Pregenerated sensors for LINC02732 (Homo sapiens)
Ensembl gene IDs: ENSG00000254416Ensembl transcript IDs: ENST00000526605.6, ENST00000526703.2, ENST00000655432.1, ENST00000655839.1, ENST00000661010.1, ENST00000662858.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCGCACAGAAAAGTCTCCTTGTCCCCAGAAGGGCCCTCGGGAGTaGCTGGAGAGCAGATCCCGCCAGGTCACCACAGTGCTACACTTC | + |
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Preference number: 5 (lower is better) Translates to: GRTEKSPCPQKGPRE*LESRSRQVTTVLHF Trigger: GAAGTGTAGCACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS GCA 90 bp | GCCCTCGGGAGTGACTGGAGAGCAGATCCCGCCAGGTCACCACAGTaGTACACTTCAGGTTGGCTCTGTGCCCGGCTGAGGAAAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ALGSDWRADPARSPQ*YTSGWLCARLRKRN Trigger: ATTCCTTTTCCTCAGCCGGGCACAGAGCCAACCTGAAGTGTAGCACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACTCCCGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 90 bp | GCACAGAAAAGTCTCCTTGTCCCCAGAAGGGCCCTCGGGAGTGACTaGAGAGCAGATCCCGCCAGGTCACCACAGTGCTACACTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AQKSLLVPRRALGSD*RADPARSPQCYTSG Trigger: ACCTGAAGTGTAGCACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 90 bp | TATTGTACTCTTATCCCTCCTAGCCGACTCCGACCCTGTGTTCCATaGGGAGGCACACGCCTTCACTCCCTTCCCCCACCACAGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: YCTLIPPSRLRPCVP*GGTRLHSLPPPQAF Trigger: AAAAGCCTGTGGTGGGGGAAGGGAGTGAAGGCGTGTGCCTCCTCATGGAACACAGGGTCGGAGTCGGCTAGGAGGGATAAGAGTACAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000526605.6 ENST00000662858.1 |
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| CDS CCA 90 bp | GGGTTGCCACTGCTGACTCAGGTGGCCAGCTTTTATTCCCTTATTTaGCCCTGCCCGCATCCTACTGATTGGTCCATTTTACAGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GLPLLTQVASFYSLI*PCPHPTDWSILQSA Trigger: AGCACTCTGTAAAATGGACCAATCAGTAGGATGCGGGCAGGGCCAAATAAGGGAATAAAAGCTGGCCACCTGAGTCAGCAGTGGCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 90 bp | TTGGCTCTGTGCCCGGCTGAGGAAAAGGAATCTCTCTCCCCTCCTTaGAAACATGCCTCAGCATATTTATCTTCCGCCACCTCACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LALCPAEEKESLSPP*KHASAYLSSATSLF Trigger: GAACAGTGAGGTGGCGGAAGATAAATATGCTGAGGCATGTTTTCAAGGAGGGGAGAGAGATTCCTTTTCCTCAGCCGGGCACAGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 90 bp | GGTGGAGGTTGCAGTGAGTCTGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCTTGGTCTTGCTGACTTCAAGAATGAACCCATGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: GGGCSESVSGIGSFW*VLGLADFKNEPMNP Trigger: AGGGTTCATGGGTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAGAAGGAACCAATTCCGGACACAGACTCACTGCAACCTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 90 bp | GGAGGTGGAGGTTGCAGTGAGTCTGTGTCCGGAATTGGTTCCTTCTaGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAACCCATGAAC | + |
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Preference number: 5 (lower is better) Translates to: GGGGCSESVSGIGSF*WVLGLADFKNEPMN Trigger: GTTCATGGGTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAGAAGGAACCAATTCCGGACACAGACTCACTGCAACCTCCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 90 bp | TCTTTTAAGATCACAGATTCCATGTGCCGGGTCCATGCTGAGGGCTaGCAGCCTGTCTGTGTCACACAACCCTCTATTGTACTCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: SFKITDSMCRVHAEG*QPVCVTQPSIVLLS Trigger: GGATAAGAGTACAATAGAGGGTTGTGTGACACAGACAGGCTGCCAGCCCTCAGCATGGACCCGGCACATGGAATCTGTGATCTTAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 90 bp | AAAGGTGGTGTGGACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTaGAGAGTGAAAGAACAAAGCTTCCACAGCATGGAAGGGGACCCG | + |
