Pregenerated sensors for LINC02727 (Homo sapiens)
Ensembl gene IDs: ENSG00000254823Ensembl transcript IDs: ENST00000527533.1, ENST00000527774.1, ENST00000657363.1, ENST00000657507.1, ENST00000664077.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TTGGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCATaGGCTGTGAGTTGGGCTGTCTTTGATGACTTCTTGGTGCGTGTG | + |
Preference number: 5 (lower is better) Translates to: LACHREVRGSTQGPS*AVSWAVFDDFLVRV Trigger: CACACGCACCAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657363.1 ENST00000657507.1 |
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CDS CCA 90 bp | CAACGGCATCATTCTGACACTCCATGGGGTCTTCCCATGGCCATTTaGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCAT | + |
Preference number: 5 (lower is better) Translates to: QRHHSDTPWGLPMAI*LAIERSEAVLRVPH Trigger: ATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS TCA 90 bp | CATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCTGAGGCAGGA | + |
Preference number: 5 (lower is better) Translates to: HWHWSQTDSRPSFAV*LASLGLFPYAAEAG Trigger: TCCTGCCTCAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527774.1 ENST00000664077.1 |
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CDS TCA 90 bp | AGGGACGAGCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTTaGCTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTG | + |
Preference number: 5 (lower is better) Translates to: RDELCHAVDFRRGFF*LWPTMENIQYPEPL Trigger: CAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS GCA 90 bp | TTCCCAAGAGCGAGTGACAGTGTCGTTCAGGGACGAGCTGTGCCATaGTGTAGATTTCCGGCGAGGCTTCTTTTGACTGTGGCCAACAAT | + |
Preference number: 5 (lower is better) Translates to: FPRASDSVVQGRAVP*CRFPARLLLTVANN Trigger: ATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTGAACGACACTGTCACTCGCTCTTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 90 bp | GAATCCATGACCGGTCTAAAATCCTTGCCCTCAACGGCATCATTCTaGCACTCCATGGGGTCTTCCCATGGCCATTTGGCTTGCCATAGA | + |
Preference number: 5 (lower is better) Translates to: ESMTGLKSLPSTASF*HSMGSSHGHLACHR Trigger: TCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATTTTAGACCGGTCATGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527533.1 ENST00000527774.1 ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS TCA 90 bp | CATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAGGCTCA | + |
Preference number: 5 (lower is better) Translates to: HWHWSQTDSRPSFAV*LASLGLFPYKEPGS Trigger: TGAGCCTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527533.1 ENST00000657363.1 |
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CDS GCA 90 bp | TTTGACTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTaGCAAATTTCACACTTGGGGTTTAGCCCAGTTTCACGGACGTCC | + |
Preference number: 5 (lower is better) Translates to: FDCGQQWRTFSTQNP*QISHLGFSPVSRTS Trigger: GGACGTCCGTGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 90 bp | GGATCATTTGATGTTAGGAGTTTAAGACCAGCCCAGCCAACATGGTaGAATGCGGCCTCTACTAACAATACAAAAATAAGCTGGGCGTGG | + |
Preference number: 5 (lower is better) Translates to: GSFDVRSLRPAQPTW*NAASTNNTKISWAW Trigger: CCACGCCCAGCTTATTTTTGTATTGTTAGTAGAGGCCGCATTTCACCATGTTGGCTGGGCTGGTCTTAAACTCCTAACATCAAATGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657507.1 |
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CDS GCA 90 bp | GCTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTTGATATaGAGTAGACTTGCTACTTCTATGACTAAGACATCATCTCCATTT | + |
Preference number: 5 (lower is better) Translates to: AEHLQRARLSATLLI*SRLATSMTKTSSPF Trigger: AAATGGAGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527774.1 |
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CDS GCA 90 bp | ACTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTTGATATaGAGTAGACTTGCTACTTCTATGACTAAGACATCATCTCCATTT | + |
Preference number: 5 (lower is better) Translates to: TEHLQRARLSATLLI*SRLATSMTKTSSPF Trigger: AAATGGAGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657507.1 ENST00000664077.1 |
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CDS GCA 72 bp | TCCCCAGCACTGCGCTGCAGCAGCCCCTTTGGCTTCTaGTGTCTCTTCTCCATGATCCCTGGCTTGTTTGGA | + |
