Pregenerated sensors for LINC02725 (Homo sapiens)
Ensembl gene IDs: ENSG00000273415Ensembl transcript IDs: ENST00000609911.1, ENST00000649115.1, ENST00000654938.1, ENST00000664091.1, ENST00000665260.1, ENST00000670942.1, ENST00000671140.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGACCCTTCCCTGTCACTCTTCTGCCTTCCGGTTTCAAGCTGTGTaGCCTGACCTCCTGTGGAGTAGGAGCTTACAGATCACAGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: MTLPCHSSAFRFQAV*PDLLWSRSLQITVS Trigger: ACTGACTGTGATCTGTAAGCTCCTACTCCACAGGAGGTCAGGGCACACAGCTTGAAACCGGAAGGCAGAAGAGTGACAGGGAAGGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS TCA 90 bp | GAGACAAACTTCCGCACAAGGTCGGATGCACATTCCTCTTCCTGCTaGGCCTGGTCACCAGAGATCACCCCTCACAGGATTTCCATAAGA | + |
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Preference number: 5 (lower is better) Translates to: ETNFRTRSDAHSSSC*AWSPEITPHRISIR Trigger: TCTTATGGAAATCCTGTGAGGGGTGATCTCTGGTGACCAGGCTCAGCAGGAAGAGGAATGTGCATCCGACCTTGTGCGGAAGTTTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 90 bp | CTCATGAAGAGCTTCTCTGATGCTCCTCCTCATGAAGAGCTGCTCTaGTGCTCTACTTCTCCAGAGAGGAGTGTAGACAGAGGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LMKSFSDAPPHEELL*CSTSPERSVDRGPP Trigger: AGGAGGCCCTCTGTCTACACTCCTCTCTGGAGAAGTAGAGCATCAGAGCAGCTCTTCATGAGGAGGAGCATCAGAGAAGCTCTTCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS GCA 90 bp | GGGCCAGGCAGTTCAGAAAGGAATCTCTTCCAAAGCGCCATCTGTTaGAATGTCAGCGGCTTCATGCATCATTCACAGGAGCTGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: GPGSSERNLFQSAIC*NVSGFMHHSQELSL Trigger: AAGTGACAGCTCCTGTGAATGATGCATGAAGCCGCTGACATTGCAACAGATGGCGCTTTGGAAGAGATTCCTTTCTGAACTGCCTGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS GCA 90 bp | TTTCTTAGACGGTGTAACCGGGGTGCACGGGGCAGTGAGCTAAGGTaGAATCTTCCGTCTGTGTTGTGCTTTACACTTGTTCTCACTATG | + |
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Preference number: 5 (lower is better) Translates to: FLRRCNRGARGSELR*NLPSVLCFTLVLTM Trigger: CATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCCCCGTGCACCCCGGTTACACCGTCTAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000649115.1 ENST00000654938.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CCA 90 bp | CACTCTTCTGCCTTCCGGTTTCAAGCTGTGTGCCCTGACCTCCTGTaGAGTAGGAGCTTACAGATCACAGTCAGTGGATTCTTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: HSSAFRFQAVCPDLL*SRSLQITVSGFLEF Trigger: GAATTCTAAGAATCCACTGACTGTGATCTGTAAGCTCCTACTCCACAGGAGGTCAGGGCACACAGCTTGAAACCGGAAGGCAGAAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 90 bp | GTTAGTCAGATCAATCACTGTAGCCCACACCATAACTTCCTTATTTaGCTGTTGAATCAGCAGCATGGAGAGCACAAGGTGGCTGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VSQINHCSPHHNFLI*LLNQQHGEHKVAGW Trigger: CCACCCAGCCACCTTGTGCTCTCCATGCTGCTGATTCAACAGGCAAATAAGGAAGTTATGGTGTGGGCTACAGTGATTGATCTGACTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 90 bp | GGTGCACGGGGCAGTGAGCTAAGGTGCAATCTTCCGTCTGTGTTGTaGTTTACACTTGTTCTCACTATGCTTCAGTTTAAAAGGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: GARGSELRCNLPSVL*FTLVLTMLQFKRDL Trigger: CAGGTCCCTTTTAAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCCCCGTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS GCA 90 bp | GGTGCACGGGGCAGTGAGCTAAGGTGCAATCTTCCGTCTGTGTTGTaGTTTACACTTGTTCTCACTATGCTTCAGTTTAAAAGGGACACT | + |
