Pregenerated sensors for LINC02739 (Homo sapiens)
Ensembl gene IDs: ENSG00000255008Ensembl transcript IDs: ENST00000533552.3, ENST00000661408.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAAGCTGGACAAAGCCCGTGCGCCGAACGCTTTCGAGGACTTCTTTaGCCAAGAGGGGGCCCGGGCTGTCACCATTCCCGGCAAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGQSPCAERFRGLL*PRGGPGCHHSRQAR Trigger: GCGGGCTTGCCGGGAATGGTGACAGCCCGGGCCCCCTCTTGGCCAAAGAAGTCCTCGAAAGCGTTCGGCGCACGGGCTTTGTCCAGCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS GCA 90 bp | CGCAGCGCCCACGGCTGCCTAGAACCCGAAAGAAGAGGAGCGGGGTaGGGGGACACAGGGTTGCTCAAGAAAGTGAGCTATGCGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSAHGCLEPERRGAG*GDTGLLKKVSYAQC Trigger: GCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCACCCCGCTCCTCTTCTTTCGGGTTCTAGGCAGCCGTGGGCGCTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS GCA 90 bp | TTGAACCCGGGAGGCGGAGGTTACAGTCAGCCGAGATCACGCCACTaGACTCCAGCATGGGAGCAAGACTCCATCGTGTTGGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNPGGGGYSQPRSRH*TPAWEQDSIVLARL Trigger: CAGCCTGGCCAACACGATGGAGTCTTGCTCCCATGCTGGAGTGCAGTGGCGTGATCTCGGCTGACTGTAACCTCCGCCTCCCGGGTTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS GCA 90 bp | AGGAGCGGGGTGCGGGGACACAGGGTTGCTCAAGAAAGTGAGCTATaGGCAGTGCTCCGGAAGAGCTTGTCTCAAACCAGGTCCCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSGVRGHRVAQESEL*AVLRKSLSQTRSQV Trigger: CACTTGGGACCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCACCCCGCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 90 bp | AAAGAAGAGGAGCGGGGTGCGGGGACACAGGGTTGCTCAAGAAAGTaGGCTATGCGCAGTGCTCCGGAAGAGCTTGTCTCAAACCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEEERGAGTQGCSRK*AMRSAPEELVSNQV Trigger: GACCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCACCCCGCTCCTCTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 90 bp | TGGTTAAAGACATCAGGCTGCCCCTTCCGAGGAGACGCCACTTCGTaGTTCCTTGCCTCCATCCCAGGTGCCCACCTGAAATGTCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLKTSGCPFRGDATS*FLASIPGAHLKCHL Trigger: AAGGTGACATTTCAGGTGGGCACCTGGGATGGAGGCAAGGAATCACGAAGTGGCGTCTCCTCGGAAGGGGCAGCCTGATGTCTTTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS TCA 90 bp | AAGGTGCAAGGTGGTGAACGAGTTCCTGGGCTCTTCTTTTGTGTGTaGTCCAATCCAATTCCGATGCAGAAATCCGGCGAGGGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVQGGERVPGLFFCV*SNPIPMQKSGEGWE Trigger: CTCCCAGCCCTCGCCGGATTTCTGCATCGGAATTGGATTGGATCACACACAAAAGAAGAGCCCAGGAACTCGTTCACCACCTTGCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS TCA 90 bp | TATGCGCAGTGCTCCGGAAGAGCTTGTCTCAAACCAGGTCCCAAGTaGGGGCAGAGGCGTAACTTCGTACTGGGCAGTTTAAAAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: YAQCSGRACLKPGPK*GQRRNFVLGSLKGK Trigger: CTTACCTTTTAAACTGCCCAGTACGAAGTTACGCCTCTGCCCTCACTTGGGACCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS GCA 90 bp | CTCAGCTGGGACTCCGTGTCTTCTTCTCTGAGCTTGAATTCCAAATaGTTCTCACCAGGATTCCCCCTCTCCTCTTCAGGCTGTAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSWDSVSSSLSLNSK*FSPGFPLSSSGCSL Trigger: GAGACTACAGCCTGAAGAGGAGAGGGGGAATCCTGGTGAGAAGCATTTGGAATTCAAGCTCAGAGAAGAAGACACGGAGTCCCAGCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 90 bp | TCAGCCAGAAATACCGTGTCTTCTTCTCTGAGCTTGAATTCCAAATaGTTCTCACCAGGATTCCCCCTCTCCTCTTCAGGCTGTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SARNTVSSSLSLNSK*FSPGFPLSSSGCFV Trigger: TACAAAACAGCCTGAAGAGGAGAGGGGGAATCCTGGTGAGAAGCATTTGGAATTCAAGCTCAGAGAAGAAGACACGGTATTTCTGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533552.3 |
