Pregenerated sensors for LINC02744 (Homo sapiens)
Ensembl gene IDs: ENSG00000254863Ensembl transcript IDs: ENST00000524708.1, ENST00000526934.1, ENST00000534055.2, ENST00000662076.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTCCTGACCCCACTAGAGTCACTGTTTCCCTTGCCTGGCATTTCTaGCCAGACATCGGCCAGTCCCGAGTCCACTTTGCTGCACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SPDPTRVTVSLAWHF*PDIGQSRVHFAAPH Trigger: GTGGGGTGCAGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAGGCAAGGGAAACAGTGACTCTAGTGGGGTCAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 90 bp | CTCCAGCAGCTCAGCCCCAGATCGCAGCAGCTAATCTGCATCCGGTaGATCAAAATAGCCTCCAAACCAGATGGAGGCCCAGGCCACACC | + |
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Preference number: 5 (lower is better) Translates to: LQQLSPRSQQLICIR*IKIASKPDGGPGHT Trigger: GGTGTGGCCTGGGCCTCCATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAGATTAGCTGCTGCGATCTGGGGCTGAGCTGCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS CCA 90 bp | AGATGCCCCTCTCCTGACCCCACTAGAGTCACTGTTTCCCTTGCCTaGCATTTCTGGCCAGACATCGGCCAGTCCCGAGTCCACTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RCPSPDPTRVTVSLA*HFWPDIGQSRVHFA Trigger: AGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAGGCAAGGGAAACAGTGACTCTAGTGGGGTCAGGAGAGGGGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS TCA 90 bp | ACAGGGGCTTGTAGAGTCCAGGGAGGAGGAGGCAGCTTCGTCAGATaGGATCAGCATGAAAGGCTGTGGGAGGGAGGTGGAAAGAGAACG | + |
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Preference number: 5 (lower is better) Translates to: TGACRVQGGGGSFVR*DQHERLWEGGGKRT Trigger: CGTTCTCTTTCCACCTCCCTCCCACAGCCTTTCATGCTGATCTCATCTGACGAAGCTGCCTCCTCCTCCCTGGACTCTACAAGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 90 bp | GCAGCTAATCTGCATCCGGTGGATCAAAATAGCCTCCAAACCAGATaGAGGCCCAGGCCACACCAGGAAACCAGAACCGGTCCTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: AANLHPVDQNSLQTR*RPRPHQETRTGPEC Trigger: GCACTCAGGACCGGTTCTGGTTTCCTGGTGTGGCCTGGGCCTCCATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAGATTAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS GCA 90 bp | AAGGCATCTCTCCAGCAGCTCAGCCCCAGATCGCAGCAGCTAATCTaGATCCGGTGGATCAAAATAGCCTCCAAACCAGATGGAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: KASLQQLSPRSQQLI*IRWIKIASKPDGGP Trigger: TGGGCCTCCATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAGATTAGCTGCTGCGATCTGGGGCTGAGCTGCTGGAGAGATGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS GCA 90 bp | TGCCTGGCATTTCTGGCCAGACATCGGCCAGTCCCGAGTCCACTTTaGTGCACCCCACACTTGATGCAAACAAGAGCCTGTTTGAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: CLAFLARHRPVPSPL*CTPHLMQTRACLKQ Trigger: TTGCTTCAAACAGGCTCTTGTTTGCATCAAGTGTGGGGTGCAGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 90 bp | TCCCTTCTCCTTTTCTCAATCCGATCCCATCTTTACTCATCTGAATaGTTGTCAGCTCCTGGAAACTCTTCCCGGGGCAGCCGCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SLLLFSIRSHLYSSE*LSAPGNSSRGSRST Trigger: GGTGCTGCGGCTGCCCCGGGAAGAGTTTCCAGGAGCTGACAAGCATTCAGATGAGTAAAGATGGGATCGGATTGAGAAAAGGAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000526934.