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Preference number: 5 (lower is better) Translates to: GARGSELRCNLPSVL*FTLVLTMLQFKRDT Trigger: AGTGTCCCTTTTAAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCCCCGTGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654938.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CCA 90 bp | CCTTATTTGCCTGTTGAATCAGCAGCATGGAGAGCACAAGGTGGCTaGGTGGCAGTCTTAACTCCCAGGTCAAGGAAATTATTCTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: PYLPVESAAWRAQGG*VAVLTPRSRKLFLC Trigger: ACACAAGAATAATTTCCTTGACCTGGGAGTTAAGACTGCCACCCAGCCACCTTGTGCTCTCCATGCTGCTGATTCAACAGGCAAATAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CCA 90 bp | CTGCTTCTTACTCTCCGAGCAACCTCAAGCAGCTGTATGACCTCATaGAGACAAACTGACAAAACACTTACACTTCTCCAGAGAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLTLRATSSSCMTS*RQTDKTLTLLQRGV Trigger: CACTCCTCTCTGGAGAAGTGTAAGTGTTTTGTCAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGTAAGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS GCA 90 bp | TCCCAGATTGCTAGCATGCACAATGAGTACTTCAGATTTGGTAACTaGCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTTGCGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SQIASMHNEYFRFGN*RSLFCCPIREVAAL Trigger: AAGAGCCGCAACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGTTACCAAATCTGAAGTACTCATTGTGCATGCTAGCAATCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 90 bp | TTCTCATTCTGCTTCTTACTCTCCGAGCAACCTCAAGCAGCTGTATaGCCTCATGGAGACAAACTGACAAAACACTTACACTTCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: FSFCFLLSEQPQAAV*PHGDKLTKHLHFSR Trigger: TCTGGAGAAGTGTAAGTGTTTTGTCAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGTAAGAAGCAGAATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS GCA 90 bp | GGTGCAATCTTCCGTCTGTGTTGTGCTTTACACTTGTTCTCACTATaGTTCAGTTTAAAAGGGACCTGTCCTGATGTCTTCAACATACCA | + |
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Preference number: 5 (lower is better) Translates to: GAIFRLCCALHLFSL*FSLKGTCPDVFNIP Trigger: TGGTATGTTGAAGACATCAGGACAGGTCCCTTTTAAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS TCA 90 bp | TATCTCTACTTGGTCTCAACCAGATATCTTCCACCTACATATGCTTaGCTCAGTGTGCTGGGCTTCTTGTGTAAGGTTTCTTCTGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: YLYLVSTRYLPPTYA*LSVLGFLCKVSSGK Trigger: TTTTCCAGAAGAAACCTTACACAAGAAGCCCAGCACACTGAGTCAAGCATATGTAGGTGGAAGATATCTGGTTGAGACCAAGTAGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS TCA 90 bp | GTAACACTTTTATTTCTGGAGGCACTCTGCAAAACCTTTCTTCCCTaGAGGAGCTCATGTCTGGTAGAAGGACTCAAATCTTCATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VTLLFLEALCKTFLP*RSSCLVEGLKSSFL Trigger: AAGGAATGAAGATTTGAGTCCTTCTACCAGACATGAGCTCCTTCAGGGAAGAAAGGTTTTGCAGAGTGCCTCCAGAAATAAAAGTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS GCA 90 bp | TTCTCATCTCATTACATTTGTACTTATGGTTCCTTCTGTGTCAAATaGTCCTCTTACATAGCTGGCTTCTCATCATTTAGGTTTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: FSSHYICTYGSFCVK*SSYIAGFSSFRFHL Trigger: AAGGTGAAACCTAAATGATGAGAAGCCAGCTATGTAAGAGGAGCATTTGACACAGAAGGAACCATAAGTACAAATGTAATGAGATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS GCA 72 bp | GGCACCAGGCTAGGGGTGGAGACAGACAAGGGAAGATaGTCAGCACATGAGCCTTCAGGCCAAAGTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GTRLGVETDKGR*SAHEPSGQSEL Trigger: AAGCTCACTTTGGCCTGAAGGCTCATGTGCTGAGCATCTTCCCTTGTCTGTCTCCACCCCTAGCCTGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 72 bp | CCCTGTCACTCTTCTGCCTTCCGGTTTCAAGCTGTGTaGCCTGACCTCCTGTGGAGTAGGAGCTTACAGATC | + |