||
| CDS GCA 90 bp | ACGGTAGTAACGTTGCTTCCATTAATGAAGACTCTGTTACCATTATaGCGTGAACTAACAGGCAAGGTGCAAGGTGGTGAACGAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TVVTLLPLMKTLLPL*RELTGKVQGGERVP Trigger: AGGAACTCGTTCACCACCTTGCACCTTGCCTGTTAGTTCACGGCATAATGGTAACAGAGTCTTCATTAATGGAAGCAACGTTACTACCGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CCA 72 bp | CAAAGCCCGTGCGCCGAACGCTTTCGAGGACTTCTTTaGCCAAGAGGGGGCCCGGGCTGTCACCATTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QSPCAERFRGLL*PRGGPGCHHSR Trigger: CCGGGAATGGTGACAGCCCGGGCCCCCTCTTGGCCAAAGAAGTCCTCGAAAGCGTTCGGCGCACGGGCTTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS CAA 72 bp | ACAAAGCCCGTGCGCCGAACGCTTTCGAGGACTTCTTaGGCCAAGAGGGGGCCCGGGCTGTCACCATTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TKPVRRTLSRTS*AKRGPGLSPFP Trigger: CGGGAATGGTGACAGCCCGGGCCCCCTCTTGGCCAAAGAAGTCCTCGAAAGCGTTCGGCGCACGGGCTTTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS CAA 90 bp | AAAAGCTGGACAAAGCCCGTGCGCCGAACGCTTTCGAGGACTTCTTaGGCCAAGAGGGGGCCCGGGCTGTCACCATTCCCGGCAAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KSWTKPVRRTLSRTS*AKRGPGLSPFPASP Trigger: CGGGCTTGCCGGGAATGGTGACAGCCCGGGCCCCCTCTTGGCCAAAGAAGTCCTCGAAAGCGTTCGGCGCACGGGCTTTGTCCAGCTTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS CCA 72 bp | GCGCCCGGCCCCGGTCCTTGTTACGGTTTAAAAAGCTaGACAAAGCCCGTGCGCCGAACGCTTTCGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: APGPGPCYGLKS*TKPVRRTLSRT Trigger: AGTCCTCGAAAGCGTTCGGCGCACGGGCTTTGTCCAGCTTTTTAAACCGTAACAAGGACCGGGGCCGGGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 72 bp | GAGCGGGGTGCGGGGACACAGGGTTGCTCAAGAAAGTaGGCTATGCGCAGTGCTCCGGAAGAGCTTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ERGAGTQGCSRK*AMRSAPEELVS Trigger: TGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCACCCCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 72 bp | ACATCAGGCTGCCCCTTCCGAGGAGACGCCACTTCGTaGTTCCTTGCCTCCATCCCAGGTGCCCACCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSGCPFRGDATS*FLASIPGAHLK Trigger: TTTCAGGTGGGCACCTGGGATGGAGGCAAGGAATCACGAAGTGGCGTCTCCTCGGAAGGGGCAGCCTGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 90 bp | TGCCTAGAACCCGAAAGAAGAGGAGCGGGGTGCGGGGACACAGGGTaGCTCAAGAAAGTGAGCTATGCGCAGTGCTCCGGAAGAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLEPERRGAGCGDTG*LKKVSYAQCSGRAC Trigger: ACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCACCCCGCTCCTCTTCTTTCGGGTTCTAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 72 bp | AAACCGCGCAGGGGAGAGAAAAAGCCGCCCACGAATTaGACTGTCTGCACCGCCTACGCGTGTCTTAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KPRRGEKKPPTN*TVCTAYACLSP Trigger: AGGGCTAAGACACGCGTAGGCGGTGCAGACAGTTCAATTCGTGGGCGGCTTTTTCTCTCCCCTGCGCGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS TCA 72 bp | GGCTGGGAGGAGGATTTAGAGACTGCGTGGCAAACGTaGATCCTCAGTTCTGCAAAACCGCGCAGGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWEEDLETAWQT*ILSSAKPRRGE Trigger: CTCTCCCCTGCGCGGTTTTGCAGAACTGAGGATTCACGTTTGCCACGCAGTCTCTAAATCCTCCTCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 72 bp | GTGCGGGGACACAGGGTTGCTCAAGAAAGTGAGCTATaGGCAGTGCTCCGGAAGAGCTTGTCTCAAACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRGHRVAQESEL*AVLRKSLSQTR Trigger: CCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTCCCCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS CAA 72 bp | CAAGAAAGTGAGCTATGCGCAGTGCTCCGGAAGAGCTaGTCTCAAACCAGGTCCCAAGTGAGGGCAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QESELCAVLRKS*SQTRSQVRAEA