Pregenerated sensors for LINC02730 (Homo sapiens)
Ensembl gene IDs: ENSG00000255406Ensembl transcript IDs: ENST00000532272.1, ENST00000647888.1, ENST00000660021.1, ENST00000661634.1, ENST00000664263.1, ENST00000667347.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACTCTCCGGCCCCCACCCTGCATTCTCAGCTTCCTTAGCAACAGCTaGTGCTGTTGCCACCACCGCTGCAGCTTCGGCCCTGGCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: TLRPPPCILSFLSNS*CCCHHRCSFGPGPG Trigger: CCCCGGGCCAGGGCCGAAGCTGCAGCGGTGGTGGCAACAGCATCAGCTGTTGCTAAGGAAGCTGAGAATGCAGGGTGGGGGCCGGAGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS GCA 90 bp | GGCTACAAGGTCCCAGCTGCCTTCCAGCTCAGGCCAGCATGTCTCTaGCCTGTGTTCTCCCTGGATGGCCCCAGCTGGGTGGTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GYKVPAAFQLRPACL*PVFSLDGPSWVVLS Trigger: GCTCAGAACCACCCAGCTGGGGCCATCCAGGGAGAACACAGGGCAGAGACATGCTGGCCTGAGCTGGAAGGCAGCTGGGACCTTGTAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 90 bp | GGGGAAGCTGTCCAGACCGAGATGAATGGCTCCGAAGCCTGCTGTTaGCATGGCAGCCAGCTGGGAACACCGTTTCCAGGGCCCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GEAVQTEMNGSEACC*HGSQLGTPFPGPKV Trigger: CACCTTGGGCCCTGGAAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTCTGGACAGCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS GCA 90 bp | CGAGTAGGGGAAGCTGTCCAGACCGAGATGAATGGCTCCGAAGCCTaGTGTTGCCATGGCAGCCAGCTGGGAACACCGTTTCCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RVGEAVQTEMNGSEA*CCHGSQLGTPFPGP Trigger: GGGCCCTGGAAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTCTGGACAGCTTCCCCTACTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS CCA 90 bp | AGCTGTCCAGACCGAGATGAATGGCTCCGAAGCCTGCTGTTGCCATaGCAGCCAGCTGGGAACACCGTTTCCAGGGCCCAAGGTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SCPDRDEWLRSLLLP*QPAGNTVSRAQGAQ Trigger: CTGAGCACCTTGGGCCCTGGAAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTCTGGACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS GCA 90 bp | CTTGATTCCCAAAGCGCTGCGGGCCCAGGAGTCACATCAGCCCTGTaGCATCAGAGCAGCCTTGAAGCAGAGCAGCTCACTGATGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LDSQSAAGPGVTSAL*HQSSLEAEQLTDGQ Trigger: CTGCCCATCAGTGAGCTGCTCTGCTTCAAGGCTGCTCTGATGGCACAGGGCTGATGTGACTCCTGGGCCCGCAGCGCTTTGGGAATCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CCA 90 bp | CTTCCAGCTCAGGCCAGCATGTCTCTGCCCTGTGTTCTCCCTGGATaGCCCCAGCTGGGTGGTTCTGAGCAGACCGGTCCAGGTTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LPAQASMSLPCVLPG*PQLGGSEQTGPGFY Trigger: ATAAAAACCTGGACCGGTCTGCTCAGAACCACCCAGCTGGGGCCATCCAGGGAGAACACAGGGCAGAGACATGCTGGCCTGAGCTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS TCA 90 bp | TCTCTGGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTTaGGTCCTGCAGTGTGTGGAGGCCGGTGGAGTAGCTCTGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SLGKGFDLEASISSS*VLQCVEAGGVALLH Trigger: GTGAAGCAGAGCTACTCCACCGGCCTCCACACACTGCAGGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS TCA 90 bp | TGCCTGTTTTGGCAGCAGAGGGTCCACTGTGTTCAGTGTGTTCTTTaGGGGACCTCTTCCTTATGGGAGCTTCTTGGGAGTCACCACCAG | + |