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Preference number: 6 (lower is better) Translates to: PCHSSAFRFQAV*PDLLWSRSLQI Trigger: GATCTGTAAGCTCCTACTCCACAGGAGGTCAGGGCACACAGCTTGAAACCGGAAGGCAGAAGAGTGACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 72 bp | CGGTGTAACCGGGGTGCACGGGGCAGTGAGCTAAGGTaGAATCTTCCGTCTGTGTTGTGCTTTACACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RCNRGARGSELR*NLPSVLCFTLV Trigger: AACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCCCCGTGCACCCCGGTTACACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000649115.1 ENST00000654938.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CCA 72 bp | GCCTTCCGGTTTCAAGCTGTGTGCCCTGACCTCCTGTaGAGTAGGAGCTTACAGATCACAGTCAGTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: AFRFQAVCPDLL*SRSLQITVSGF Trigger: GAATCCACTGACTGTGATCTGTAAGCTCCTACTCCACAGGAGGTCAGGGCACACAGCTTGAAACCGGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CAA 90 bp | AGGGCCAGGCAGTTCAGAAAGGAATCTCTTCCAAAGCGCCATCTGTaGCAATGTCAGCGGCTTCATGCATCATTCACAGGAGCTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: RARQFRKESLPKRHL*QCQRLHASFTGAVT Trigger: AGTGACAGCTCCTGTGAATGATGCATGAAGCCGCTGACATTGCAACAGATGGCGCTTTGGAAGAGATTCCTTTCTGAACTGCCTGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 72 bp | TGCTTCTTACTCTCCGAGCAACCTCAAGCAGCTGTATaGCCTCATGGAGACAAACTTCCGCACAAGGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CFLLSEQPQAAV*PHGDKLPHKVG Trigger: TCCGACCTTGTGCGGAAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGTAAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS GCA 72 bp | TCCAAAGCGCCATCTGTTGCAATGTCAGCGGCTTCATaGATCATTCACAGGAGCTGTCACTTCCACCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SKAPSVAMSAAS*IIHRSCHFHLE Trigger: CTCAAGGTGGAAGTGACAGCTCCTGTGAATGATGCATGAAGCCGCTGACATTGCAACAGATGGCGCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS CCA 72 bp | CCTGTTGAATCAGCAGCATGGAGAGCACAAGGTGGCTaGGTGGCAGTCTTAACTCCCAGGTCAAGGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: PVESAAWRAQGG*VAVLTPRSRKL Trigger: TAATTTCCTTGACCTGGGAGTTAAGACTGCCACCCAGCCACCTTGTGCTCTCCATGCTGCTGATTCAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CAA 90 bp | CAGATCAATCACTGTAGCCCACACCATAACTTCCTTATTTGCCTGTaGAATCAGCAGCATGGAGAGCACAAGGTGGCTGGGTGGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QINHCSPHHNFLICL*NQQHGEHKVAGWQS Trigger: AGACTGCCACCCAGCCACCTTGTGCTCTCCATGCTGCTGATTCAACAGGCAAATAAGGAAGTTATGGTGTGGGCTACAGTGATTGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS TCA 72 bp | ACTGTAGCCCACACCATAACTTCCTTATTTGCCTGTTaGATCAGCAGCATGGAGAGCACAAGGTGGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TVAHTITSLFAC*ISSMESTRWLG Trigger: ACCCAGCCACCTTGTGCTCTCCATGCTGCTGATTCAACAGGCAAATAAGGAAGTTATGGTGTGGGCTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS TCA 72 bp | AGCTTCTCTGATGCTCCTCCTCATGAAGAGCTGCTCTaGTGCTCTACTTCTCCAGAGAGGAGTGTAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSDAPPHEELL*CSTSPERSVDR Trigger: TCTGTCTACACTCCTCTCTGGAGAAGTAGAGCATCAGAGCAGCTCTTCATGAGGAGGAGCATCAGAGAAGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS CAA 72 bp | ACTCTCCCTCACCCCCATGGTGGAGCAATTTCCCTCTaGTTAGTCAGATCAATCACTGTAGCCCACACCATA | + |
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Preference number: 6 (lower is better) Translates to: TLPHPHGGAISL*LVRSITVAHTI Trigger: TATGGTGTGGGCTACAGTGATTGATCTGACTAACAAGAGGGAAATTGCTCCACCATGGGGGTGAGGGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CAA 72 bp | ACTGCCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTaGCGGCTCTTGAGTAAAGCTCATCAAGGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: TAEVFSVVRSVK*RLLSKAHQGRL Trigger: AAGTCTGCCTTGATGAGCTTTACTCAAGAGCCGCAACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS CAA 90 bp | ACTGCCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTTGCGGCTCTaGAGTAAAGCTCATCAAGGCAGACTTTCTGAGAAATTCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: TAEVFSVVRSVKLRL*SKAHQGRLSEKFPM Trigger: CATTGGGAATTTCTCAGAAAGTCTGCCTTGATGAGCTTTACTCAAGAGCCGCAACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 72 bp | TGCTTCTTACTCTCCGAGCAACCTCAAGCAGCTGTATaGCCTCATGGAGACAAACTTGGGTTATATGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CFLLSEQPQAAV*PHGDKLGLYGE Trigger: TTCCCCATATAACCCAAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGTAAGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664091.1 |
