Pregenerated sensors for LINC02733 (Homo sapiens)
Ensembl gene IDs: ENSG00000255553Ensembl transcript IDs: ENST00000524942.1, ENST00000658933.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGCTCTGGTCGGACTTCTCTCTGTCTTTGCACTCAGGCTCAGCTaGCTCACGGCTCGTACCGGAGGGACCGGGCCCATGGTTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WALVGLLSVFALRLS*LTARTGGTGPMVGH Trigger: GTGGCCAACCATGGGCCCGGTCCCTCCGGTACGAGCCGTGAGCCAGCTGAGCCTGAGTGCAAAGACAGAGAGAAGTCCGACCAGAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 90 bp | AAGGCTCAGAGCTCCCAGGTCAATGTCATCTTCTTCATGGAGCTGTaGCTGGAGATGACGCCCCCTTTCTCTGCTCCATTAAACCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: KAQSSQVNVIFFMEL*LEMTPPFSAPLNPV Trigger: CACCGGGTTTAATGGAGCAGAGAAAGGGGGCGTCATCTCCAGGCACAGCTCCATGAAGAAGATGACATTGACCTGGGAGCTCTGAGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS GCA 90 bp | GACCACACCTTAGGTATTTCCATCTCTCCTTATGCAGCATCCAGGTaGATCACTCACGTGCAGGAGGGATTGGCTGAACACAGAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: DHTLGISISPYAASR*ITHVQEGLAEHRGR Trigger: CCTGCCTCTGTGTTCAGCCAATCCCTCCTGCACGTGAGTGATGCACCTGGATGCTGCATAAGGAGAGATGGAAATACCTAAGGTGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS GCA 90 bp | TCTCCTTATATCTGCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTTaGCTTGTCAATTTCAGTTCCTCTGCTCCAGCAGACCTTCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SPYICCWQTRSGVRV*LVNFSSSAPADLLR Trigger: GCGAAGAAGGTCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATATAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 90 bp | TCTTTCCTGCTGTGTGTGCCAGCGGCTGTGTTGTGGTTGTGGGTGTaGTTGCTTTCGAGTCTTCGTTCTGCTATAAGCCCCTTGGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: SFLLCVPAAVLWLWV*LLSSLRSAISPLEV Trigger: TACTTCCAAGGGGCTTATAGCAGAACGAAGACTCGAAAGCAAGCACACCCACAACCACAACACAGCCGCTGGCACACACAGCAGGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS GCA 90 bp | GGCTGTGTTGTGGTTGTGGGTGTGCTTGCTTTCGAGTCTTCGTTCTaGTATAAGCCCCTTGGAAGTAAGGACCACACCTTAGGTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: GCVVVVGVLAFESSF*YKPLGSKDHTLGIS Trigger: GGAAATACCTAAGGTGTGGTCCTTACTTCCAAGGGGCTTATAGCAGAACGAAGACTCGAAAGCAAGCACACCCACAACCACAACACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS TCA 90 bp | GCTAACATGGCCAAGAACATGGAATCAGGGGTTCTGGCCTGTCCCTaGTGCTACAGTAGTTTCTCAGCTTCCTGCATGGTTTTCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: ANMAKNMESGVLACP*CYSSFSASCMVFLS Trigger: ACTCAAGAAAACCATGCAGGAAGCTGAGAAACTACTGTAGCATCAGGGACAGGCCAGAACCCCTGATTCCATGTTCTTGGCCATGTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 90 bp | GGCGGGCTAAAGCTTGCTCCGTGCCAAGCAATCTGGGTAGCAGACTaGGATTGGATCCCAGTATTGTATAAAGAAGAAGCATTAAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: GGLKLAPCQAIWVAD*DWIPVLYKEEALKA Trigger: AGCTTTTAATGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGGAGCAAGCTTTAGCCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 90 bp | AACAGTTTGCTGTTTGATCACATAGCCTCCAGTGGAATGCTGAGTTaGTCACAATCCCTTTGGCCTTTTCAGCACCCAACATCTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: NSLLFDHIASSGMLS*SQSLWPFQHPTSPL Trigger: AAGGGGAGATGTTGGGTGCTGAAAAGGCCAAAGGGATTGTGACCAACTCAGCATTCCACTGGAGGCTATGTGATCAAACAGCAAACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 90 bp | CTAAAGCTTGCTCCGTGCCAAGCAATCTGGGTAGCAGACTGGGATTaGATCCCAGTATTGTATAAAGAAGAAGCATTAAAAGCTTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LKLAPCQAIWVADWD*IPVLYKEEALKACH Trigger: GTGGCAAGCTTTTAATGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGGAGCAAGCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 90 bp | TTATGCAGCATCCAGGTGCATCACTCACGTGCAGGAGGGATTGGCTaGACACAGAGGCAGGTTAACTCAAGAATAAACTTTATTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: LCSIQVHHSRAGGIG*TQRQVNSRINFIIC Trigger: GCAAATAATAAAGTTTATTCTTGAGTTAACCTGCCTCTGTGTTCAGCCAATCCCTCCTGCACGTGAGTGATGCACCTGGATGCTGCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS TCA 90 bp | TTTCTCCACTTGGGATTTCTTCCAGCTGAAAGCTTACTCATTATATaGAGGCTCAGAGCTCCCAGGTCAATGTCATCTTCTTCATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: FLHLGFLPAESLLII*RLRAPRSMSSSSWS Trigger: GCTCCATGAAGAAGATGACATTGACCTGGGAGCTCTGAGCCTTCATATAATGAGTAAGCTTTCAGCTGGAAGAAATCCCAAGTGGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS CCA 90 bp | ATAAAGCTCAGGAGGAGTGTCACTCCAAAGAATAGGTCATACTACTaGGGGATTGGGAACATATGCCCAATATGTTTTTGCCTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: IKLRRSVTPKNRSYY*GIGNICPICFCLCT Trigger: TGTGCAGAGGCAAAAACATATTGGGCATATGTTCCCAATCCCCCAGTAGTATGACCTATTCTTTGGAGTGACACTCCTCCTGAGCTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | GTCGGACTTCTCTCTGTCTTTGCACTCAGGCTCAGCTaGCTCACGGCTCGTACCGGAGGGACCGGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: VGLLSVFALRLS*LTARTGGTGPM Trigger: CATGGGCCCGGTCCCTCCGGTACGAGCCGTGAGCCAGCTGAGCCTGAGTGCAAAGACAGAGAGAAGTCCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | ATGGGGGTTGATGTCATTGGGCTCTGGTCGGACTTCTCTCTGTCTTaGCACTCAGGCTCAGCTGGCTCACGGCTCGTACCGGAGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: MGVDVIGLWSDFSLS*HSGSAGSRLVPEGP Trigger: CGGTCCCTCCGGTACGAGCCGTGAGCCAGCTGAGCCTGAGTGCAAAGACAGAGAGAAGTCCGACCAGAGCCCAATGACATCAACCCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | ATGTCATTGGGCTCTGGTCGGACTTCTCTCTGTCTTTaGACTCAGGCTCAGCTGGCTCACGGCTCGTACCGG | + |
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Preference number: 6 (lower is better) Translates to: MSLGSGRTSLCL*TQAQLAHGSYR Trigger: CCGGTACGAGCCGTGAGCCAGCTGAGCCTGAGTGCAAAGACAGAGAGAAGTCCGACCAGAGCCCAATGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | GGCACCCACACGGCTTATCCATCTCCTTATATCTGCTaGTGGCAGACTCGTTCCGGGGTCCGTGTTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTHTAYPSPYIC*WQTRSGVRVCL Trigger: AAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATATAAGGAGATGGATAAGCCGTGTGGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | GCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTTGCCTaGTCAATTTCAGTTCCTCTGCTCCAGCAGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: AAGRLVPGSVFA*SISVPLLQQTF Trigger: GAAGGTCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 72 bp | TCCTCTGCTCCAGCAGACCTTCTTCGCTCACATCCTTaGAGTCCTGTGTTCAGACGCCACTTGTTGTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSAPADLLRSHP*SPVFRRHLLCA Trigger: GGCGCACAACAAGTGGCGTCTGAACACAGGACTTCAAGGATGTGAGCGAAGAAGGTCTGCTGGAGCAGAGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | CTGTGTGTGCCAGCGGCTGTGTTGTGGTTGTGGGTGTaGTTGCTTTCGAGTCTTCGTTCTGCTATAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LCVPAAVLWLWV*LLSSLRSAISP Trigger: GGGGCTTATAGCAGAACGAAGACTCGAAAGCAAGCACACCCACAACCACAACACAGCCGCTGGCACACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS GCA 72 bp | CATGGAGCTGTGCCTGGAGATGACGCCCCCTTTCTCTaGTCCATTAAACCCGGTGTCTTTCCTGCTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HGAVPGDDAPFL*SIKPGVFPAVC Trigger: ACACACAGCAGGAAAGACACCGGGTTTAATGGAGCAGAGAAAGGGGGCGTCATCTCCAGGCACAGCTCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS GCA 72 bp | ATCTGCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTTaGCTTGTCAATTTCAGTTCCTCTGCTCCAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ICCWQTRSGVRV*LVNFSSSAPAD Trigger: GTCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | ACCCACACGGCTTATCCATCTCCTTATATCTGCTGCTaGCAGACTCGTTCCGGGGTCCGTGTTTGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: THTAYPSPYICC*QTRSGVRVCLV Trigger: GACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATATAAGGAGATGGATAAGCCGTGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | TGTGTGCCAGCGGCTGTGTTGTGGTTGTGGGTGTGCTaGCTTTCGAGTCTTCGTTCTGCTATAAGCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CVPAAVLWLWVC*LSSLRSAISPL Trigger: CAAGGGGCTTATAGCAGAACGAAGACTCGAAAGCAAGCACACCCACAACCACAACACAGCCGCTGGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS CAA 72 bp | TTCCTCTGCTCCAGCAGACCTTCTTCGCTCACATCCTaGAAGTCCTGTGTTCAGACGCCACTTGTTGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: FLCSSRPSSLTS*KSCVQTPLVVR Trigger: GCGCACAACAAGTGGCGTCTGAACACAGGACTTCAAGGATGTGAGCGAAGAAGGTCTGCTGGAGCAGAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | TATCTGCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTaGCCTTGTCAATTTCAGTTCCTCTGCTCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YLLLADSFRGPC*PCQFQFLCSSR Trigger: TCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | CTTATATCTGCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTTGCCTaGTCAATTTCAGTTCCTCTGCTCCAGCAGACCTTCTTCGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LISAAGRLVPGSVFA*SISVPLLQQTFFAH Trigger: GTGAGCGAAGAAGGTCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | AGCTCCCAGGTCAATGTCATCTTCTTCATGGAGCTGTaGCTGGAGATGACGCCCCCTTTCTCTGCTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: SSQVNVIFFMEL*LEMTPPFSAPL Trigger: TAATGGAGCAGAGAAAGGGGGCGTCATCTCCAGGCACAGCTCCATGAAGAAGATGACATTGACCTGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS CCA 72 bp | AGAGGCGGGCTAAAGCTTGCTCCGTGCCAAGCAATCTaGGTAGCAGACTGGGATTGGATCCCAGTATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RGGLKLAPCQAI*VADWDWIPVLY Trigger: ATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGGAGCAAGCTTTAGCCCGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | ATCTCCTTATATCTGCTGCTGGCAGACTCGTTCCGGGGTCCGTGTTaGCCTTGTCAATTTCAGTTCCTCTGCTCCAGCAGACCTTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: ISLYLLLADSFRGPC*PCQFQFLCSSRPSS Trigger: CGAAGAAGGTCTGCTGGAGCAGAGGAACTGAAATTGACAAGGCAAACACGGACCCCGGAACGAGTCTGCCAGCAGCAGATATAAGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | CAATTTCAGTTCCTCTGCTCCAGCAGACCTTCTTCGCTCACATCCTaGAAGTCCTGTGTTCAGACGCCACTTGTTGTGCGCCTGATTGTG | + |
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Preference number: 6 (lower is better) Translates to: QFQFLCSSRPSSLTS*KSCVQTPLVVRLIV Trigger: CACAATCAGGCGCACAACAAGTGGCGTCTGAACACAGGACTTCAAGGATGTGAGCGAAGAAGGTCTGCTGGAGCAGAGGAACTGAAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 72 bp | GCCAAGAACATGGAATCAGGGGTTCTGGCCTGTCCCTaGTGCTACAGTAGTTTCTCAGCTTCCTGCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: AKNMESGVLACP*CYSSFSASCMV Trigger: AACCATGCAGGAAGCTGAGAAACTACTGTAGCATCAGGGACAGGCCAGAACCCCTGATTCCATGTTCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | TTAGGTATTTCCATCTCTCCTTATGCAGCATCCAGGTaGATCACTCACGTGCAGGAGGGATTGGCTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: LGISISPYAASR*ITHVQEGLAEH Trigger: GTGTTCAGCCAATCCCTCCTGCACGTGAGTGATGCACCTGGATGCTGCATAAGGAGAGATGGAAATACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS GCA 72 bp | CCAATATCAAAGGTGATGTTGGATGTGAACGCTCCCTaGAAATGGGCTTTCGCAAGGTCCCACGGATACTCA | + |