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Preference number: 5 (lower is better) Translates to: CLFWQQRVHCVQCVL*GTSSLWELLGSHHQ Trigger: CTGGTGGTGACTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACACACTGAACACAGTGGACCCTCTGCTGCCAAAACAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS GCA 90 bp | AGCTCCACTGCCCCACGCCCTCCATATGCTACGAGTGCCATCGTTTaGTTGTACAGACACTGCTGGCATGTTACAACCCTTGCATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: SSTAPRPPYATSAIV*LYRHCWHVTTLALR Trigger: TCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCGTGGGGCAGTGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS GCA 90 bp | AGTCCTGCAGTGTGTGGAGGCCGGTGGAGTAGCTCTGCTTCACTCTaGAGGTTTCTCTTGTCAGATGACGTCATTCTCACAGGCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: SPAVCGGRWSSSASL*RFLLSDDVILTGYK Trigger: CTTGTAGCCTGTGAGAATGACGTCATCTGACAAGAGAAACCTGCAGAGTGAAGCAGAGCTACTCCACCGGCCTCCACACACTGCAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CCA 90 bp | TTCCACTTTGTGTCTTCAGGTCTAACAGAGCAGGGAGAGGAGAGGTaGGTTTCGGCTTCATCAGTAGTCAGCCTCTCAAAGGGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: FHFVSSGLTEQGEER*VSASSVVSLSKGSR Trigger: CCTGCTGCCCTTTGAGAGGCTGACTACTGATGAAGCCGAAACCCACCTCTCCTCTCCCTGCTCTGTTAGACCTGAAGACACAAAGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CCA 90 bp | AGCCTCCATTTCCTCATCTTGAGTCCTGCAGTGTGTGGAGGCCGGTaGAGTAGCTCTGCTTCACTCTGCAGGTTTCTCTTGTCAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: SLHFLILSPAVCGGR*SSSASLCRFLLSDD Trigger: GTCATCTGACAAGAGAAACCTGCAGAGTGAAGCAGAGCTACTCCACCGGCCTCCACACACTGCAGGACTCAAGATGAGGAAATGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS TCA 90 bp | GTCTCTGCCCTGTGTTCTCCCTGGATGGCCCCAGCTGGGTGGTTCTaGGCAGACCGGTCCAGGTTTTTATTATTATTCACCAGGTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: VSALCSPWMAPAGWF*ADRSRFLLLFTRLN Trigger: GTTTAACCTGGTGAATAATAATAAAAACCTGGACCGGTCTGCTCAGAACCACCCAGCTGGGGCCATCCAGGGAGAACACAGGGCAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 90 bp | GTGGGCCCTTCTGCTGTCTCTGGCACAGCAGGAAGAGATGGGATTTaGAGGCAGACAGGTGCAAGTTCAAATCTCAGCTTCATCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: VGPSAVSGTAGRDGI*RQTGASSNLSFITF Trigger: GAAAGTGATGAAGCTGAGATTTGAACTTGCACCTGTCTGCCTGCAAATCCCATCTCTTCCTGCTGTGCCAGAGACAGCAGAAGGGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS GCA 90 bp | CGCCCTCCATATGCTACGAGTGCCATCGTTTGCTTGTACAGACACTaGTGGCATGTTACAACCCTTGCATTGAGACTCTTGTGTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RPPYATSAIVCLYRH*WHVTTLALRLLCWG Trigger: ACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CCA 90 bp | AGACACTGCTGGCATGTTACAACCCTTGCATTGAGACTCTTGTGTTaGGGTATGGAAATGCAGGAGCCAGGTTGGCACATCCAGGTGCAA | + |
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Preference number: 5 (lower is better) Translates to: RHCWHVTTLALRLLC*GMEMQEPGWHIQVQ Trigger: TTGCACCTGGATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS GCA 90 bp | AGGCAGACAGGTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTaGATGTCTCTGGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: RQTGASSNLSFITFC*MSLGKGFDLEASIS Trigger: GGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCACCTGTCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS GCA 90 bp | TGCAGGCAGACAGGTGCAAGTTCAAATCTCAGCTTCATCACTTTCTaGTGCATGTCTCTGGGCAAGGGGTTTGACCTTGAAGCCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: CRQTGASSNLSFITF*CMSLGKGFDLEASI Trigger: AATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCACCTGTCTGCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 90 bp | CCTCCATATGCTACGAGTGCCATCGTTTGCTTGTACAGACACTGCTaGCATGTTACAACCCTTGCATTGAGACTCTTGTGTTGGGGTATG | + |
