Pregenerated sensors for LINC02745 (Homo sapiens)
Ensembl gene IDs: ENSG00000255300Ensembl transcript IDs: ENST00000534059.1, ENST00000663570.1, ENST00000667585.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTAAATCTGCAAACCAGGGAGAGAGGCTTCGGGAGAAACCAGACCTaGCAACACCTTGAGCTTGTAGCCTCCAGAGATGTGAGAAAATTA | + |
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Preference number: 5 (lower is better) Translates to: VNLQTRERGFGRNQT*QHLELVASRDVRKL Trigger: TAATTTTCTCACATCTCTGGAGGCTACAAGCTCAAGGTGTTGGCAGGTCTGGTTTCTCCCGAAGCCTCTCTCCCTGGTTTGCAGATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS GCA 90 bp | TGTCAGGAGCCAGATCTGGTGATAGGAGGACAAGTAAGCAAGTGTTaGAATGATCAGATAAGAGGTGATGGTGACCTGCTTTCTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CQEPDLVIGGQVSKC*NDQIRGDGDLLSEL Trigger: AAGCTCAGAAAGCAGGTCACCATCACCTCTTATCTGATCATTGCAACACTTGCTTACTTGTCCTCCTATCACCAGATCTGGCTCCTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CCA 90 bp | GAGCTTCTAACTCACGTGTCTATCTGGTTCCTGGACATCCTCATTTaGAAATTTTATAATTCAACTCAAAGTCAGCCCTGTCATGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: ELLTHVSIWFLDILI*KFYNSTQSQPCHVC Trigger: ACAGACATGACAGGGCTGACTTTGAGTTGAATTATAAAATTTCCAAATGAGGATGTCCAGGAACCAGATAGACACGTGAGTTAGAAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CCA 90 bp | GGTGATGGTGACCTGCTTTCTGAGCTTCTAACTCACGTGTCTATCTaGTTCCTGGACATCCTCATTTGGAAATTTTATAATTCAACTCAA | + |
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Preference number: 5 (lower is better) Translates to: GDGDLLSELLTHVSI*FLDILIWKFYNSTQ Trigger: TTGAGTTGAATTATAAAATTTCCAAATGAGGATGTCCAGGAACCAGATAGACACGTGAGTTAGAAGCTCAGAAAGCAGGTCACCATCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CCA 90 bp | TACTACAATGTCAACAACTGGCCTGTAAATAGTTCTGCATGGATGTaGAGACCTCAGGAAACTTACAATCATGTCCTTTTTCACATGGCA | + |
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Preference number: 5 (lower is better) Translates to: YYNVNNWPVNSSAWM*RPQETYNHVLFHMA Trigger: TGCCATGTGAAAAAGGACATGATTGTAAGTTTCCTGAGGTCTCCACATCCATGCAGAACTATTTACAGGCCAGTTGTTGACATTGTAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667585.1 |
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| CDS TCA 90 bp | CTTATTTTTCTCCCTCATTCAGAACATGTCTATCACTATTTTGGCTaGCAGAGTAGCTTCGATATAGAACATTTCTCATCTCGTAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LIFLPHSEHVYHYFG*QSSFDIEHFSSRRR Trigger: TCTTCTACGAGATGAGAAATGTTCTATATCGAAGCTACTCTGTCAGCCAAAATAGTGATAGACATGTTCTGAATGAGGGAGAAAAATAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS GCA 90 bp | GTTTCTTCCCTTATTCTATTCCCAAGATTTGTCATGCATTTCCTTTaGCACAGTCTAACGCCCCTTCAAATTTATCCAAAATTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: VSSLILFPRFVMHFL*HSLTPLQIYPKFHF Trigger: AAAATGAAATTTTGGATAAATTTGAAGGGGCGTTAGACTGTGGCAAAGGAAATGCATGACAAATCTTGGGAATAGAATAAGGGAAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS GCA 72 bp | CAAACCAGGGAGAGAGGCTTCGGGAGAAACCAGACCTaGCAACACCTTGAGCTTGTAGCCTCCAGAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: QTRERGFGRNQT*QHLELVASRDV Trigger: CACATCTCTGGAGGCTACAAGCTCAAGGTGTTGGCAGGTCTGGTTTCTCCCGAAGCCTCTCTCCCTGGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS GCA 72 bp | CCAGATCTGGTGATAGGAGGACAAGTAAGCAAGTGTTaGAATGATCAGATAAGAGGTGATGGTGACCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PDLVIGGQVSKC*NDQIRGDGDLL Trigger: AAGCAGGTCACCATCACCTCTTATCTGATCATTGCAACACTTGCTTACTTGTCCTCCTATCACCAGATCTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CAA 72 bp | TATAAGGTTTTTATCCCTCTCATTACGCAAGGTGAATaGTCAGGAGCCAGATCTGGTGATAGGAGGACAAGT | + |