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| CDS CCA 72 bp | ACTCTCCGAGCAACCTCAAGCAGCTGTATGACCTCATaGAGACAAACTGACAAAACACTTACACTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TLRATSSSCMTS*RQTDKTLTLLQ Trigger: CTGGAGAAGTGTAAGTGTTTTGTCAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS CAA 72 bp | CGGGGCAGTGAGCTAAGGTGCAATCTTCCGTCTGTGTaGTGCTTTACACTTGTTCTCACTATGCTTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: RGSELRCNLPSV*CFTLVLTMLQF Trigger: AAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000649115.1 ENST00000654938.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CAA 72 bp | CAGTTCAGAAAGGAATCTCTTCCAAAGCGCCATCTGTaGCAATGTCAGCGGCTTCATGCATCATTCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: QFRKESLPKRHL*QCQRLHASFTG Trigger: TCCTGTGAATGATGCATGAAGCCGCTGACATTGCAACAGATGGCGCTTTGGAAGAGATTCCTTTCTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS CAA 90 bp | GATTTGGTAACTGCCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTaGCGGCTCTTGAGTAAAGCTCATCAAGGCAGACTTTCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DLVTAEVFSVVRSVK*RLLSKAHQGRLSEK Trigger: TTTCTCAGAAAGTCTGCCTTGATGAGCTTTACTCAAGAGCCGCAACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGTTACCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 72 bp | TGCTTCTTACTCTCCGAGCAACCTCAAGCAGCTGTATaGCCTCATGGAGACAAACTGACAAAACACTTACAC | + |
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Preference number: 6 (lower is better) Translates to: CFLLSEQPQAAV*PHGDKLTKHLH Trigger: GTGTAAGTGTTTTGTCAGTTTGTCTCCATGAGGTCATACAGCTGCTTGAGGTTGCTCGGAGAGTAAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS GCA 72 bp | ATCAATCACTGTAGCCCACACCATAACTTCCTTATTTaGCTGTTGAATCAGCAGCATGGAGAGCACAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: INHCSPHHNFLI*LLNQQHGEHKV Trigger: CACCTTGTGCTCTCCATGCTGCTGATTCAACAGGCAAATAAGGAAGTTATGGTGTGGGCTACAGTGATTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS CAA 72 bp | GTCTTTTCTGTTGTCCGATCCGTGAAGTTGCGGCTCTaGAGTAAAGCTCATCAAGGCAGACTTTCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VFSVVRSVKLRL*SKAHQGRLSEK Trigger: TTTCTCAGAAAGTCTGCCTTGATGAGCTTTACTCAAGAGCCGCAACTTCACGGATCGGACAACAGAAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS TCA 72 bp | TTGGTCTCAACCAGATATCTTCCACCTACATATGCTTaGCTCAGTGTGCTGGGCTTCTTGTGTAAGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LVSTRYLPPTYA*LSVLGFLCKVS Trigger: AGAAACCTTACACAAGAAGCCCAGCACACTGAGTCAAGCATATGTAGGTGGAAGATATCTGGTTGAGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS TCA 72 bp | TTATTTCTGGAGGCACTCTGCAAAACCTTTCTTCCCTaGAGGAGCTCATGTCTGGTAGAAGGACTCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LFLEALCKTFLP*RSSCLVEGLKS Trigger: AGATTTGAGTCCTTCTACCAGACATGAGCTCCTTCAGGGAAGAAAGGTTTTGCAGAGTGCCTCCAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665260.1 |