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Preference number: 5 (lower is better) Translates to: PPYATSAIVCLYRHC*HVTTLALRLLCWGM Trigger: CATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CCA 90 bp | GTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTaGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VQVQISASSLSAACL*ARGLTLKPPFPHLG Trigger: TCCCAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660021.1 |
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| CDS CCA 90 bp | GTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTaGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VQVQISASSLSAACL*ARGLTLKPPFPHLE Trigger: CTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CCA 90 bp | GTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTaGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: VQVQISASSLSAACL*ARGLTLKPPFPHLL Trigger: CAAAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000532272.1 ENST00000664263.1 |
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| CDS CCA 90 bp | CCTTATGGGAGCTTCTTGGGAGTCACCACCAGGCACAGAGAGCTCTaGGTTGCAGATGAGATCCTTCTGTTATCTTCATATGTTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: PYGSFLGVTTRHREL*VADEILLLSSYVSK Trigger: TTTAGAAACATATGAAGATAACAGAAGGATCTCATCTGCAACCCAGAGCTCTCTGTGCCTGGTGGTGACTCCCAAGAAGCTCCCATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 90 bp | GTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTaGGCAAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: VQVQISASSLSAACL*ARGLTLKPPFPHLF Trigger: AAAAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667347.1 |
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| CDS GCA 72 bp | GTCCAGACCGAGATGAATGGCTCCGAAGCCTGCTGTTaGCATGGCAGCCAGCTGGGAACACCGTTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VQTEMNGSEACC*HGSQLGTPFPG Trigger: CCCTGGAAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS GCA 72 bp | CAAAGCGCTGCGGGCCCAGGAGTCACATCAGCCCTGTaGCATCAGAGCAGCCTTGAAGCAGAGCAGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: QSAAGPGVTSAL*HQSSLEAEQLT Trigger: AGTGAGCTGCTCTGCTTCAAGGCTGCTCTGATGGCACAGGGCTGATGTGACTCCTGGGCCCGCAGCGCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CCA 72 bp | GGTTCTAAAGAAAGGCGGCTGCTTGAAGGACAGGTGTaGCAGGAAGTGCGGCTAGGGAGGGGCCCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: GSKERRLLEGQV*QEVRLGRGPTL Trigger: CAGTGTGGGGCCCCTCCCTAGCCGCACTTCCTGCCACACCTGTCCTTCAAGCAGCCGCCTTTCTTTAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 72 bp | GACCGAGATGAATGGCTCCGAAGCCTGCTGTTGCCATaGCAGCCAGCTGGGAACACCGTTTCCAGGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: DRDEWLRSLLLP*QPAGNTVSRAQ Trigger: TTGGGCCCTGGAAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664263.1 |
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| CDS CAA 90 bp | CTGCGGGCCCAGGAGTCACATCAGCCCTGTGCCATCAGAGCAGCCTaGAAGCAGAGCAGCTCACTGATGGGCAGATTTTTGATGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRAQESHQPCAIRAA*KQSSSLMGRFLMPS Trigger: GGAAGGCATCAAAAATCTGCCCATCAGTGAGCTGCTCTGCTTCAAGGCTGCTCTGATGGCACAGGGCTGATGTGACTCCTGGGCCCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | GAAGCTGTCCAGACCGAGATGAATGGCTCCGAAGCCTaGTGTTGCCATGGCAGCCAGCTGGGAACACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: EAVQTEMNGSEA*CCHGSQLGTPF Trigger: AAACGGTGTTCCCAGCTGGCTGCCATGGCAACAGCAGGCTTCGGAGCCATTCATCTCGGTCTGGACAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647888.1 ENST00000664263.1 |
