Pregenerated sensors for LINC02735 (Homo sapiens)
Ensembl gene IDs: ENSG00000255433Ensembl transcript IDs: ENST00000526436.1, ENST00000532274.5, ENST00000631340.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTGTTGCTGGGGATGGAGGGTGGGGAGCCTGCCCTAAGTATTGTTaGCCTCTATCCACTAGATATCAGGAACAAGCTCCCACTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SVAGDGGWGACPKYC*PLSTRYQEQAPTSS Trigger: GGAGGAAGTGGGAGCTTGTTCCTGATATCTAGTGGATAGAGGCCAACAATACTTAGGGCAGGCTCCCCACCCTCCATCCCCAGCAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS TCA 90 bp | GCCATTCCCATAATGGCAAGGATGTGGAGGCAAGGAAAGTGTGGATaGATGAGGCTCCCATATGCTTCATCAAAGAAAAGACTCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: AIPIMARMWRQGKCG*MRLPYASSKKRLNS Trigger: GGAGTTGAGTCTTTTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTCCACATCCTTGCCATTATGGGAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 90 bp | ACTAGATATCAGGAACAAGCTCCCACTTCCTCCCCAGCCAAGTCATaGCATTTAGTCTGTCTTCGGATATCGCCTATAGTTCATAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: TRYQEQAPTSSPAKS*HLVCLRISPIVHKG Trigger: TCCCTTATGAACTATAGGCGATATCCGAAGACAGACTAAATGCCATGACTTGGCTGGGGAGGAAGTGGGAGCTTGTTCCTGATATCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS TCA 90 bp | GAGACTGGGGTTGAAGGAAGCGTGCGCCTATTAAGGGGTAACACATaGGAGAGTTTCTTTGTGGATTTGGAGCAGTTCTGTATCTTGATT | + |
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Preference number: 5 (lower is better) Translates to: ETGVEGSVRLLRGNT*ESFFVDLEQFCILI Trigger: AATCAAGATACAGAACTGCTCCAAATCCACAAAGAAACTCTCTCATGTGTTACCCCTTAATAGGCGCACGCTTCCTTCAACCCCAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526436.1 |
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| CDS GCA 90 bp | GAAGCACACTATTCCAGTCAAAGCCTTGGTAAAATAACCAGTTTCTaGAATGGTGTCGGGCAAATGGTTAGGCTCACTCATCAGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: EAHYSSQSLGKITSF*NGVGQMVRLTHQLS Trigger: ACTGAGCTGATGAGTGAGCCTAACCATTTGCCCGACACCATTGCAGAAACTGGTTATTTTACCAAGGCTTTGACTGGAATAGTGTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000526436.1 ENST00000532274.5 ENST00000631340.1 |
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| CDS CCA 90 bp | TGTCTTCGGATATCGCCTATAGTTCATAAGGGACAAAGTCACTTCTaGTTGAGCATCACTGGCTTATATGCCATTCCCATAATGGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: CLRISPIVHKGQSHF*LSITGLYAIPIMAR Trigger: CCTTGCCATTATGGGAATGGCATATAAGCCAGTGATGCTCAACCAGAAGTGACTTTGTCCCTTATGAACTATAGGCGATATCCGAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 90 bp | ATATGCCATTCCCATAATGGCAAGGATGTGGAGGCAAGGAAAGTGTaGATGAATGAGGCTCCCATATGCTTCATCAAAGAAAAGACTCAA | + |
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Preference number: 5 (lower is better) Translates to: ICHSHNGKDVEARKV*MNEAPICFIKEKTQ Trigger: TTGAGTCTTTTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTCCACATCCTTGCCATTATGGGAATGGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 90 bp | CTGAAGGACATGATCCAATTTGAGATTTTCAAGGATCACTCATTCTaGATACACAGGTCAGGAACTCTGTCCAGAGACTGTGTAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: LKDMIQFEIFKDHSF*IHRSGTLSRDCVDK Trigger: CTTGTCTACACAGTCTCTGGACAGAGTTCCTGACCTGTGTATCCAGAATGAGTGATCCTTGAAAATCTCAAATTGGATCATGTCCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532274.5 |