Preference number: 6 (lower is better) Translates to: SPALRCSSPFGF*CLFSMIPGLFG Trigger: TCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGGCTGCTGCAGCGCAGTGCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 72 bp | GCAGCAGCCCCTTTGGCTTCTGCTGTCTCTTCTCCATaGTCCCTGGCTTGTTTGGAGTTCCTGCCATTCCCC | + |
Preference number: 6 (lower is better) Translates to: AAAPLASAVSSP*SLACLEFLPFP Trigger: GGGGAATGGCAGGAACTCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGGCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS CCA 72 bp | CCCCTTTGGCTTCTGCTGTCTCTTCTCCATGATCCCTaGCTTGTTTGGAGTTCCTGCCATTCCCCTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: PLWLLLSLLHDP*LVWSSCHSPPS Trigger: GGAGGGAGGGGAATGGCAGGAACTCCAAACAAGCCAGGGATCATGGAGAAGAGACAGCAGAAGCCAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 72 bp | AGGTCAGAGGCAGTACTCAGGGTCCCTCATGGGCTGTaGGTTGGGCTGTCTTTGATGACTTCTTGGTGCGTG | + |
Preference number: 6 (lower is better) Translates to: RSEAVLRVPHGL*VGLSLMTSWCV Trigger: CACGCACCAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657363.1 ENST00000657507.1 |
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CDS GCA 72 bp | GCGAGTGACAGTGTCGTTCAGGGACGAGCTGTGCCATaGTGTAGATTTCCGGCGAGGCTTCTTTTGACTGTG | + |
Preference number: 6 (lower is better) Translates to: ASDSVVQGRAVP*CRFPARLLLTV Trigger: CACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTGAACGACACTGTCACTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS CCA 72 bp | CATTCTGACACTCCATGGGGTCTTCCCATGGCCATTTaGCTTGCCATAGAGAGGTCAGAGGCAGTACTCAGG | + |
Preference number: 6 (lower is better) Translates to: HSDTPWGLPMAI*LAIERSEAVLR Trigger: CCTGAGTACTGCCTCTGACCTCTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS CAA 90 bp | GGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATGCGGCTGAGGCAGGAGAAT | + |
Preference number: 6 (lower is better) Translates to: GIGVRQTADHPLLFD*RLSACFLMRLRQEN Trigger: ATTCTCCTGCCTCAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527774.1 ENST00000664077.1 |
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CDS CAA 90 bp | CAGGGACGAGCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTaGACTGTGGCCAACAATGGAGAACATTCAGTACCCAGAACCCCT | + |
Preference number: 6 (lower is better) Translates to: QGRAVPCCRFPARLL*TVANNGEHSVPRTP Trigger: AGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGCTCGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 72 bp | ACCGGTCTAAAATCCTTGCCCTCAACGGCATCATTCTaGCACTCCATGGGGTCTTCCCATGGCCATTTGGCT | + |
Preference number: 6 (lower is better) Translates to: TGLKSLPSTASF*HSMGSSHGHLA Trigger: AGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATTTTAGACCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000527533.1 ENST00000527774.1 ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS TCA 72 bp | TGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTaGCTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCT | + |
Preference number: 6 (lower is better) Translates to: WSQTDSRPSFAV*LASLGLFPYAA Trigger: AGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527774.1 ENST00000664077.1 |
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CDS CCA 72 bp | AATCCTTGCCCTCAACGGCATCATTCTGACACTCCATaGGGTCTTCCCATGGCCATTTGGCTTGCCATAGAG | + |
Preference number: 6 (lower is better) Translates to: NPCPQRHHSDTP*GLPMAIWLAIE Trigger: CTCTATGGCAAGCCAAATGGCCATGGGAAGACCCCATGGAGTGTCAGAATGATGCCGTTGAGGGCAAGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000527533.1 ENST00000527774.1 ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS CCA 72 bp | CATAGAGAGGTCAGAGGCAGTACTCAGGGTCCCTCATaGGCTGTGAGTTGGGCTGTCTTTGATGACTTCTTG | + |
Preference number: 6 (lower is better) Translates to: HREVRGSTQGPS*AVSWAVFDDFL Trigger: CAAGAAGTCATCAAAGACAGCCCAACTCACAGCCCATGAGGGACCCTGAGTACTGCCTCTGACCTCTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657363.1 ENST00000657507.1 |
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CDS CCA 72 bp | CATTCAGTACCCAGAACCCCTGCCAAATTTCACACTTaGGGTTTAGCCCAGTTTCACGGACGTCCTTCTCCG | + |
Preference number: 6 (lower is better) Translates to: HSVPRTPAKFHT*GLAQFHGRPSP Trigger: CGGAGAAGGACGTCCGTGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS CAA 90 bp | GGCATTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAGGCTCAGTGC | + |
Preference number: 6 (lower is better) Translates to: GIGVRQTADHPLLFD*RLSACFLIKSQAQC Trigger: GCACTGAGCCTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527533.1 ENST00000657363.1 |
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CDS CAA 90 bp | GGAAAGACCATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTTATGCGGCTG | + |
Preference number: 6 (lower is better) Translates to: GKTIGIGVRQTADHP*LFDLRLSACFLMRL Trigger: CAGCCGCATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATGGTCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527774.1 ENST00000664077.1 |
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CDS CAA 72 bp | GCTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTaGACTGTGGCCAACAATGGAGAACATTCAGTACCC | + |
Preference number: 6 (lower is better) Translates to: AVPCCRFPARLL*TVANNGEHSVP Trigger: GGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS TCA 72 bp | CTGTGCCATGCTGTAGATTTCCGGCGAGGCTTCTTTTaGCTGTGGCCAACAATGGAGAACATTCAGTACCCA | + |
Preference number: 6 (lower is better) Translates to: LCHAVDFRRGFF*LWPTMENIQYP Trigger: TGGGTACTGAATGTTCTCCATTGTTGGCCACAGTCAAAAGAAGCCTCGCCGGAAATCTACAGCATGGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS CAA 72 bp | GTCAGACAGACAGCAGACCATCCTTTGCTGTTTGACTaGCGTCTCTCGGCCTGTTTCCTTATAAAGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: VRQTADHPLLFD*RLSACFLIKSQ Trigger: CTGGCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527533.1 ENST00000657363.1 |
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CDS CAA 72 bp | ATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTT | + |
Preference number: 6 (lower is better) Translates to: IGIGVRQTADHP*LFDLRLSACFL Trigger: AAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000527533.1 ENST00000527774.1 ENST00000657363.1 ENST00000657507.1 ENST00000664077.1 |
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CDS CAA 72 bp | TTGGAGTCAGACAGACAGCAGACCATCCTTTGCTGTTaGACTTGCGTCTCTCGGCCTGTTTCCTTATCTGTG | + |
Preference number: 6 (lower is better) Translates to: LESDRQQTILCC*TCVSRPVSLSV Trigger: CACAGATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657507.1 |
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CDS CAA 90 bp | GGAAAGACCATTGGCATTGGAGTCAGACAGACAGCAGACCATCCTTaGCTGTTTGACTTGCGTCTCTCGGCCTGTTTCCTTATAAAGAGC | + |
Preference number: 6 (lower is better) Translates to: GKTIGIGVRQTADHP*LFDLRLSACFLIKS Trigger: GCTCTTTATAAGGAAACAGGCCGAGAGACGCAAGTCAAACAGCAAAGGATGGTCTGCTGTCTGTCTGACTCCAATGCCAATGGTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527533.1 ENST00000657363.1 |
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CDS GCA 72 bp | GGCCAACAATGGAGAACATTCAGTACCCAGAACCCCTaGCAAATTTCACACTTGGGGTTTAGCCCAGTTTCA | + |
Preference number: 6 (lower is better) Translates to: GQQWRTFSTQNP*QISHLGFSPVS Trigger: TGAAACTGGGCTAAACCCCAAGTGTGAAATTTGGCAGGGGTTCTGGGTACTGAATGTTCTCCATTGTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657363.1 |
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CDS CAA 90 bp | GCTCCAGCTGAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTaGATATGCAGTAGACTTGCTACTTCTATGACTAAGACATCATCT | + |
Preference number: 6 (lower is better) Translates to: APAEHLQRARLSATL*ICSRLATSMTKTSS Trigger: AGATGATGTCTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTCAGCTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527774.1 |
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CDS TCA 72 bp | GATGTTAGGAGTTTAAGACCAGCCCAGCCAACATGGTaGAATGCGGCCTCTACTAACAATACAAAAATAAGC | + |
Preference number: 6 (lower is better) Translates to: DVRSLRPAQPTW*NAASTNNTKIS Trigger: GCTTATTTTTGTATTGTTAGTAGAGGCCGCATTTCACCATGTTGGCTGGGCTGGTCTTAAACTCCTAACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657507.1 |
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CDS CAA 72 bp | GAACACTTACAAAGAGCCAGGCTCAGTGCTACACTGTaGATATGCAGTAGACTTGCTACTTCTATGACTAAG | + |
Preference number: 6 (lower is better) Translates to: EHLQRARLSATL*ICSRLATSMTK Trigger: CTTAGTCATAGAAGTAGCAAGTCTACTGCATATCAACAGTGTAGCACTGAGCCTGGCTCTTTGTAAGTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527774.1 ENST00000657507.1 ENST00000664077.1 |