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Preference number: 6 (lower is better) Translates to: PISKVMLDVNAP*KWAFARSHGYS Trigger: TGAGTATCCGTGGGACCTTGCGAAAGCCCATTTGCAGGGAGCGTTCACATCCAACATCACCTTTGATATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | TGGCTAACATGGCCAAGAACATGGAATCAGGGGTTCTaGCCTGTCCCTGATGCTACAGTAGTTTCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: WLTWPRTWNQGF*PVPDATVVSQL Trigger: AAGCTGAGAAACTACTGTAGCATCAGGGACAGGCCAGAACCCCTGATTCCATGTTCTTGGCCATGTTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 72 bp | CTGGGAATTCCAAGAACATGGCATCAGCAGATTCACTaGCTGATGAGGGCTTGCTCTCAGTTTCAAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LGIPRTWHQQIH*LMRACSQFQGW Trigger: CCATCCTTGAAACTGAGAGCAAGCCCTCATCAGTCAGTGAATCTGCTGATGCCATGTTCTTGGAATTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS CCA 72 bp | CTGTTTGATCACATAGCCTCCAGTGGAATGCTGAGTTaGTCACAATCCCTTTGGCCTTTTCAGCACCCAACA | + |
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Preference number: 6 (lower is better) Translates to: LFDHIASSGMLS*SQSLWPFQHPT Trigger: TGTTGGGTGCTGAAAAGGCCAAAGGGATTGTGACCAACTCAGCATTCCACTGGAGGCTATGTGATCAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | CCGTGCCAAGCAATCTGGGTAGCAGACTGGGATTGGATCCCAGTATaGTATAAAGAAGAAGCATTAAAAGCTTGCCACCAATGCCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: PCQAIWVADWDWIPV*YKEEALKACHQCQR Trigger: TCGCTGGCATTGGTGGCAAGCTTTTAATGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 72 bp | ATCCAGGTGCATCACTCACGTGCAGGAGGGATTGGCTaGACACAGAGGCAGGTTAACTCAAGAATAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: IQVHHSRAGGIG*TQRQVNSRINF Trigger: AAAGTTTATTCTTGAGTTAACCTGCCTCTGTGTTCAGCCAATCCCTCCTGCACGTGAGTGATGCACCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS CCA 72 bp | AAGCTTGCTCCGTGCCAAGCAATCTGGGTAGCAGACTaGGATTGGATCCCAGTATTGTATAAAGAAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KLAPCQAIWVAD*DWIPVLYKEEA Trigger: TGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGGAGCAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | CCTAATCCAGATGCTGCGATTCGTAAATGGGAGTGCTaGCTTCCACATCATCTCTTTAATTGGTCCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PNPDAAIRKWEC*LPHHLFNWSFP Trigger: AGGAAAGGACCAATTAAAGAGATGATGTGGAAGGCAGCACTCCCATTTACGAATCGCAGCATCTGGATTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | AGGGAAAACATATCACATTGGACATTATGGCTAACATaGCCAAGAACATGGAATCAGGGGTTCTGGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RENISHWTLWLT*PRTWNQGFWPV Trigger: GACAGGCCAGAACCCCTGATTCCATGTTCTTGGCCATGTTAGCCATAATGTCCAATGTGATATGTTTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | AGGAGGAGTGTCACTCCAAAGAATAGGTCATACTACTaGGGGATTGGGAACATATGCCCAATATGTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RRSVTPKNRSYY*GIGNICPICFC Trigger: GCAAAAACATATTGGGCATATGTTCCCAATCCCCCAGTAGTATGACCTATTCTTTGGAGTGACACTCCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | GCTCCGTGCCAAGCAATCTGGGTAGCAGACTGGGATTaGATCCCAGTATTGTATAAAGAAGAAGCATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: APCQAIWVADWD*IPVLYKEEALK Trigger: TTTTAATGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGCTTGGCACGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | ATAATTGTGAAGATAAACTTGTGGAGTAGGTGGGTTTaGAGGTCCAGTAGGAAGATAGGCCCCACACAATGG | + |
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Preference number: 6 (lower is better) Translates to: IIVKINLWSRWV*RSSRKIGPTQW Trigger: CCATTGTGTGGGGCCTATCTTCCTACTGGACCTCAAAACCCACCTACTCCACAAGTTTATCTTCACAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524942.1 |
