Pregenerated sensors for LINC02743 (Homo sapiens)
Ensembl gene IDs: ENSG00000255258Ensembl transcript IDs: ENST00000526254.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGTGCTGGGCTCCTGTCACTCTCCCAGTACCTGCGAGGAGAGTGTaGGCCCTGCGAACCACTGCCCCACATGCATCCCTCTCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCWAPVTLPVPARRV*ALRTTAPHASLSDD Trigger: GTCATCTGAGAGGGATGCATGTGGGGCAGTGGTTCGCAGGGCCCACACTCTCCTCGCAGGTACTGGGAGAGTGACAGGAGCCCAGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 90 bp | TCCAGCCTGGGGGTGACACTCCAGAGGAGCGCAGCTCAGGGATTCTaGGAACAGAAGCTGCTCCCCTTGTCCTCAGGGAGCTCCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLGVTLQRSAAQGF*EQKLLPLSSGSSRN Trigger: GTTTCTGGAGCTCCCTGAGGACAAGGGGAGCAGCTTCTGTTCTCAGAATCCCTGAGCTGCGCTCCTCTGGAGTGTCACCCCCAGGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CCA 90 bp | GTAGTCTCTAGTCCAGACTCTGAGAGCCTTCTCTATGCCAGGTGCTaGGCTCCTGTCACTCTCCCAGTACCTGCGAGGAGAGTGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSSPDSESLLYARC*APVTLPVPARRVWA Trigger: GGCCCACACTCTCCTCGCAGGTACTGGGAGAGTGACAGGAGCCCAGCACCTGGCATAGAGAAGGCTCTCAGAGTCTGGACTAGAGACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 90 bp | AGTGTGGGCCCTGCGAACCACTGCCCCACATGCATCCCTCTCAGATaGCCTAAGCCAATCAACCAGGTCTCTCCCTCTGCAGCATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVGPANHCPTCIPLR*PKPINQVSPSAACS Trigger: ACTACATGCTGCAGAGGGAGAGACCTGGTTGATTGGCTTAGGTCATCTGAGAGGGATGCATGTGGGGCAGTGGTTCGCAGGGCCCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 90 bp | TACAGCCACCCTTCCAGGCATGTAGCGTCATCTCCATTTTGCGGCTaGAGTTTAGGGAGAGTAAGTACGCTCCTCCAAGTTACACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: YSHPSRHVASSPFCG*SLGRVSTLLQVTQL Trigger: TAGCTGTGTAACTTGGAGGAGCGTACTTACTCTCCCTAAACTTCAGCCGCAAAATGGAGATGACGCTACATGCCTGGAAGGGTGGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 90 bp | TCCAAAAAGATATGTTTAAGCCCTAACACCCAGTACCCAGAAACGTaGCTTTCATTGGAGATAGGGTCTTTGCAGAGGTTAATCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SKKICLSPNTQYPET*LSLEIGSLQRLIKL Trigger: TAACTTGATTAACCTCTGCAAAGACCCTATCTCCAATGAAAGTCACGTTTCTGGGTACTGGGTGTTAGGGCTTAAACATATCTTTTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS GCA 72 bp | TCTAGTCCAGACTCTGAGAGCCTTCTCTATGCCAGGTaGTGGGCTCCTGTCACTCTCCCAGTACCTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPDSESLLYAR*WAPVTLPVPAR Trigger: CCTCGCAGGTACTGGGAGAGTGACAGGAGCCCAGCACCTGGCATAGAGAAGGCTCTCAGAGTCTGGACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CCA 72 bp | AGTCCAGACTCTGAGAGCCTTCTCTATGCCAGGTGCTaGGCTCCTGTCACTCTCCCAGTACCTGCGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPDSESLLYARC*APVTLPVPARR Trigger: TCTCCTCGCAGGTACTGGGAGAGTGACAGGAGCCCAGCACCTGGCATAGAGAAGGCTCTCAGAGTCTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 72 bp | CCTGCGAACCACTGCCCCACATGCATCCCTCTCAGATaGCCTAAGCCAATCAACCAGGTCTCTCCCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PANHCPTCIPLR*PKPINQVSPSA Trigger: TGCAGAGGGAGAGACCTGGTTGATTGGCTTAGGTCATCTGAGAGGGATGCATGTGGGGCAGTGGTTCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CAA 90 bp | GGGGCAATGGACGTCTCTGGTTCTGAGTTGCAGAATCTGCACGCTTaGTTAGAGCAGCAATGGGAAACTGACACAGCCATCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAMDVSGSELQNLHA*LEQQWETDTAISSS Trigger: GCTGGAGGAGATGGCTGTGTCAGTTTCCCATTGCTGCTCTAACAAAGCGTGCAGATTCTGCAACTCAGAACCAGAGACGTCCATTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS TCA 72 bp | TCTCTGGAGCTGTGGGGCAATGGACGTCTCTGGTTCTaGGTTGCAGAATCTGCACGCTTTGTTAGAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLELWGNGRLWF*VAESARFVRAA Trigger: TGCTGCTCTAACAAAGCGTGCAGATTCTGCAACTCAGAACCAGAGACGTCCATTGCCCCACAGCTCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CAA 72 bp | TGGAGCTGTGGGGCAATGGACGTCTCTGGTTCTGAGTaGCAGAATCTGCACGCTTTGTTAGAGCAGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: WSCGAMDVSGSE*QNLHALLEQQW Trigger: CCATTGCTGCTCTAACAAAGCGTGCAGATTCTGCAACTCAGAACCAGAGACGTCCATTGCCCCACAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CAA 72 bp | CAGCCACCCTTCCAGGCATGTAGCGTCATCTCCATTTaGCGGCTGAAGTTTAGGGAGAGTAAGTACGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPFQACSVISI*RLKFRESKYAP Trigger: AGGAGCGTACTTACTCTCCCTAAACTTCAGCCGCAAAATGGAGATGACGCTACATGCCTGGAAGGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CAA 90 bp | GGGTTGGTACAGCCACCCTTCCAGGCATGTAGCGTCATCTCCATTTaGCGGCTGAAGTTTAGGGAGAGTAAGTACGCTCCTCCAAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GLVQPPFQACSVISI*RLKFRESKYAPPSY Trigger: GTAACTTGGAGGAGCGTACTTACTCTCCCTAAACTTCAGCCGCAAAATGGAGATGACGCTACATGCCTGGAAGGGTGGCTGTACCAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||
| CDS CAA 72 bp | GACGTCTCTGGTTCTGAGTTGCAGAATCTGCACGCTTaGTTAGAGCAGCAATGGGAAACTGACACAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: DVSGSELQNLHA*LEQQWETDTAI Trigger: GATGGCTGTGTCAGTTTCCCATTGCTGCTCTAACAAAGCGTGCAGATTCTGCAACTCAGAACCAGAGACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526254.1 |
||