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| CDS GCA 72 bp | GGAGAGATCACCTGTGCTCAAGGGGCTAAAGGGAGCTaGATTTACTTGGGGGCAGAGGCTGTGGGCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GEITCAQGAKGS*IYLGAEAVGTQ Trigger: CTGAGTGCCCACAGCCTCTGCCCCCAAGTAAATGCAGCTCCCTTTAGCCCCTTGAGCACAGGTGATCTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 72 bp | AGTGTCAGCAGAACCCGCCAACCTCTAAGATCAGGCTaGATTCCCAAAGCGCTGCGGGCCCAGGAGTCACAT | + |
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Preference number: 6 (lower is better) Translates to: SVSRTRQPLRSG*IPKALRAQESH Trigger: ATGTGACTCCTGGGCCCGCAGCGCTTTGGGAATCAAGCCTGATCTTAGAGGTTGGCGGGTTCTGCTGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 90 bp | AGGTTAAACAGTGTCAGCAGAACCCGCCAACCTCTAAGATCAGGCTaGATTCCCAAAGCGCTGCGGGCCCAGGAGTCACATCAGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RLNSVSRTRQPLRSG*IPKALRAQESHQPC Trigger: ACAGGGCTGATGTGACTCCTGGGCCCGCAGCGCTTTGGGAATCAAGCCTGATCTTAGAGGTTGGCGGGTTCTGCTGACACTGTTTAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 90 bp | TGTGGAGGCCGGTGGAGTAGCTCTGCTTCACTCTGCAGGTTTCTCTaGTCAGATGACGTCATTCTCACAGGCTACAAGGTCCCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CGGRWSSSASLCRFL*SDDVILTGYKVPAA Trigger: GGCAGCTGGGACCTTGTAGCCTGTGAGAATGACGTCATCTGACAAGAGAAACCTGCAGAGTGAAGCAGAGCTACTCCACCGGCCTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | GCTAATAGGCCACATCTACACAGCCGTGGGCCCTTCTaGTGTCTCTGGCACAGCAGGAAGAGATGGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: ANRPHLHSRGPF*CLWHSRKRWDL Trigger: CAAATCCCATCTCTTCCTGCTGTGCCAGAGACAGCAGAAGGGCCCACGGCTGTGTAGATGTGGCCTATTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 72 bp | ACTCTTGTGTTGGGGTATGGAAATGCAGGAGCCAGGTaGGCACATCCAGGTGCAAAGCTGAGGTCCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TLVLGYGNAGAR*AHPGAKLRSPQ Trigger: CTGTGGGGACCTCAGCTTTGCACCTGGATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | TGCATTGAGACTCTTGTGTTGGGGTATGGAAATGCAGGAGCCAGGTaGGCACATCCAGGTGCAAAGCTGAGGTCCCCACAGGAGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: CIETLVLGYGNAGAR*AHPGAKLRSPQERA Trigger: TGCTCTCTCCTGTGGGGACCTCAGCTTTGCACCTGGATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | CAGCTCCACTGCCCCACGCCCTCCATATGCTACGAGTGCCATCGTTaGCTTGTACAGACACTGCTGGCATGTTACAACCCTTGCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: QLHCPTPSICYECHR*LVQTLLACYNPCIE Trigger: CTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCGTGGGGCAGTGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS TCA 72 bp | AAGGGGTTTGACCTTGAAGCCTCCATTTCCTCATCTTaGGTCCTGCAGTGTGTGGAGGCCGGTGGAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KGFDLEASISSS*VLQCVEAGGVA Trigger: AGCTACTCCACCGGCCTCCACACACTGCAGGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | GCCCCACGCCCTCCATATGCTACGAGTGCCATCGTTTaGTTGTACAGACACTGCTGGCATGTTACAACCCTT | + |
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Preference number: 6 (lower is better) Translates to: APRPPYATSAIV*LYRHCWHVTTL Trigger: AAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CCA 72 bp | TGTTCTTTGAGGGACCTCTTCCTTATGGGAGCTTCTTaGGAGTCACCACCAGGCACAGAGAGCTCTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: CSLRDLFLMGAS*ESPPGTESSGL Trigger: CAACCCAGAGCTCTCTGTGCCTGGTGGTGACTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 72 bp | TTCCTCATCTTGAGTCCTGCAGTGTGTGGAGGCCGGTaGAGTAGCTCTGCTTCACTCTGCAGGTTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FLILSPAVCGGR*SSSASLCRFLL Trigger: CAAGAGAAACCTGCAGAGTGAAGCAGAGCTACTCCACCGGCCTCCACACACTGCAGGACTCAAGATGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 72 bp | GTGTTCTTTGAGGGACCTCTTCCTTATGGGAGCTTCTaGGGAGTCACCACCAGGCACAGAGAGCTCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VFFEGPLPYGSF*GVTTRHRELWV Trigger: AACCCAGAGCTCTCTGTGCCTGGTGGTGACTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 90 bp | CTGCCTGTTTTGGCAGCAGAGGGTCCACTGTGTTCAGTGTGTTCTTaGAGGGACCTCTTCCTTATGGGAGCTTCTTGGGAGTCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: LPVLAAEGPLCSVCS*RDLFLMGASWESPP Trigger: TGGTGGTGACTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACACACTGAACACAGTGGACCCTCTGCTGCCAAAACAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 90 bp | TCCACTGCCCCACGCCCTCCATATGCTACGAGTGCCATCGTTTGCTaGTACAGACACTGCTGGCATGTTACAACCCTTGCATTGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: STAPRPPYATSAIVC*YRHCWHVTTLALRL Trigger: GAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCGTGGGGCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS TCA 72 bp | TGGCAGCAGAGGGTCCACTGTGTTCAGTGTGTTCTTTaGGGGACCTCTTCCTTATGGGAGCTTCTTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: WQQRVHCVQCVL*GTSSLWELLGS Trigger: ACTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACACACTGAACACAGTGGACCCTCTGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS TCA 72 bp | CTGTGTTCTCCCTGGATGGCCCCAGCTGGGTGGTTCTaGGCAGACCGGTCCAGGTTTTTATTATTATTCACC | + |
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Preference number: 6 (lower is better) Translates to: LCSPWMAPAGWF*ADRSRFLLLFT Trigger: GGTGAATAATAATAAAAACCTGGACCGGTCTGCTCAGAACCACCCAGCTGGGGCCATCCAGGGAGAACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | GTGTGTGGAGGCCGGTGGAGTAGCTCTGCTTCACTCTaGAGGTTTCTCTTGTCAGATGACGTCATTCTCACA | + |
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Preference number: 6 (lower is better) Translates to: VCGGRWSSSASL*RFLLSDDVILT Trigger: TGTGAGAATGACGTCATCTGACAAGAGAAACCTGCAGAGTGAAGCAGAGCTACTCCACCGGCCTCCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 72 bp | TTGGCAGCAGAGGGTCCACTGTGTTCAGTGTGTTCTTaGAGGGACCTCTTCCTTATGGGAGCTTCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LAAEGPLCSVCS*RDLFLMGASWE Trigger: CTCCCAAGAAGCTCCCATAAGGAAGAGGTCCCTCAAAGAACACACTGAACACAGTGGACCCTCTGCTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 72 bp | CCACGCCCTCCATATGCTACGAGTGCCATCGTTTGCTaGTACAGACACTGCTGGCATGTTACAACCCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PRPPYATSAIVC*YRHCWHVTTLA Trigger: TGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATATGGAGGGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | CGTGGGCCCTTCTGCTGTCTCTGGCACAGCAGGAAGAGATGGGATTaGCAGGCAGACAGGTGCAAGTTCAAATCTCAGCTTCATCACTTT | + |
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Preference number: 6 (lower is better) Translates to: RGPFCCLWHSRKRWD*QADRCKFKSQLHHF Trigger: AAAGTGATGAAGCTGAGATTTGAACTTGCACCTGTCTGCCTGCAAATCCCATCTCTTCCTGCTGTGCCAGAGACAGCAGAAGGGCCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 90 bp | CAGACACTGCTGGCATGTTACAACCCTTGCATTGAGACTCTTGTGTaGGGGTATGGAAATGCAGGAGCCAGGTTGGCACATCCAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: QTLLACYNPCIETLV*GYGNAGARLAHPGA Trigger: TGCACCTGGATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | GCTTCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTTGACCTaGAAGCCTCCATTTCCTCATCTTGAGTCCTGCAGTGTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSLSAACLWARGLT*KPPFPHLESCSVWR Trigger: CCTCCACACACTGCAGGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | TCTGCTGTCTCTGGCACAGCAGGAAGAGATGGGATTTaGAGGCAGACAGGTGCAAGTTCAAATCTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAVSGTAGRDGI*RQTGASSNLSF Trigger: GAAGCTGAGATTTGAACTTGCACCTGTCTGCCTGCAAATCCCATCTCTTCCTGCTGTGCCAGAGACAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 72 bp | CTAAGTGCTAGTTCCCATTCTTTCCATTATTCCAGCTaGGTCCAGTCACCCCCGTTTGCCCTCCAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSASSHSFHYSS*VQSPPFALQAS Trigger: AGAAGCTTGGAGGGCAAACGGGGGTGACTGGACCCAGCTGGAATAATGGAAAGAATGGGAACTAGCACTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 72 bp | CACTGCTGGCATGTTACAACCCTTGCATTGAGACTCTaGTGTTGGGGTATGGAAATGCAGGAGCCAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HCWHVTTLALRL*CWGMEMQEPGW Trigger: CCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 72 bp | CTTTCTGCTGCATGTCTCTGGGCAAGGGGTTTGACCTaGAAGCCTCCATTTCCTCATCTTGAGTCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSAACLWARGLT*KPPFPHLESCS Trigger: ACTGCAGGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 90 bp | TTGTACAGACACTGCTGGCATGTTACAACCCTTGCATTGAGACTCTaGTGTTGGGGTATGGAAATGCAGGAGCCAGGTTGGCACATCCAG | + |
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Preference number: 6 (lower is better) Translates to: LYRHCWHVTTLALRL*CWGMEMQEPGWHIQ Trigger: CTGGATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | ATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTTGAGTCCTGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ISASSLSAACLWARG*TLKPPFPHLESCSV Trigger: CACACTGCAGGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS GCA 72 bp | GGTGCAAGTTCAAATCTCAGCTTCATCACTTTCTGCTaGATGTCTCTGGGCAAGGGGTTTGACCTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GASSNLSFITFC*MSLGKGFDLEA Trigger: GGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGATTTGAACTTGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS GCA 72 bp | GTTACCACATCTAGAAGTGACCAAGTGTCACCTGGCTaGTGGCTTACCTGGGATGTAACCAGTACTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VTTSRSDQVSPG*WLTWDVTSTSP Trigger: AGGAGAAGTACTGGTTACATCCCAGGTAAGCCAGCAGCCAGGTGACACTTGGTCACTTCTAGATGTGGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667347.1 |
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| CDS CCA 72 bp | TGGCATGTTACAACCCTTGCATTGAGACTCTTGTGTTaGGGTATGGAAATGCAGGAGCCAGGTTGGCACATC | + |
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Preference number: 6 (lower is better) Translates to: WHVTTLALRLLC*GMEMQEPGWHI Trigger: GATGTGCCAACCTGGCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CCA 72 bp | ACCACATCTAGAAGTGACCAAGTGTCACCTGGCTGCTaGCTTACCTGGGATGTAACCAGTACTTCTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TTSRSDQVSPGC*LTWDVTSTSPF Trigger: GAAAGGAGAAGTACTGGTTACATCCCAGGTAAGCCAGCAGCCAGGTGACACTTGGTCACTTCTAGATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667347.1 |
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| CDS CAA 72 bp | TCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSLSAACLWARG*TLKPPFPHLLP Trigger: GGGCAAAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000532272.1 ENST00000664263.1 |
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| CDS CAA 72 bp | TTCTGCTGTCTCTGGCACAGCAGGAAGAGATGGGATTaGCAGGCAGACAGGTGCAAGTTCAAATCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: FCCLWHSRKRWD*QADRCKFKSQL Trigger: AAGCTGAGATTTGAACTTGCACCTGTCTGCCTGCAAATCCCATCTCTTCCTGCTGTGCCAGAGACAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000532272.1 ENST00000647888.1 ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CAA 72 bp | TCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLSAACLWARG*TLKPPFPHLES Trigger: GGACTCAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661634.1 |