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| CDS CAA 72 bp | GTGTCACTCCAAAGAATAGGTCATACTACTGGGGGATaGGGAACATATGCCCAATATGTTTTTGCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VSLQRIGHTTGG*GTYAQYVFASA Trigger: TGCAGAGGCAAAAACATATTGGGCATATGTTCCCAATCCCCCAGTAGTATGACCTATTCTTTGGAGTGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | CACTTGTTTGGCTGTGTGCGTCCAGTTCTCCACGTACTGAGCTGTTaGAATAGAATTATGCAAAGCTACAGAAGACATCACGACAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HLFGCVRPVLHVLSC*NRIMQSYRRHHDKS Trigger: ACTTTTGTCGTGATGTCTTCTGTAGCTTTGCATAATTCTATTCAAACAGCTCAGTACGTGGAGAACTGGACGCACACAGCCAAACAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS TCA 72 bp | TTGGGATTTCTTCCAGCTGAAAGCTTACTCATTATATaGAGGCTCAGAGCTCCCAGGTCAATGTCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGFLPAESLLII*RLRAPRSMSSS Trigger: AGAAGATGACATTGACCTGGGAGCTCTGAGCCTTCATATAATGAGTAAGCTTTCAGCTGGAAGAAATCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524942.1 ENST00000658933.1 |
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| CDS GCA 72 bp | TATCCTAATCCAGATGCTGCGATTCGTAAATGGGAGTaGTGCCTTCCACATCATCTCTTTAATTGGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: YPNPDAAIRKWE*CLPHHLFNWSF Trigger: AAAGGACCAATTAAAGAGATGATGTGGAAGGCAGCACTCCCATTTACGAATCGCAGCATCTGGATTAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | GCAATCTGGGTAGCAGACTGGGATTGGATCCCAGTATaGTATAAAGAAGAAGCATTAAAAGCTTGCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: AIWVADWDWIPV*YKEEALKACHQ Trigger: TTGGTGGCAAGCTTTTAATGCTTCTTCTTTATACAATACTGGGATCCAATCCCAGTCTGCTACCCAGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 90 bp | AAATCAAGAATTTTGTTTTGTAATTCACCAATATCAAAGGTGATGTaGGATGTGAACGCTCCCTGCAAATGGGCTTTCGCAAGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: KSRILFCNSPISKVM*DVNAPCKWAFARSH Trigger: GTGGGACCTTGCGAAAGCCCATTTGCAGGGAGCGTTCACATCCAACATCACCTTTGATATTGGTGAATTACAAAACAAAATTCTTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | TATGTTTTTGCCTCTGCACAGGGAAAACATATCACATaGGACATTATGGCTAACATGGCCAAGAACATGGAA | + |
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Preference number: 6 (lower is better) Translates to: YVFASAQGKHIT*DIMANMAKNME Trigger: TTCCATGTTCTTGGCCATGTTAGCCATAATGTCCAATGTGATATGTTTTCCCTGTGCAGAGGCAAAAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | ATTTTGTTTTGTAATTCACCAATATCAAAGGTGATGTaGGATGTGAACGCTCCCTGCAAATGGGCTTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: ILFCNSPISKVM*DVNAPCKWAFA Trigger: TGCGAAAGCCCATTTGCAGGGAGCGTTCACATCCAACATCACCTTTGATATTGGTGAATTACAAAACAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS GCA 72 bp | TTCGGTATTGTTTACCTGGAACTGGTCCTTCTTAGCTaGCAAAAAGACATAAGGATTAAACACACAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: FGIVYLELVLLS*QKDIRIKHTNC Trigger: ACAGTTTGTGTGTTTAATCCTTATGTCTTTTTGGCAGCTAAGAAGGACCAGTTCCAGGTAAACAATACCGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CCA 72 bp | TGTCTTTGTGGTGATACACAAAGGAAGTCCTTCCAGTaGAGCAGTATAATTAATGACATTATTCTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: CLCGDTQRKSFQ*SSIINDIILRV Trigger: GACTCTCAGAATAATGTCATTAATTATACTGCTCCACTGGAAGGACTTCCTTTGTGTATCACCACAAAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | CATGACTTTTTCATAGTGACTCAACCATGTTTGAGCTaGAATTTAAGACAGCTATGGCTGAGCGATGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HDFFIVTQPCLS*NLRQLWLSDVF Trigger: AAAGACATCGCTCAGCCATAGCTGTCTTAAATTCAAGCTCAAACATGGTTGAGTCACTATGAAAAAGTCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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| CDS CAA 72 bp | TGTAACATTAGACTGCATTGCTTACTATTGCTATTATaGGATAGTATCCTAATCCAGATGCTGCGATTCGTA | + |
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Preference number: 6 (lower is better) Translates to: CNIRLHCLLLLL*DSILIQMLRFV Trigger: TACGAATCGCAGCATCTGGATTAGGATACTATCCAATAATAGCAATAGTAAGCAATGCAGTCTAATGTTACA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658933.1 |
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