Trigger: CGCCTCTGCCCTCACTTGGGACCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS CAA 90 bp | GCACCGCCTACGCGTGTCTTAGCCCTGAACCCAAAGCGCATCCAGTaGGAAACCACAGTTCAGTGGTTAAAGACATCAGGCTGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: APPTRVLALNPKRIQ*ETTVQWLKTSGCPF Trigger: GAAGGGGCAGCCTGATGTCTTTAACCACTGAACTGTGGTTTCCAACTGGATGCGCTTTGGGTTCAGGGCTAAGACACGCGTAGGCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 72 bp | GACACAGGGTTGCTCAAGAAAGTGAGCTATGCGCAGTaGTCCGGAAGAGCTTGTCTCAAACCAGGTCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DTGLLKKVSYAQ*SGRACLKPGPK Trigger: CTTGGGACCTGGTTTGAGACAAGCTCTTCCGGAGCACTGCGCATAGCTCACTTTCTTGAGCAACCCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||
| CDS TCA 72 bp | GGTGGTGAACGAGTTCCTGGGCTCTTCTTTTGTGTGTaGTCCAATCCAATTCCGATGCAGAAATCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGERVPGLFFCV*SNPIPMQKSGE Trigger: CTCGCCGGATTTCTGCATCGGAATTGGATTGGATCACACACAAAAGAAGAGCCCAGGAACTCGTTCACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 72 bp | ACGCGTGTCTTAGCCCTGAACCCAAAGCGCATCCAGTaGGAAACCACAGTTCAGTGGTTAAAGACATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TRVLALNPKRIQ*ETTVQWLKTSG Trigger: GCCTGATGTCTTTAACCACTGAACTGTGGTTTCCAACTGGATGCGCTTTGGGTTCAGGGCTAAGACACGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 72 bp | GGCAACATGGCGACACCCCGTCTCTGTTTTGTAAACTaGCAGGTGTTGAAGATCAAACGGTGTCCTCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GNMATPRLCFVN*QVLKIKRCPLK Trigger: TTTCAGAGGACACCGTTTGATCTTCAACACCTGGCAGTTTACAAAACAGAGACGGGGTGTCGCCATGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 90 bp | GGCAACATGGCGACACCCCGTCTCTGTTTTGTAAACTGCCAGGTGTaGAAGATCAAACGGTGTCCTCTGAAATTCAGTTCTTCCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: GNMATPRLCFVNCQV*KIKRCPLKFSSSCI Trigger: TATGCAGGAAGAACTGAATTTCAGAGGACACCGTTTGATCTTCAACACCTGGCAGTTTACAAAACAGAGACGGGGTGTCGCCATGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 90 bp | TCTGATGCTCTACCGACTGAGCTATCCGGGCTCACGGTAGTAACGTaGCTTCCATTAATGAAGACTCTGTTACCATTATGCCGTGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: SDALPTELSGLTVVT*LPLMKTLLPLCREL Trigger: TAGTTCACGGCATAATGGTAACAGAGTCTTCATTAATGGAAGCAACGTTACTACCGTGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 72 bp | GCGACACCCCGTCTCTGTTTTGTAAACTGCCAGGTGTaGAAGATCAAACGGTGTCCTCTGAAATTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATPRLCFVNCQV*KIKRCPLKFSS Trigger: AGAACTGAATTTCAGAGGACACCGTTTGATCTTCAACACCTGGCAGTTTACAAAACAGAGACGGGGTGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS CAA 72 bp | CTACCGACTGAGCTATCCGGGCTCACGGTAGTAACGTaGCTTCCATTAATGAAGACTCTGTTACCATTATGC | + |
|
Preference number: 6 (lower is better) Translates to: LPTELSGLTVVT*LPLMKTLLPLC Trigger: GCATAATGGTAACAGAGTCTTCATTAATGGAAGCAACGTTACTACCGTGAGCCCGGATAGCTCAGTCGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 72 bp | ACGTTGCTTCCATTAATGAAGACTCTGTTACCATTATaGCGTGAACTAACAGGCAAGGTGCAAGGTGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TLLPLMKTLLPL*RELTGKVQGGE Trigger: TTCACCACCTTGCACCTTGCCTGTTAGTTCACGGCATAATGGTAACAGAGTCTTCATTAATGGAAGCAACGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661408.1 |
||
| CDS GCA 72 bp | AAGATCAAACGGTGTCCTCTGAAATTCAGTTCTTCCTaGATACAGCGTCTGGATATCTTTGCTGTAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KIKRCPLKFSSS*IQRLDIFAVIP Trigger: TGGGATTACAGCAAAGATATCCAGACGCTGTATGCAGGAAGAACTGAATTTCAGAGGACACCGTTTGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000533552.3 ENST00000661408.1 |
||