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| CDS GCA 72 bp | GCTAGCATGCACAATGAGTACTTCAGATTTGGTAACTaGCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ASMHNEYFRFGN*RSLFCCPIREV Trigger: AACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGTTACCAAATCTGAAGTACTCATTGTGCATGCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS CAA 90 bp | CTTATTAGTCCCAGATTGCTAGCATGCACAATGAGTACTTCAGATTaGGTAACTGCCGAAGTCTTTTCTGTTGTCCGATCCGTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LISPRLLACTMSTSD*VTAEVFSVVRSVKL Trigger: CAACTTCACGGATCGGACAACAGAAAAGACTTCGGCAGTTACCAAATCTGAAGTACTCATTGTGCATGCTAGCAATCTGGGACTAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS GCA 72 bp | CCAGATATCTTCCACCTACATATGCTTGACTCAGTGTaGTGGGCTTCTTGTGTAAGGTTTCTTCTGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: PDIFHLHMLDSV*WASCVRFLLEK Trigger: TTTTTCCAGAAGAAACCTTACACAAGAAGCCCAGCACACTGAGTCAAGCATATGTAGGTGGAAGATATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000609911.1 ENST00000649115.1 ENST00000654938.1 ENST00000664091.1 ENST00000665260.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 72 bp | GGCAGTGAGCTAAGGTGCAATCTTCCGTCTGTGTTGTaGTTTACACTTGTTCTCACTATGCTTCAGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: GSELRCNLPSVL*FTLVLTMLQFK Trigger: TTTAAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAAGATTGCACCTTAGCTCACTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000649115.1 ENST00000654938.1 ENST00000670942.1 ENST00000671140.1 |
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| CDS GCA 72 bp | TTCCGTCTGTGTTGTGCTTTACACTTGTTCTCACTATaGTTCAGTTTAAAAGGGACCTGTCCTGATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRLCCALHLFSL*FSLKGTCPDVF Trigger: GAAGACATCAGGACAGGTCCCTTTTAAACTGAAGCATAGTGAGAACAAGTGTAAAGCACAACACAGACGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS GCA 72 bp | AAGCTCATCAAGGCAGACTTTCTGAGAAATTCCCAATaGAACAGGTTTCAAGTAATTAACCAGGAAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: KLIKADFLRNSQ*NRFQVINQERL Trigger: GAGTCTTTCCTGGTTAATTACTTGAAACCTGTTGCATTGGGAATTTCTCAGAAAGTCTGCCTTGATGAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS CAA 72 bp | CTCATGGAGACAAACTTGGGTTATATGGGGAAGTCCTaGTTATTACTGATCTCCACTTCATTTCAAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: LMETNLGYMGKS*LLLISTSFQIG Trigger: CCCTATTTGAAATGAAGTGGAGATCAGTAATAACAAGGACTTCCCCATATAACCCAAGTTTGTCTCCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664091.1 |
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| CDS TCA 72 bp | GTTCTCACTATGCTTCAGTTTAAAAGGGACCTGTCCTaGTGTCTTCAACATACCAAAGAAATTTCTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: VLTMLQFKRDLS*CLQHTKEISHL Trigger: GAGATGAGAAATTTCTTTGGTATGTTGAAGACATCAGGACAGGTCCCTTTTAAACTGAAGCATAGTGAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS GCA 72 bp | AGACAATTTAACCTTATTAGTCCCAGATTGCTAGCATaGACAATGAGTACTTCAGATTTGGTAACTGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: RQFNLISPRLLA*TMSTSDLVTAE Trigger: TTCGGCAGTTACCAAATCTGAAGTACTCATTGTGCATGCTAGCAATCTGGGACTAATAAGGTTAAATTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649115.1 ENST00000654938.1 |
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| CDS GCA 72 bp | CATTACATTTGTACTTATGGTTCCTTCTGTGTCAAATaGTCCTCTTACATAGCTGGCTTCTCATCATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: HYICTYGSFCVK*SSYIAGFSSFR Trigger: CCTAAATGATGAGAAGCCAGCTATGTAAGAGGAGCATTTGACACAGAAGGAACCATAAGTACAAATGTAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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| CDS CAA 72 bp | TTCAACATACCAAAGAAATTTCTCATCTCATTACATTaGTACTTATGGTTCCTTCTGTGTCAAATGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FNIPKKFLISLH*YLWFLLCQMLL Trigger: GAGGAGCATTTGACACAGAAGGAACCATAAGTACAAATGTAATGAGATGAGAAATTTCTTTGGTATGTTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649115.1 |
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