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Preference number: 6 (lower is better) Translates to: YKVFIPLITQGE*SGARSGDRRTS Trigger: ACTTGTCCTCCTATCACCAGATCTGGCTCCTGACAATTCACCTTGCGTAATGAGAGGGATAAAAACCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CCA 72 bp | GTCAACAACTGGCCTGTAAATAGTTCTGCATGGATGTaGAGACCTCAGGAAACTTACAATCATGTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VNNWPVNSSAWM*RPQETYNHVLF Trigger: AAAAAGGACATGATTGTAAGTTTCCTGAGGTCTCCACATCCATGCAGAACTATTTACAGGCCAGTTGTTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667585.1 |
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| CDS CAA 72 bp | TACAAAGCTCTTCCAGGAAATTTCACTCAGATTTTATaGGCCAGAGCAGGTTACAAGAGCATGCCAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: YKALPGNFTQIL*ARAGYKSMPSF Trigger: GAAACTTGGCATGCTCTTGTAACCTGCTCTGGCCAATAAAATCTGAGTGAAATTTCCTGGAAGAGCTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS CAA 72 bp | AATCTCTGTTGTTTAAGCCACACAGTCCATGGCATTTaGTTATGGCAGCCCGAGCAAACTTTTCAATCATTG | + |
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Preference number: 6 (lower is better) Translates to: NLCCLSHTVHGI*LWQPEQTFQSL Trigger: CAATGATTGAAAAGTTTGCTCGGGCTGCCATAACAAAATGCCATGGACTGTGTGGCTTAAACAACAGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS CAA 90 bp | GAGAAAATTAATCTCTGTTGTTTAAGCCACACAGTCCATGGCATTTaGTTATGGCAGCCCGAGCAAACTTTTCAATCATTGATATTCGCC | + |
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Preference number: 6 (lower is better) Translates to: EKINLCCLSHTVHGI*LWQPEQTFQSLIFA Trigger: GGCGAATATCAATGATTGAAAAGTTTGCTCGGGCTGCCATAACAAAATGCCATGGACTGTGTGGCTTAAACAACAGAGATTAATTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS CCA 72 bp | GACCTGCTTTCTGAGCTTCTAACTCACGTGTCTATCTaGTTCCTGGACATCCTCATTTGGAAATTTTATAAT | + |
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Preference number: 6 (lower is better) Translates to: DLLSELLTHVSI*FLDILIWKFYN Trigger: ATTATAAAATTTCCAAATGAGGATGTCCAGGAACCAGATAGACACGTGAGTTAGAAGCTCAGAAAGCAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534059.1 |
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| CDS CCA 72 bp | TGTTGTTTAAGCCACACAGTCCATGGCATTTTGTTATaGCAGCCCGAGCAAACTTTTCAATCATTGATATTC | + |
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Preference number: 6 (lower is better) Translates to: CCLSHTVHGILL*QPEQTFQSLIF Trigger: GAATATCAATGATTGAAAAGTTTGCTCGGGCTGCCATAACAAAATGCCATGGACTGTGTGGCTTAAACAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS TCA 72 bp | CTCCCTCATTCAGAACATGTCTATCACTATTTTGGCTaGCAGAGTAGCTTCGATATAGAACATTTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LPHSEHVYHYFG*QSSFDIEHFSS Trigger: AGATGAGAAATGTTCTATATCGAAGCTACTCTGTCAGCCAAAATAGTGATAGACATGTTCTGAATGAGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS CAA 72 bp | CCTTATTCTATTCCCAAGATTTGTCATGCATTTCCTTaGCCACAGTCTAACGCCCCTTCAAATTTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PYSIPKICHAFP*PQSNAPSNLSK Trigger: TTTGGATAAATTTGAAGGGGCGTTAGACTGTGGCAAAGGAAATGCATGACAAATCTTGGGAATAGAATAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS GCA 72 bp | CTTATTCTATTCCCAAGATTTGTCATGCATTTCCTTTaGCACAGTCTAACGCCCCTTCAAATTTATCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LILFPRFVMHFL*HSLTPLQIYPK Trigger: TTTTGGATAAATTTGAAGGGGCGTTAGACTGTGGCAAAGGAAATGCATGACAAATCTTGGGAATAGAATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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| CDS CAA 90 bp | AGTTTCTTCCCTTATTCTATTCCCAAGATTTGTCATGCATTTCCTTaGCCACAGTCTAACGCCCCTTCAAATTTATCCAAAATTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SFFPYSIPKICHAFP*PQSNAPSNLSKISF Trigger: AAATGAAATTTTGGATAAATTTGAAGGGGCGTTAGACTGTGGCAAAGGAAATGCATGACAAATCTTGGGAATAGAATAAGGGAAGAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663570.1 |
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