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| CDS GCA 90 bp | AAGGATGTGGAGGCAAGGAAAGTGTGGATGAATGAGGCTCCCATATaGTTCATCAAAGAAAAGACTCAACTCCTAACAATGCTTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: KDVEARKVWMNEAPI*FIKEKTQLLTMLEH Trigger: ATGTTCAAGCATTGTTAGGAGTTGAGTCTTTTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTCCACATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS TCA 90 bp | ACTCAACTCCTAACAATGCTTGAACATTTGGCTTCAACTTTTAGCTaGCTCACAGCTGATGACAAAATACTGTTCTCATACCGTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: TQLLTMLEHLASTFS*LTADDKILFSYRAG Trigger: ACCAGCACGGTATGAGAACAGTATTTTGTCATCAGCTGTGAGTCAGCTAAAAGTTGAAGCCAAATGTTCAAGCATTGTTAGGAGTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | GGGGATGGAGGGTGGGGAGCCTGCCCTAAGTATTGTTaGCCTCTATCCACTAGATATCAGGAACAAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GDGGWGACPKYC*PLSTRYQEQAP Trigger: GGGAGCTTGTTCCTGATATCTAGTGGATAGAGGCCAACAATACTTAGGGCAGGCTCCCCACCCTCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | TGGACCAGATACTTCTCTGTTGCTGGGGATGGAGGGTaGGGAGCCTGCCCTAAGTATTGTTGGCCTCTATCC | + |
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Preference number: 6 (lower is better) Translates to: WTRYFSVAGDGG*GACPKYCWPLS Trigger: GGATAGAGGCCAACAATACTTAGGGCAGGCTCCCCACCCTCCATCCCCAGCAACAGAGAAGTATCTGGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | CAGGAACAAGCTCCCACTTCCTCCCCAGCCAAGTCATaGCATTTAGTCTGTCTTCGGATATCGCCTATAGTT | + |
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Preference number: 6 (lower is better) Translates to: QEQAPTSSPAKS*HLVCLRISPIV Trigger: AACTATAGGCGATATCCGAAGACAGACTAAATGCCATGACTTGGCTGGGGAGGAAGTGGGAGCTTGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS GCA 72 bp | ACAAAGTCACTTCTGGTTGAGCATCACTGGCTTATATaGCATTCCCATAATGGCAAGGATGTGGAGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TKSLLVEHHWLI*HSHNGKDVEAR Trigger: CCTTGCCTCCACATCCTTGCCATTATGGGAATGGCATATAAGCCAGTGATGCTCAACCAGAAGTGACTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CAA 72 bp | GGCACAGAGAGGTTAAGACTTACCCAGCATTATACATaGAGTAAGTTACAGACCCAGGCTGTACCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: GTERLRLTQHYT*SKLQTQAVPRI Trigger: GATCCTGGGTACAGCCTGGGTCTGTAACTTACTCAATGTATAATGCTGGGTAAGTCTTAACCTCTCTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | TCCCATAATGGCAAGGATGTGGAGGCAAGGAAAGTGTaGATGAATGAGGCTCCCATATGCTTCATCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SHNGKDVEARKV*MNEAPICFIKE Trigger: TTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTCCACATCCTTGCCATTATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CAA 90 bp | CTTCGGATATCGCCTATAGTTCATAAGGGACAAAGTCACTTCTGGTaGAGCATCACTGGCTTATATGCCATTCCCATAATGGCAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LRISPIVHKGQSHFW*SITGLYAIPIMARM Trigger: CATCCTTGCCATTATGGGAATGGCATATAAGCCAGTGATGCTCAACCAGAAGTGACTTTGTCCCTTATGAACTATAGGCGATATCCGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS TCA 72 bp | ATAATGGCAAGGATGTGGAGGCAAGGAAAGTGTGGATaGATGAGGCTCCCATATGCTTCATCAAAGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: IMARMWRQGKCG*MRLPYASSKKR Trigger: TCTTTTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTCCACATCCTTGCCATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS GCA 72 bp | TATTCCAGTCAAAGCCTTGGTAAAATAACCAGTTTCTaGAATGGTGTCGGGCAAATGGTTAGGCTCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: YSSQSLGKITSF*NGVGQMVRLTH Trigger: ATGAGTGAGCCTAACCATTTGCCCGACACCATTGCAGAAACTGGTTATTTTACCAAGGCTTTGACTGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000526436.1 ENST00000532274.5 ENST00000631340.1 |
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| CDS GCA 72 bp | GAGGCAAGGAAAGTGTGGATGAATGAGGCTCCCATATaGTTCATCAAAGAAAAGACTCAACTCCTAACAATG | + |
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Preference number: 6 (lower is better) Translates to: EARKVWMNEAPI*FIKEKTQLLTM Trigger: CATTGTTAGGAGTTGAGTCTTTTCTTTGATGAAGCATATGGGAGCCTCATTCATCCACACTTTCCTTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CAA 72 bp | TCGCCTATAGTTCATAAGGGACAAAGTCACTTCTGGTaGAGCATCACTGGCTTATATGCCATTCCCATAATG | + |
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Preference number: 6 (lower is better) Translates to: SPIVHKGQSHFW*SITGLYAIPIM Trigger: CATTATGGGAATGGCATATAAGCCAGTGATGCTCAACCAGAAGTGACTTTGTCCCTTATGAACTATAGGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS TCA 72 bp | CACCTTTACCATCAGCACAGCAAGTGCTTAGGAGTTTaGAGAACTCTTTCACATACATTGAATCCTCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: HLYHQHSKCLGV*RTLSHTLNPPN Trigger: GTTAGGAGGATTCAATGTATGTGAAAGAGTTCTTCAAACTCCTAAGCACTTGCTGTGCTGATGGTAAAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | ATATCGCCTATAGTTCATAAGGGACAAAGTCACTTCTaGTTGAGCATCACTGGCTTATATGCCATTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: ISPIVHKGQSHF*LSITGLYAIPI Trigger: TATGGGAATGGCATATAAGCCAGTGATGCTCAACCAGAAGTGACTTTGTCCCTTATGAACTATAGGCGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526436.1 ENST00000532274.5 |
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| CDS CCA 72 bp | GTTTCTTCCTTCTCCCCTTGGTACCTTGAGAGGATTTaGATTTTACTTGAAGTACAACTGGTCATCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: VSSFSPWYLERI*ILLEVQLVIID Trigger: GTCAATGATGACCAGTTGTACTTCAAGTAAAATCCAAATCCTCTCAAGGTACCAAGGGGAGAAGGAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532274.5 |
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| CDS CAA 90 bp | CCTGGTGAAATCCAAATAATATCTGCACCTGAGTTAACAGTATTATaGCATCACAGTCACTTTTCTGGTTTTGGCCATTTACTATGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PGEIQIISAPELTVL*HHSHFSGFGHLLWL Trigger: TAACCATAGTAAATGGCCAAAACCAGAAAAGTGACTGTGATGCAATAATACTGTTAACTCAGGTGCAGATATTATTTGGATTTCACCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526436.1 |
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| CDS CAA 72 bp | ATCCAAATAATATCTGCACCTGAGTTAACAGTATTATaGCATCACAGTCACTTTTCTGGTTTTGGCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: IQIISAPELTVL*HHSHFSGFGHL Trigger: TAAATGGCCAAAACCAGAAAAGTGACTGTGATGCAATAATACTGTTAACTCAGGTGCAGATATTATTTGGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526436.1 |
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