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 90 bp | CTGGCATTTCTGGCCAGACATCGGCCAGTCCCGAGTCCACTTTGCTaGACCCCACACTTGATGCAAACAAGAGCCTGTTTGAAGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: LAFLARHRPVPSPLC*TPHLMQTRACLKQK Trigger: TTTTTGCTTCAAACAGGCTCTTGTTTGCATCAAGTGTGGGGTGCAGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 90 bp | TGTTTGAATTCTGTTTCTGCCATTGTCCAGCAAACTTGGACCTCCTaGCTCAGAGTCGCCTCACCTATAAGGGGGACAATGAAGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: CLNSVSAIVQQTWTS*LRVASPIRGTMKSL Trigger: GAGGGACTTCATTGTCCCCCTTATAGGTGAGGCGACTCTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 90 bp | GAGACCAGAACTTCTCCTAGAAGACAGGTGTTTGAATTCTGTTTCTaGCATTGTCCAGCAAACTTGGACCTCCTGCCTCAGAGTCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ETRTSPRRQVFEFCF*HCPANLDLLPQSRL Trigger: GAGGCGACTCTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACACCTGTCTTCTAGGAGAAGTTCTGGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 90 bp | AGTTTGGAGCTTGGGATTTTAGGAGTTTTGGAGTGGGCCGAAGTGTaGAGATTGTTGATTGGTCGAGGAGTCCAGGGTGAAGTTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SLELGILGVLEWAEV*RLLIGRGVQGEVLG Trigger: TCCCAGAACTTCACCCTGGACTCCTCGACCAATCAACAATCTCCACACTTCGGCCCACTCCAAAACTCCTAAAATCCCAAGCTCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 90 bp | ATCAGCATGAAAGGCTGTGGGAGGGAGGTGGAAAGAGAACGAATATaGTCTCCCTTCTCCTTTTCTCAATCCGATCCCATCTTTACTCAT | + |
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Preference number: 5 (lower is better) Translates to: ISMKGCGREVERERI*SPFSFSQSDPIFTH Trigger: ATGAGTAAAGATGGGATCGGATTGAGAAAAGGAGAAGGGAGAGCATATTCGTTCTCTTTCCACCTCCCTCCCACAGCCTTTCATGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 90 bp | CCGCAGCACCGAGGAGAGACCAGAACTTCTCCTGTAGAAATAGGATaGAGAGTGCTGGGAACGGAAAGAGGAATTTATTTATTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PQHRGETRTSPVEIG*RVLGTERGIYLFVL Trigger: GAGAACAAATAAATAAATTCCTCTTTCCGTTCCCAGCACTCTCCATCCTATTTCTACAGGAGAAGTTCTGGTCTCTCCTCGGTGCTGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS TCA 90 bp | GGTGAAGTTCTGGGACAGGGAGATGAAGAAACTGTGTTCTCATACTaGTTCCATTCCTCTGTGGGGGTCTTCAAACTTGTTAGTATCATC | + |
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Preference number: 5 (lower is better) Translates to: GEVLGQGDEETVFSY*FHSSVGVFKLVSII Trigger: GATGATACTAACAAGTTTGAAGACCCCCACAGAGGAATGGAATCAGTATGAGAACACAGTTTCTTCATCTCCCTGTCCCAGAACTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 90 bp | AGGGAGATGAAGAAACTGTGTTCTCATACTGATTCCATTCCTCTGTaGGGGTCTTCAAACTTGTTAGTATCATCTGTTTCGCTGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: REMKKLCSHTDSIPL*GSSNLLVSSVSLEF Trigger: GAATTCCAGCGAAACAGATGATACTAACAAGTTTGAAGACCCCCACAGAGGAATGGAATCAGTATGAGAACACAGTTTCTTCATCTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 72 bp | GTCGCCTCACCTATAAGGGGGACAATGAAGTCCCTCTaGCTTGCGCTCCTGGGCCAGCAGATGCCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VASPIRGTMKSL*LALLGQQMPLS Trigger: GGAGAGGGGCATCTGCTGGCCCAGGAGCGCAAGGCAGAGGGACTTCATTGTCCCCCTTATAGGTGAGGCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 72 bp | CCCACTAGAGTCACTGTTTCCCTTGCCTGGCATTTCTaGCCAGACATCGGCCAGTCCCGAGTCCACTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PTRVTVSLAWHF*PDIGQSRVHFA Trigger: AGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAGGCAAGGGAAACAGTGACTCTAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 72 bp | CTGCATCCGGTGGATCAAAATAGCCTCCAAACCAGATaGAGGCCCAGGCCACACCAGGAAACCAGAACCGGT | + |
