAGATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 72 bp | GTCCCTGGGTTTGTCTCGTCAGCCTTCGCCCACCCCTaGACCTCGAATGGGCCTCCTGACCCAGAACATGGG | + |
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Preference number: 6 (lower is better) Translates to: VPGFVSSAFAHP*TSNGPPDPEHG Trigger: CCCATGTTCTGGGTCAGGAGGCCCATTCGAGGTCAAGGGGTGGGCGAAGGCTGACGAGACAAACCCAGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | GAGCCAAGAGGTCCTCACAGGCTGTCACAACCTGGCTaGCTTCCGCTTCCCTCAGGACCTGCCACCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: EPRGPHRLSQPG*LPLPSGPATSK Trigger: TTTGGAGGTGGCAGGTCCTGAGGGAAGCGGAAGGCAGCCAGGTTGTGACAGCCTGTGAGGACCTCTTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542064.1 |
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| CDS TCA 72 bp | ACACGTCACCGTGACGACAGCCATGGGCTGAGCACATaGAGGCCTCAGATCCTACAGGAGGTTGCCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TRHRDDSHGLST*RPQILQEVALC Trigger: GCAGAGGGCAACCTCCTGTAGGATCTGAGGCCTTCATGTGCTCAGCCCATGGCTGTCGTCACGGTGACGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS CCA 72 bp | TCTGCCTCTTCTCATCTGACGCCTAGCCCAGTAGCCTaGGGCTTCGCTGGGTCCTGGACGCTTGTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: SASSHLTPSPVA*GFAGSWTLVHM Trigger: CATGTGAACAAGCGTCCAGGACCCAGCGAAGCCCCAGGCTACTGGGCTAGGCGTCAGATGAGAAGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS CAA 90 bp | AGGCTGGAACTCCACGACCAAGTCACTGGCAGATTCAATGGCTGTTaGCAGGTGGCCGTCTTCTTGTGGGGTCCTCGTGCGACAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RLELHDQVTGRFNGC*QVAVFLWGPRATES Trigger: GCTCTCTGTCGCACGAGGACCCCACAAGAAGACGGCCACCTGCAAACAGCCATTGAATCTGCCAGTGACTTGGTCGTGGAGTTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | TCGCATGCACACGTCACCGTGACGACAGCCATGGGCTaGGCACATGAAGGCCTCAGATCCTACAGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SHAHVTVTTAMG*AHEGLRSYRRL Trigger: CAACCTCCTGTAGGATCTGAGGCCTTCATGTGCTCAGCCCATGGCTGTCGTCACGGTGACGTGTGCATGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS GCA 72 bp | CTCAAATGGTGCAACGAGGATGCCACGGCCCTAACCTaGAAACACGTTTCCACGACTTCACGCCGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LKWCNEDATALT*KHVSTTSRRRQ Trigger: CTGCCTCCGGCGTGAAGTCGTGGAAACGTGTTTGCAGGTTAGGGCCGTGGCATCCTCGTTGCACCATTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | TGGCACCCCATAGGCGCTCAAATGGTGCAACGAGGATaGCACGGCCCTAACCTGCAAACACGTTTCCACGAC | + |
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Preference number: 6 (lower is better) Translates to: WHPIGAQMVQRG*HGPNLQTRFHD Trigger: GTCGTGGAAACGTGTTTGCAGGTTAGGGCCGTGGCATCCTCGTTGCACCATTTGAGCGCCTATGGGGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | ACGCCTAGCCCAGTAGCCTGGGGCTTCGCTGGGTCCTaGACGCTTGTTCACATGCTCACCACACTTTACAGT | + |
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Preference number: 6 (lower is better) Translates to: TPSPVAWGFAGS*TLVHMLTTLYS Trigger: ACTGTAAAGTGTGGTGAGCATGTGAACAAGCGTCCAGGACCCAGCGAAGCCCCAGGCTACTGGGCTAGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS CAA 72 bp | CTCCACGACCAAGTCACTGGCAGATTCAATGGCTGTTaGCAGGTGGCCGTCTTCTTGTGGGGTCCTCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LHDQVTGRFNGC*QVAVFLWGPRA Trigger: CGCACGAGGACCCCACAAGAAGACGGCCACCTGCAAACAGCCATTGAATCTGCCAGTGACTTGGTCGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | GGTGAGGCCAGGGCCAGTGGGCTTCCCCAGCTCACCTaGAGAATGTTCTGGAGAAATAAAAGGATCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GEARASGLPQLT*RMFWRNKRIPL Trigger: CAGAGGGATCCTTTTATTTCTCCAGAACATTCTGCAGGTGAGCTGGGGAAGCCCACTGGCCCTGGCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CCA 72 bp | AAAGTGAGGCTCCGAAAGGTCCAAAGGCTGTCTCGCTaGTTCGCAAGCCTGAATGCAGGTGCCCCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KVRLRKVQRLSR*FASLNAGAPPS Trigger: TGAAGGAGGGGCACCTGCATTCAGGCTTGCGAACCAGCGAGACAGCCTTTGGACCTTTCGGAGCCTCACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS TCA 72 bp | AGGCTGATGCAGCTCACTGTGGCAAAAGACCTTCCCTaGATCAGGTCCTCACATAGAGGCCCATGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RLMQLTVAKDLP*IRSSHRGPCSP Trigger: AGGGCTGCATGGGCCTCTATGTGAGGACCTGATTCAGGGAAGGTCTTTTGCCACAGTGAGCTGCATCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | TCAGCTCGTGACATGCCACATCACCGTGGGACTCACTaGCCGCGTTCAAGAACAAGGATGGCCCAGATACAT | + |
