Pregenerated sensors for LINC02729 (Homo sapiens)

Ensembl gene IDs: ENSG00000255335

Ensembl transcript IDs: ENST00000529781.1, ENST00000658252.1, ENST00000667234.1, ENST00000670639.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ATTCGAACTGAAGTTTGGCTGCCTGGAGGGGAAGGGAGTCTTGCCTaGGTATGTCAGCAGGCGGAGGCTGTGAATAAGTGTGGTGGGGGA	+
Preference number: 5 (lower is better) Translates to: IRTEVWLPGGEGSLA*VCQQAEAVNKCGGG Trigger: TCCCCCACCACACTTATTCACAGCCTCCGCCTGCTGACATACCCAGGCAAGACTCCCTTCCCCTCCAGGCAGCCAAACTTCAGTTCGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000529781.1 ENST00000658252.1 ENST00000667234.1 ENST00000670639.1
CDS GCA 90 bp	TTTCAGATAAGTAAAACTGTGGTTCAAAGAGGCCCTGGGACCACCTaGGAAGATCCTGGGATTCATCAGGGGTCTGGTAAGAGCCAGAAG	+
Preference number: 5 (lower is better) Translates to: FQISKTVVQRGPGTT*EDPGIHQGSGKSQK Trigger: CTTCTGGCTCTTACCAGACCCCTGATGAATCCCAGGATCTTCGCAGGTGGTCCCAGGGCCTCTTTGAACCACAGTTTTACTTATCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000529781.1 ENST00000658252.1 ENST00000667234.1 ENST00000670639.1
CDS CCA 72 bp	GACTCCAGCGGGCCTGAGGACAGAGATGGAGGCCGGTaGGCAAAGCGGGGAGGATCTGGGCCGCGGCCGTGG	+
Preference number: 6 (lower is better) Translates to: DSSGPEDRDGGR*AKRGGSGPRPW Trigger: CCACGGCCGCGGCCCAGATCCTCCCCGCTTTGCCCACCGGCCTCCATCTCTGTCCTCAGGCCCGCTGGAGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658252.1
CDS CCA 72 bp	CAGAGATGGAGGCCGGTGGGCAAAGCGGGGAGGATCTaGGCCGCGGCCGTGGGGGTGCTTATAGACGAGCCC	+
Preference number: 6 (lower is better) Translates to: QRWRPVGKAGRI*AAAVGVLIDEP Trigger: GGGCTCGTCTATAAGCACCCCCACGGCCGCGGCCCAGATCCTCCCCGCTTTGCCCACCGGCCTCCATCTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658252.1
CDS CCA 72 bp	GAAGTTTGGCTGCCTGGAGGGGAAGGGAGTCTTGCCTaGGTATGTCAGCAGGCGGAGGCTGTGAATAAGTGT	+
Preference number: 6 (lower is better) Translates to: EVWLPGGEGSLA*VCQQAEAVNKC Trigger: ACACTTATTCACAGCCTCCGCCTGCTGACATACCCAGGCAAGACTCCCTTCCCCTCCAGGCAGCCAAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000529781.1 ENST00000658252.1 ENST00000667234.1 ENST00000670639.1
CDS GCA 72 bp	AGTAAAACTGTGGTTCAAAGAGGCCCTGGGACCACCTaGGAAGATCCTGGGATTCATCAGGGGTCTGGTAAG	+
Preference number: 6 (lower is better) Translates to: SKTVVQRGPGTT*EDPGIHQGSGK Trigger: CTTACCAGACCCCTGATGAATCCCAGGATCTTCGCAGGTGGTCCCAGGGCCTCTTTGAACCACAGTTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000529781.1 ENST00000658252.1 ENST00000667234.1 ENST00000670639.1

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