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Preference number: 5 (lower is better) Translates to: KGGVDPKSEQQQDLL*RVKEQSFHSMEGDP Trigger: CGGGTCCCCTTCCATGCTGTGGAAGCTTTGTTCTTTCACTCTTCACAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCACACCACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 90 bp | CCTTCTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAACCCATaGACCCTCACAGTGAGTGTTACAGTTCTTAAAGATGGCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PSGGFLVLLTSRMNP*TLTVSVTVLKDGVS Trigger: GGACACGCCATCTTTAAGAACTGTAACACTCACTGTGAGGGTTCATGGGTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS GCA 90 bp | TTTTACAGAGTGCTGATTGGTCCGTTTTTACAGAGTGCTGATTGGTaGATTTACAAACCTCTAGCTAGACACATAGCACTGATTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: FYRVLIGPFLQSADW*IYKPLARHIALIGV Trigger: CACACCAATCAGTGCTATGTGTCTAGCTAGAGGTTTGTAAATGCACCAATCAGCACTCTGTAAAAACGGACCAATCAGCACTCTGTAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 90 bp | CCATTTTACAGAGTGCTGATTGGTCCGTTTTTACAGAGTGCTGATTaGTGCATTTACAAACCTCTAGCTAGACACATAGCACTGATTGGT | + |
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Preference number: 5 (lower is better) Translates to: PFYRVLIGPFLQSAD*CIYKPLARHIALIG Trigger: ACCAATCAGTGCTATGTGTCTAGCTAGAGGTTTGTAAATGCACCAATCAGCACTCTGTAAAAACGGACCAATCAGCACTCTGTAAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 72 bp | AGTCTCCTTGTCCCCAGAAGGGCCCTCGGGAGTGACTaGAGAGCAGATCCCGCCAGGTCACCACAGTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLLVPRRALGSD*RADPARSPQCY Trigger: GTAGCACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 72 bp | GAAAAGTCTCCTTGTCCCCAGAAGGGCCCTCGGGAGTaGCTGGAGAGCAGATCCCGCCAGGTCACCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: EKSPCPQKGPRE*LESRSRQVTTV Trigger: CACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS GCA 72 bp | AGTGACTGGAGAGCAGATCCCGCCAGGTCACCACAGTaGTACACTTCAGGTTGGCTCTGTGCCCGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SDWRADPARSPQ*YTSGWLCARLR Trigger: CCTCAGCCGGGCACAGAGCCAACCTGAAGTGTAGCACTGTGGTGACCTGGCGGGATCTGCTCTCCAGTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655432.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 90 bp | ACGTGCCACCACACTCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: TCHHTQINRPHRKVS*SPEGPSGVTGEQIP Trigger: CGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGAGTGTGGTGGCACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526703.2 |
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| CDS CAA 90 bp | AGCCTCGATCCTACTCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: SLDPTQINRPHRKVS*SPEGPSGVTGEQIP Trigger: CGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGAGTAGGATCGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661010.1 |
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| CDS CAA 72 bp | GTTGTAGTGTCCTCCAGAGGGGAACTCTTTAGGCCATaGAAAGGGCCAGCGGGTTGGTCCAGGGGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VVVSSRGELFRP*KGPAGWSRGPW Trigger: CCAAGGACCCCTGGACCAACCCGCTGGCCCTTTCAATGGCCTAAAGAGTTCCCCTCTGGAGGACACTACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 72 bp | CACACTCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: HTQINRPHRKVS*SPEGPSGVTGE Trigger: CTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526703.2 |
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| CDS CAA 72 bp | CGATCTCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSQINRPHRKVS*SPEGPSGVTGE Trigger: CTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGAGATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526605.6 ENST00000655432.1 |
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| CDS CAA 72 bp | CCTACTCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PTQINRPHRKVS*SPEGPSGVTGE Trigger: CTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661010.1 |
