RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02727 (Homo sapiens)

Ensembl gene IDs: ENSG00000254823

Ensembl transcript IDs: ENST00000527533.1, ENST00000527774.1, ENST00000657363.1, ENST00000657507.1, ENST00000664077.1

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTGGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCATaGGCTGTGAGTTGGGCTGTCTTTGATGACTTCTTGGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: LACHREVRGSTQGPS*AVSWAVFDDFLVRV
Trigger: CACACGCACCAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657363.1
ENST00000657507.1
CDS CCA 90 bp CAACGGCATCATTCTGACACTCCATGGGGTCTTCCCATGGCCATTTaGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: QRHHSDTPWGLPMAI*LAIERSEAVLRVPH
Trigger: ATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS TCA 90 bp CATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCTGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: HWHWSQTDSRPSFAV*LASLGLFPYAAEAG
Trigger: TCCTGCCTCAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527774.1
ENST00000664077.1
CDS TCA 90 bp AGGGACGAGCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTTaGCTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTG +
Preference number: 5 (lower is better)
Translates to: RDELCHAVDFRRGFF*LWPTMENIQYPEPL
Trigger: CAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS GCA 90 bp TTCCCAAGAGCGAGTGACAGTGTCGTTCAGGGACGAGCTGTGCCATaGTGTAGATTTCCGGCGAGGCTTCTTTTGACTGTGGCCAACAAT +
Preference number: 5 (lower is better)
Translates to: FPRASDSVVQGRAVP*CRFPARLLLTVANN
Trigger: ATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTGAACGACACTGTCACTCGCTCTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 90 bp GAATCCATGACCGGTCTAAAATCCTTGCCCTCAACGGCATCATTCTaGCACTCCATGGGGTCTTCCCATGGCCATTTGGCTTGCCATAGA +
Preference number: 5 (lower is better)
Translates to: ESMTGLKSLPSTASF*HSMGSSHGHLACHR
Trigger: TCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATTTTAGACCGGTCATGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527533.1
ENST00000527774.1
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS TCA 90 bp CATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: HWHWSQTDSRPSFAV*LASLGLFPYKEPGS
Trigger: TGAGCCTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527533.1
ENST00000657363.1
CDS GCA 90 bp TTTGACTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTaGCAAATTTCACACTTGGGGTTTAGCCCAGTTTCACGGACGTCC +
Preference number: 5 (lower is better)
Translates to: FDCGQQWRTFSTQNP*QISHLGFSPVSRTS
Trigger: GGACGTCCGTGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 90 bp GGATCATTTGATGTTAGGAGTTTAAGACCAGCCCAGCCAACATGGTaGAATGCGGCCTCTACTAACAATACAAAAATAAGCTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: GSFDVRSLRPAQPTW*NAASTNNTKISWAW
Trigger: CCACGCCCAGCTTATTTTTGTATTGTTAGTAGAGGCCGCATTTCACCATGTTGGCTGGGCTGGTCTTAAACTCCTAACATCAAATGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657507.1
CDS GCA 90 bp GCTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTTGATATaGAGTAGACTTGCTACTTCTATGACTAAGACATCATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: AEHLQRARLSATLLI*SRLATSMTKTSSPF
Trigger: AAATGGAGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527774.1
CDS GCA 90 bp ACTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTTGATATaGAGTAGACTTGCTACTTCTATGACTAAGACATCATCTCCATTT +
Preference number: 5 (lower is better)
Translates to: TEHLQRARLSATLLI*SRLATSMTKTSSPF
Trigger: AAATGGAGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657507.1
ENST00000664077.1
CDS GCA 72 bp TCCCCAGCACTGCGCTGCAGCAGCCCCTTTGGCTTCTaGTGTCTCTTCTCCATGATCCCTGGCTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: SPALRCSSPFGF*CLFSMIPGLFG
Trigger: TCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGGCTGCTGCAGCGCAGTGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 72 bp GCAGCAGCCCCTTTGGCTTCTGCTGTCTCTTCTCCATaGTCCCTGGCTTGTTTGGAGTTCCTGCCATTCCCC +
Preference number: 6 (lower is better)
Translates to: AAAPLASAVSSP*SLACLEFLPFP
Trigger: GGGGAATGGCAGGAACTCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS CCA 72 bp CCCCTTTGGCTTCTGCTGTCTCTTCTCCATGATCCCTaGCTTGTTTGGAGTTCCTGCCATTCCCCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: PLWLLLSLLHDP*LVWSSCHSPPS
Trigger: GGAGGGAGGGGAATGGCAGGAACTCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 72 bp AGGTCAGAGGCAGTACTCAGGGTCCCTCATGGGCTGTaGGTTGGGCTGTCTTTGATGACTTCTTGGTGCGTG +
Preference number: 6 (lower is better)
Translates to: RSEAVLRVPHGL*VGLSLMTSWCV
Trigger: CACGCACCAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657363.1
ENST00000657507.1
CDS GCA 72 bp GCGAGTGACAGTGTCGTTCAGGGACGAGCTGTGCCATaGTGTAGATTTCCGGCGAGGCTTCTTTTGACTGTG +
Preference number: 6 (lower is better)
Translates to: ASDSVVQGRAVP*CRFPARLLLTV
Trigger: CACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTGAACGACACTGTCACTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS CCA 72 bp CATTCTGACACTCCATGGGGTCTTCCCATGGCCATTTaGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGG +
Preference number: 6 (lower is better)
Translates to: HSDTPWGLPMAI*LAIERSEAVLR
Trigger: CCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS CAA 90 bp GGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATGCGGCTGAGGCAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: GIGVRQTADHPLLFD*RLSACFLMRLRQEN
Trigger: ATTCTCCTGCCTCAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527774.1
ENST00000664077.1
CDS CAA 90 bp CAGGGACGAGCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTaGACTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCT +
Preference number: 6 (lower is better)
Translates to: QGRAVPCCRFPARLL*TVANNGEHSVPRTP
Trigger: AGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 72 bp ACCGGTCTAAAATCCTTGCCCTCAACGGCATCATTCTaGCACTCCATGGGGTCTTCCCATGGCCATTTGGCT +
Preference number: 6 (lower is better)
Translates to: TGLKSLPSTASF*HSMGSSHGHLA
Trigger: AGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATTTTAGACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527533.1
ENST00000527774.1
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS TCA 72 bp TGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCT +
Preference number: 6 (lower is better)
Translates to: WSQTDSRPSFAV*LASLGLFPYAA
Trigger: AGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527774.1
ENST00000664077.1
CDS CCA 72 bp AATCCTTGCCCTCAACGGCATCATTCTGACACTCCATaGGGTCTTCCCATGGCCATTTGGCTTGCCATAGAG +
Preference number: 6 (lower is better)
Translates to: NPCPQRHHSDTP*GLPMAIWLAIE
Trigger: CTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527533.1
ENST00000527774.1
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS CCA 72 bp CATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCATaGGCTGTGAGTTGGGCTGTCTTTGATGACTTCTTG +
Preference number: 6 (lower is better)
Translates to: HREVRGSTQGPS*AVSWAVFDDFL
Trigger: CAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657363.1
ENST00000657507.1
CDS CCA 72 bp CATTCAGTACCCAGAACCCCTGCCAAATTTCACACTTaGGGTTTAGCCCAGTTTCACGGACGTCCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: HSVPRTPAKFHT*GLAQFHGRPSP
Trigger: CGGAGAAGGACGTCCGTGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS CAA 90 bp GGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAGGCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: GIGVRQTADHPLLFD*RLSACFLIKSQAQC
Trigger: GCACTGAGCCTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527533.1
ENST00000657363.1
CDS CAA 90 bp GGAAAGACCATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GKTIGIGVRQTADHP*LFDLRLSACFLMRL
Trigger: CAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATGGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527774.1
ENST00000664077.1
CDS CAA 72 bp GCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTaGACTGTGGCCAACAATGGAGAACATTCAGTACCC +
Preference number: 6 (lower is better)
Translates to: AVPCCRFPARLL*TVANNGEHSVP
Trigger: GGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS TCA 72 bp CTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTTaGCTGTGGCCAACAATGGAGAACATTCAGTACCCA +
Preference number: 6 (lower is better)
Translates to: LCHAVDFRRGFF*LWPTMENIQYP
Trigger: TGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS CAA 72 bp GTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VRQTADHPLLFD*RLSACFLIKSQ
Trigger: CTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527533.1
ENST00000657363.1
CDS CAA 72 bp ATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: IGIGVRQTADHP*LFDLRLSACFL
Trigger: AAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527533.1
ENST00000527774.1
ENST00000657363.1
ENST00000657507.1
ENST00000664077.1
CDS CAA 72 bp TTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTaGACTTGCGTCTCTCGGCCTGTTTCCTTATCTGTG +
Preference number: 6 (lower is better)
Translates to: LESDRQQTILCC*TCVSRPVSLSV
Trigger: CACAGATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657507.1
CDS CAA 90 bp GGAAAGACCATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTTATAAAGAGC +
Preference number: 6 (lower is better)
Translates to: GKTIGIGVRQTADHP*LFDLRLSACFLIKS
Trigger: GCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATGGTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527533.1
ENST00000657363.1
CDS GCA 72 bp GGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTaGCAAATTTCACACTTGGGGTTTAGCCCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: GQQWRTFSTQNP*QISHLGFSPVS
Trigger: TGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657363.1
CDS CAA 90 bp GCTCCAGCTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTaGATATGCAGTAGACTTGCTACTTCTATGACTAAGACATCATCT +
Preference number: 6 (lower is better)
Translates to: APAEHLQRARLSATL*ICSRLATSMTKTSS
Trigger: AGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGCTGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527774.1
CDS TCA 72 bp GATGTTAGGAGTTTAAGACCAGCCCAGCCAACATGGTaGAATGCGGCCTCTACTAACAATACAAAAATAAGC +
Preference number: 6 (lower is better)
Translates to: DVRSLRPAQPTW*NAASTNNTKIS
Trigger: GCTTATTTTTGTATTGTTAGTAGAGGCCGCATTTCACCATGTTGGCTGGGCTGGTCTTAAACTCCTAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657507.1
CDS CAA 72 bp GAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTaGATATGCAGTAGACTTGCTACTTCTATGACTAAG +
Preference number: 6 (lower is better)
Translates to: EHLQRARLSATL*ICSRLATSMTK
Trigger: CTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527774.1
ENST00000657507.1
ENST00000664077.1