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| CDS CAA 90 bp | ATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTGGGATGTAACCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: ISASSLSAACLWARG*TLKPPFPHLGCNQY Trigger: GTACTGGTTACATCCCAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660021.1 |
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| CDS TCA 72 bp | TGTACAGACACTGCTGGCATGTTACAACCCTTGCATTaGGACTCTTGTGTTGGGGTATGGAAATGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CTDTAGMLQPLH*DSCVGVWKCRS Trigger: GCTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CCA 72 bp | GCTACGAGTGCCATCGTTTGCTTGTACAGACACTGCTaGCATGTTACAACCCTTGCATTGAGACTCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ATSAIVCLYRHC*HVTTLALRLLC Trigger: ACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 90 bp | ATCTCAGCTTCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTTTTTACGCACCCTATC | + |
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Preference number: 6 (lower is better) Translates to: ISASSLSAACLWARG*TLKPPFPHLFTHPI Trigger: GATAGGGTGCGTAAAAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGAAGCTGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667347.1 |
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| CDS GCA 72 bp | TATGCTACGAGTGCCATCGTTTGCTTGTACAGACACTaGTGGCATGTTACAACCCTTGCATTGAGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: YATSAIVCLYRH*WHVTTLALRLL Trigger: CAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAAGCAAACGATGGCACTCGTAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 72 bp | TTGTACAGACACTGCTGGCATGTTACAACCCTTGCATaGAGACTCTTGTGTTGGGGTATGGAAATGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LYRHCWHVTTLA*RLLCWGMEMQE Trigger: CTCCTGCATTTCCATACCCCAACACAAGAGTCTCAATGCAAGGGTTGTAACATGCCAGCAGTGTCTGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647888.1 |
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| CDS CAA 72 bp | TCATCACTTTCTGCTGCATGTCTCTGGGCAAGGGGTTaGACCTTGAAGCCTCCATTTCCTCATCTTTTTACG | + |
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Preference number: 6 (lower is better) Translates to: SSLSAACLWARG*TLKPPFPHLFT Trigger: CGTAAAAAGATGAGGAAATGGAGGCTTCAAGGTCAAACCCCTTGCCCAGAGACATGCAGCAGAAAGTGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667347.1 |
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| CDS CAA 72 bp | ATGGGGCAAAAATACTATCAACCCAACAGAGCTATTTaGAAGGCTACACAGATAAATGCACCAGAATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: MGQKYYQPNRAI*KATQINAPEFL Trigger: CAGAAATTCTGGTGCATTTATCTGTGTAGCCTTCAAAATAGCTCTGTTGGGTTGATAGTATTTTTGCCCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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| CDS CCA 72 bp | CTAACCTCTCTGAACTCAGTTTCTTATACCATAACATaGGGCAAAAATACTATCAACCCAACAGAGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: LTSLNSVSYTIT*GKNTINPTELF Trigger: AAATAGCTCTGTTGGGTTGATAGTATTTTTGCCCCATGTTATGGTATAAGAAACTGAGTTCAGAGAGGTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000660021.1 ENST00000661634.1 ENST00000664263.1 ENST00000667347.1 |
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