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| CDS TCA 72 bp | ACAGCATGGAAGGGGACCCGAGTGGGTTGCCACTGCTaGCTCAGGTGGCCAGCTTTTATTCCCTTATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: TAWKGTRVGCHC*LRWPAFIPLFG Trigger: GCCAAATAAGGGAATAAAAGCTGGCCACCTGAGTCAGCAGTGGCAACCCACTCGGGTCCCCTTCCATGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 72 bp | AGAACAAAGCTTCCACAGCATGGAAGGGGACCCGAGTaGGTTGCCACTGCTGACTCAGGTGGCCAGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RTKLPQHGRGPE*VATADSGGQLL Trigger: TAAAAGCTGGCCACCTGAGTCAGCAGTGGCAACCCACTCGGGTCCCCTTCCATGCTGTGGAAGCTTTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 72 bp | CTCTATCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LYQINRPHRKVS*SPEGPSGVTGE Trigger: CTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGATAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662858.1 |
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| CDS CAA 90 bp | AGACATCATCTCTATCAAATCAACAGGCCGCACAGAAAAGTCTCCTaGTCCCCAGAAGGGCCCTCGGGAGTGACTGGAGAGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: RHHLYQINRPHRKVS*SPEGPSGVTGEQIP Trigger: CGGGATCTGCTCTCCAGTCACTCCCGAGGGCCCTTCTGGGGACAAGGAGACTTTTCTGTGCGGCCTGTTGATTTGATAGAGATGATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662858.1 |
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| CDS CCA 72 bp | ATCACAGATTCCATGTGCCGGGTCCATGCTGAGGGCTaGCAGCCTGTCTGTGTCACACAACCCTCTATTGTA | + |
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Preference number: 6 (lower is better) Translates to: ITDSMCRVHAEG*QPVCVTQPSIV Trigger: TACAATAGAGGGTTGTGTGACACAGACAGGCTGCCAGCCCTCAGCATGGACCCGGCACATGGAATCTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000661010.1 ENST00000662858.1 |
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| CDS GCA 72 bp | TCTGTCGCCCAGTGCAGAGATGTGATCTCAGCTCACTaGAACCTCCGCCTCCAGAATTCAAGCAAATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVAQCRDVISAH*NLRLQNSSKSP Trigger: AGGAGATTTGCTTGAATTCTGGAGGCGGAGGTTGCAGTGAGCTGAGATCACATCTCTGCACTGGGCGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526703.2 |
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| CDS CAA 72 bp | TGTCCGAAATTTCTTCCTTCCAGTGGGTTCGTGGTCTaGCTGACTTCAGGAGTGAAGCCACAGACCTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: CPKFLPSSGFVV*LTSGVKPQTFA Trigger: TGCGAAGGTCTGTGGCTTCACTCCTGAAGTCAGCAAGACCACGAACCCACTGGAAGGAAGAAATTTCGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 72 bp | CTGCTGACTCAGGTGGCCAGCTTTTATTCCCTTATTTaGCCCTGCCCGCATCCTACTGATTGGTCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLTQVASFYSLI*PCPHPTDWSIL Trigger: TAAAATGGACCAATCAGTAGGATGCGGGCAGGGCCAAATAAGGGAATAAAAGCTGGCCACCTGAGTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 72 bp | TGCAGTGAGTCTGTGTCCGGAATTGGTTCCTTCTGGTaGGTTCTTGGTCTTGCTGACTTCAAGAATGAACCC | + |
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Preference number: 6 (lower is better) Translates to: CSESVSGIGSFW*VLGLADFKNEP Trigger: GGGTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAGAAGGAACCAATTCCGGACACAGACTCACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS GCA 72 bp | ACTCAGGTGGCCAGCTTTTATTCCCTTATTTGGCCCTaGCCGCATCCTACTGATTGGTCCATTTTACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: TQVASFYSLIWP*PHPTDWSILQS Trigger: ACTCTGTAAAATGGACCAATCAGTAGGATGCGGGCAGGGCCAAATAAGGGAATAAAAGCTGGCCACCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 72 bp | CAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAGTaGAAGAACAAAGCTTCCACAGCATGGAAGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QRVSSSKIYCEE*KNKASTAWKGT