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Preference number: 6 (lower is better) Translates to: LHPVDQNSLQTR*RPRPHQETRTG Trigger: ACCGGTTCTGGTTTCCTGGTGTGGCCTGGGCCTCCATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS CCA 72 bp | CTCAGCCCCAGATCGCAGCAGCTAATCTGCATCCGGTaGATCAAAATAGCCTCCAAACCAGATGGAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPRSQQLICIR*IKIASKPDGGP Trigger: TGGGCCTCCATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAGATTAGCTGCTGCGATCTGGGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS CAA 90 bp | TTGCCTGGCATTTCTGGCCAGACATCGGCCAGTCCCGAGTCCACTTaGCTGCACCCCACACTTGATGCAAACAAGAGCCTGTTTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LPGISGQTSASPEST*LHPTLDANKSLFEA Trigger: TGCTTCAAACAGGCTCTTGTTTGCATCAAGTGTGGGGTGCAGCAAAGTGGACTCGGGACTGGCCGATGTCTGGCCAGAAATGCCAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 72 bp | CTCCAGCAGCTCAGCCCCAGATCGCAGCAGCTAATCTaGATCCGGTGGATCAAAATAGCCTCCAAACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LQQLSPRSQQLI*IRWIKIASKPD Trigger: ATCTGGTTTGGAGGCTATTTTGATCCACCGGATGCAGATTAGCTGCTGCGATCTGGGGCTGAGCTGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526934.1 |
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| CDS CAA 90 bp | CTTCTCCTTTTCTCAATCCGATCCCATCTTTACTCATCTGAATGCTaGTCAGCTCCTGGAAACTCTTCCCGGGGCAGCCGCAGCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLFSIRSHLYSSEC*SAPGNSSRGSRSTE Trigger: CTCGGTGCTGCGGCTGCCCCGGGAAGAGTTTCCAGGAGCTGACAAGCATTCAGATGAGTAAAGATGGGATCGGATTGAGAAAAGGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000526934.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS TCA 72 bp | TCCTTCAGCAATTACCTCTCCCTCGGGGTTCTGGGATaGGATCTACAAAGACTGAGGGGTCGAGGGCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSNYLSLGVLG*DLQRLRGRGLR Trigger: TCTTAGCCCTCGACCCCTCAGTCTTTGTAGATCTCATCCCAGAACCCCGAGGGAGAGGTAATTGCTGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 72 bp | TCTGTTTCTGCCATTGTCCAGCAAACTTGGACCTCCTaGCTCAGAGTCGCCTCACCTATAAGGGGGACAATG | + |
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Preference number: 6 (lower is better) Translates to: SVSAIVQQTWTS*LRVASPIRGTM Trigger: CATTGTCCCCCTTATAGGTGAGGCGACTCTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 72 bp | TTCTCAATCCGATCCCATCTTTACTCATCTGAATGCTaGTCAGCTCCTGGAAACTCTTCCCGGGGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: FSIRSHLYSSEC*SAPGNSSRGSR Trigger: GCGGCTGCCCCGGGAAGAGTTTCCAGGAGCTGACAAGCATTCAGATGAGTAAAGATGGGATCGGATTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000526934.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 72 bp | ACGGGAGGAAGCCTCAAATCCATCTCCCAGAGGAGTTaGGAGCTTGGGATTTTAGGAGTTTTGGAGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TGGSLKSISQRS*ELGILGVLEWA Trigger: GGCCCACTCCAAAACTCCTAAAATCCCAAGCTCCAAACTCCTCTGGGAGATGGATTTGAGGCTTCCTCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 90 bp | CACAAGGAAACGGGAGGAAGCCTCAAATCCATCTCCCAGAGGAGTTaGGAGCTTGGGATTTTAGGAGTTTTGGAGTGGGCCGAAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: HKETGGSLKSISQRS*ELGILGVLEWAEVW Trigger: CCACACTTCGGCCCACTCCAAAACTCCTAAAATCCCAAGCTCCAAACTCCTCTGGGAGATGGATTTGAGGCTTCCTCCCGTTTCCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 90 bp | CGCAGCACCGAGGAGAGACCAGAACTTCTCCTAGAAGACAGGTGTTaGAATTCTGTTTCTGCCATTGTCCAGCAAACTTGGACCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSTEERPELLLEDRC*NSVSAIVQQTWTSC Trigger: GCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACACCTGTCTTCTAGGAGAAGTTCTGGTCTCTCCTCGGTGCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 90 bp | CTTGGGATTTTAGGAGTTTTGGAGTGGGCCGAAGTGTGGAGATTGTaGATTGGTCGAGGAGTCCAGGGTGAAGTTCTGGGACAGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LGILGVLEWAEVWRL*IGRGVQGEVLGQGD Trigger: ATCTCCCTGTCCCAGAACTTCACCCTGGACTCCTCGACCAATCAACAATCTCCACACTTCGGCCCACTCCAAAACTCCTAAAATCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 72 bp | TTAGGAGTTTTGGAGTGGGCCGAAGTGTGGAGATTGTaGATTGGTCGAGGAGTCCAGGGTGAAGTTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LGVLEWAEVWRL*IGRGVQGEVLG Trigger: TCCCAGAACTTCACCCTGGACTCCTCGACCAATCAACAATCTCCACACTTCGGCCCACTCCAAAACTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 90 bp | AAATCCATCTCCCAGAGGAGTTTGGAGCTTGGGATTTTAGGAGTTTaGGAGTGGGCCGAAGTGTGGAGATTGTTGATTGGTCGAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: KSISQRSLELGILGV*EWAEVWRLLIGRGV Trigger: GACTCCTCGACCAATCAACAATCTCCACACTTCGGCCCACTCCAAAACTCCTAAAATCCCAAGCTCCAAACTCCTCTGGGAGATGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 72 bp | TGTTTGAATTCTGTTTCTGCCATTGTCCAGCAAACTTaGACCTCCTGCCTCAGAGTCGCCTCACCTATAAGG | + |
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Preference number: 6 (lower is better) Translates to: CLNSVSAIVQQT*TSCLRVASPIR Trigger: CCTTATAGGTGAGGCGACTCTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 72 bp | GTGTTTGAATTCTGTTTCTGCCATTGTCCAGCAAACTaGGACCTCCTGCCTCAGAGTCGCCTCACCTATAAG | + |
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Preference number: 6 (lower is better) Translates to: VFEFCFCHCPAN*DLLPQSRLTYK Trigger: CTTATAGGTGAGGCGACTCTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CAA 72 bp | TCCCAGAGGAGTTTGGAGCTTGGGATTTTAGGAGTTTaGGAGTGGGCCGAAGTGTGGAGATTGTTGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SQRSLELGILGV*EWAEVWRLLIG Trigger: ACCAATCAACAATCTCCACACTTCGGCCCACTCCAAAACTCCTAAAATCCCAAGCTCCAAACTCCTCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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| CDS GCA 72 bp | ACTTCTCCTAGAAGACAGGTGTTTGAATTCTGTTTCTaGCATTGTCCAGCAAACTTGGACCTCCTGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TSPRRQVFEFCF*HCPANLDLLPQ Trigger: CTGAGGCAGGAGGTCCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACACCTGTCTTCTAGGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 72 bp | AATAACAGAATCCATCCTTTACTGCTAGATCAAGGCTaGCCACCCACTGTGGACAACATTGCCACTGACCAT | + |
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Preference number: 6 (lower is better) Translates to: NNRIHPLLLDQG*PPTVDNIATDH Trigger: ATGGTCAGTGGCAATGTTGTCCACAGTGGGTGGCCAGCCTTGATCTAGCAGTAAAGGATGGATTCTGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662076.1 |
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| CDS CAA 72 bp | GAGGAGAGACCAGAACTTCTCCTAGAAGACAGGTGTTaGAATTCTGTTTCTGCCATTGTCCAGCAAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: EERPELLLEDRC*NSVSAIVQQTW Trigger: CCAAGTTTGCTGGACAATGGCAGAAACAGAATTCAAACACCTGTCTTCTAGGAGAAGTTCTGGTCTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524708.1 ENST00000534055.2 ENST00000662076.1 |
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| CDS CCA 72 bp | AAGAAACTGTGTTCTCATACTGATTCCATTCCTCTGTaGGGGTCTTCAAACTTGTTAGTATCATCTGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: KKLCSHTDSIPL*GSSNLLVSSVS Trigger: CGAAACAGATGATACTAACAAGTTTGAAGACCCCCACAGAGGAATGGAATCAGTATGAGAACACAGTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534055.2 ENST00000662076.1 |
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