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Preference number: 6 (lower is better) Translates to: SARDMPHHRGTH*PRSRTRMAQIH Trigger: ATGTATCTGGGCCATCCTTGTTCTTGAACGCGGGCAGTGAGTCCCACGGTGATGTGGCATGTCACGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS CCA 72 bp | ACCAAGTCACTGGCAGATTCAATGGCTGTTTGCAGGTaGCCGTCTTCTTGTGGGGTCCTCGTGCGACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TKSLADSMAVCR*PSSCGVLVRQR Trigger: TCTCTGTCGCACGAGGACCCCACAAGAAGACGGCCACCTGCAAACAGCCATTGAATCTGCCAGTGACTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 72 bp | CCTGACCCAGAACATGGGGATCGGGGCCTGGGAAGGTaGAGGGAAGCATTAAATGAGGTGGCCCTTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PDPEHGDRGLGR*REALNEVALCH Trigger: ATGACAAAGGGCCACCTCATTTAATGCTTCCCTCAACCTTCCCAGGCCCCGATCCCCATGTTCTGGGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | CAGTCACTCCAACAGGGCTTCTCTGACAGTCCAGGCTaGTGCAGCTCACTGTGGCAAAAGACCTTCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: QSLQQGFSDSPG*CSSLWQKTFPE Trigger: TTCAGGGAAGGTCTTTTGCCACAGTGAGCTGCATCAGCCTGGACTGTCAGAGAAGCCCTGTTGGAGTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | GGATCGGGGCCTGGGAAGGTTGAGGGAAGCATTAAATaGGGTGGCCCTTTGTCATGTATCTGGCACCCCATA | + |
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Preference number: 6 (lower is better) Translates to: GSGPGKVEGSIK*GGPLSCIWHPI Trigger: TATGGGGTGCCAGATACATGACAAAGGGCCACCTCATTTAATGCTTCCCTCAACCTTCCCAGGCCCCGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | CTTGGGAATTCCACTCCAATTCTTAGTGTGGGAAAGTaGGGCTCCGAAAGGTCCAAAGGCTGTCTCGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGNSTPILSVGK*GSERSKGCLAG Trigger: ACCAGCGAGACAGCCTTTGGACCTTTCGGAGCCTCACTTTCCCACACTAAGAATTGGAGTGGAATTCCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | CCTGGGGCTTCGCTGGGTCCTGGACGCTTGTTCACATaGTCACCACACTTTACAGTTTATCGTGTAACATTG | + |
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Preference number: 6 (lower is better) Translates to: PGASLGPGRLFT*SPHFTVYRVTL Trigger: CAATGTTACACGATAAACTGTAAAGTGTGGTGAGCATGTGAACAAGCGTCCAGGACCCAGCGAAGCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542064.1 ENST00000645449.1 |
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| CDS GCA 72 bp | GGGTCTTGCTGTCTGCAAAGCGTTTTAGATTCTCAATaGCTTTCAACCTCCAGCACCTTGGGAATTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: GSCCLQSVLDSQ*LSTSSTLGIPL Trigger: GAGTGGAATTCCCAAGGTGCTGGAGGTTGAAAGGCATTGAGAATCTAAAACGCTTTGCAGACAGCAAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 90 bp | CTGCAAAGCGTTTTAGATTCTCAATGCCTTTCAACCTCCAGCACCTaGGGAATTCCACTCCAATTCTTAGTGTGGGAAAGTGAGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LQSVLDSQCLSTSST*GIPLQFLVWESEAP Trigger: CGGAGCCTCACTTTCCCACACTAAGAATTGGAGTGGAATTCCCAAGGTGCTGGAGGTTGAAAGGCATTGAGAATCTAAAACGCTTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 90 bp | GGACTCAACTACATTCCACAGGTCCCCTCTCCTAATGCCATCACATaGGGAGTTAAGGCTTCAACATATGTATTTAGGGAGGACGCACAC | + |
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Preference number: 6 (lower is better) Translates to: GLNYIPQVPSPNAIT*GVKASTYVFREDAH Trigger: GTGTGCGTCCTCCCTAAATACATATGTTGAAGCCTTAACTCCCAATGTGATGGCATTAGGAGAGGGGACCTGTGGAATGTAGTTGAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS TCA 72 bp | AGAAATAAAAGGATCCCTCTGAGTACCTGCTGGGACTaGGTGAGCATTCTTAACTTACACAGAGGGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RNKRIPLSTCWD*VSILNLHRGSC Trigger: GCAAGACCCTCTGTGTAAGTTAAGAATGCTCACTCAGTCCCAGCAGGTACTCAGAGGGATCCTTTTATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 72 bp | TACATTCCACAGGTCCCCTCTCCTAATGCCATCACATaGGGAGTTAAGGCTTCAACATATGTATTTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: YIPQVPSPNAIT*GVKASTYVFRE Trigger: CTCCCTAAATACATATGTTGAAGCCTTAACTCCCAATGTGATGGCATTAGGAGAGGGGACCTGTGGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS GCA 72 bp | CGTCAGTTCAGACTGCCAACACAACACCACAGACTGTaGGGTTTAAATCGCAAACATTTATTTCTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: RQFRLPTQHHRL*GLNRKHLFLTV Trigger: AACTGTGAGAAATAAATGTTTGCGATTTAAACCGCACAGTCTGTGGTGTTGTGTTGGCAGTCTGAACTGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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| CDS CAA 72 bp | GTTTTAGATTCTCAATGCCTTTCAACCTCCAGCACCTaGGGAATTCCACTCCAATTCTTAGTGTGGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VLDSQCLSTSST*GIPLQFLVWES Trigger: ACTTTCCCACACTAAGAATTGGAGTGGAATTCCCAAGGTGCTGGAGGTTGAAAGGCATTGAGAATCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645449.1 |
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