Trigger: GGTCCCCTTCCATGCTGTGGAAGCTTTGTTCTTTCACTCTTCACAATAAATCTTGCTGCTGCTCACTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 72 bp | AAGGCAGTGTCTCTTTTGGTTGCCAAAGGTAGTCACTaGACTCTTTTAAGATCACAGATTCCATGTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: KAVSLLVAKGSH*TLLRSQIPCAG Trigger: CCCGGCACATGGAATCTGTGATCTTAAAAGAGTCAAGTGACTACCTTTGGCAACCAAAAGAGACACTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000526703.2 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 72 bp | CTCATTTGGGGTTCCATTTGTAAGATCATCTGTAGCTaGATAGCCTCGATCTCAAATCAACAGGCCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: LIWGSICKIICS*IASISNQQAAQ Trigger: CTGTGCGGCCTGTTGATTTGAGATCGAGGCTATCAAGCTACAGATGATCTTACAAATGGAACCCCAAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526605.6 ENST00000655432.1 |
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| CDS CAA 72 bp | CTCATTTGGGGTTCCATTTGTAAGATCATCTGTAGCTaGATAGCCTCGATCCTACTCAAATCAACAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LIWGSICKIICS*IASILLKSTGR Trigger: GCGGCCTGTTGATTTGAGTAGGATCGAGGCTATCAAGCTACAGATGATCTTACAAATGGAACCCCAAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661010.1 |
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| CDS GCA 72 bp | GTGCTGATTGGTCCGTTTTTACAGAGTGCTGATTGGTaGATTTACAAACCTCTAGCTAGACACATAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: VLIGPFLQSADW*IYKPLARHIAL Trigger: CAGTGCTATGTGTCTAGCTAGAGGTTTGTAAATGCACCAATCAGCACTCTGTAAAAACGGACCAATCAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CAA 90 bp | TTAGTTGAGCTCATTTGGGGTTCCATTTGTAAGATCATCTGTAGCTaGATAGCCTCGATCTCAAATCAACAGGCCGCACAGAAAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVELIWGSICKIICS*IASISNQQAAQKSL Trigger: GAGACTTTTCTGTGCGGCCTGTTGATTTGAGATCGAGGCTATCAAGCTACAGATGATCTTACAAATGGAACCCCAAATGAGCTCAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526605.6 ENST00000655432.1 |
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| CDS CAA 90 bp | TTAGTTGAGCTCATTTGGGGTTCCATTTGTAAGATCATCTGTAGCTaGATAGCCTCGATCCTACTCAAATCAACAGGCCGCACAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LVELIWGSICKIICS*IASILLKSTGRTEK Trigger: CTTTTCTGTGCGGCCTGTTGATTTGAGTAGGATCGAGGCTATCAAGCTACAGATGATCTTACAAATGGAACCCCAAATGAGCTCAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661010.1 |
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| CDS TCA 72 bp | GGGTTCTTGGTCTTGCTGACTTCAAGAATGAACCCATaGACCCTCACAGTGAGTGTTACAGTTCTTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GFLVLLTSRMNP*TLTVSVTVLKD Trigger: ATCTTTAAGAACTGTAACACTCACTGTGAGGGTTCATGGGTTCATTCTTGAAGTCAGCAAGACCAAGAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS TCA 72 bp | AACACAGAGAGAGGTCAAGAGGTAAGCAGACATATGTaGGGATGCAAAACACTAGAGGCAACCTCACTTTTA | + |
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Preference number: 6 (lower is better) Translates to: NTERGQEVSRHM*GCKTLEATSLL Trigger: TAAAAGTGAGGTTGCCTCTAGTGTTTTGCATCCTCACATATGTCTGCTTACCTCTTGACCTCTCTCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000526605.6 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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| CDS CCA 72 bp | AGAGTGCTGATTGGTCCGTTTTTACAGAGTGCTGATTaGTGCATTTACAAACCTCTAGCTAGACACATAGCA | + |
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Preference number: 6 (lower is better) Translates to: RVLIGPFLQSAD*CIYKPLARHIA Trigger: TGCTATGTGTCTAGCTAGAGGTTTGTAAATGCACCAATCAGCACTCTGTAAAAACGGACCAATCAGCACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000526605.6 ENST00000655432.1 ENST00000655839.1 ENST00000661010.1 ENST00000662858.1 |
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