Pregenerated sensors for LINC02723 (Homo sapiens)
Ensembl gene IDs: ENSG00000231680Ensembl transcript IDs: ENST00000457725.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATACTCCACCTTCCCAGTCTCTGTTGCAACTGGGGGTGGCCGTGTaGTGCGGTTCATGCTCGGCCTTAGGTGGAGGGCCCCACTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DTPPSQSLLQLGVAV*CGSCSALGGGPHLA Trigger: AGCCAAGTGGGGCCCTCCACCTAAGGCCGAGCATGAACCGCATCACACGGCCACCCCCAGTTGCAACAGAGACTGGGAAGGTGGAGTATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 90 bp | GGTTCATGCTCGGCCTTAGGTGGAGGGCCCCACTTGGCTGAAGTGTaGCTTCCCTTGGTGGCAGTTGCAGTCCAGATGGCTCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GSCSALGGGPHLAEV*LPLVAVAVQMALLH Trigger: GTGGAGAAGAGCCATCTGGACTGCAACTGCCACCAAGGGAAGCCACACTTCAGCCAAGTGGGGCCCTCCACCTAAGGCCGAGCATGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS TCA 90 bp | GGAGGCAGCATGCTCAGCCTGGGTCCTGACAATAGGATTTCCATCTaGTACTCCACCTTCCCAGTCTCTGTTGCAACTGGGGGTGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: GGSMLSLGPDNRISI*YSTFPVSVATGGGR Trigger: ACGGCCACCCCCAGTTGCAACAGAGACTGGGAAGGTGGAGTATCAGATGGAAATCCTATTGTCAGGACCCAGGCTGAGCATGCTGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 90 bp | CTTCCCTTGGTGGCAGTTGCAGTCCAGATGGCTCTTCTCCACTTTTaGAGTGAACTTGATACAGTCCTGGAGTGCAGTGGCGTGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: LPLVAVAVQMALLHF*SELDTVLECSGVIL Trigger: CAAGATCACGCCACTGCACTCCAGGACTGTATCAAGTTCACTCCAAAAGTGGAGAAGAGCCATCTGGACTGCAACTGCCACCAAGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 90 bp | ACTTGGCTGAAGTGTGGCTTCCCTTGGTGGCAGTTGCAGTCCAGATaGCTCTTCTCCACTTTTGGAGTGAACTTGATACAGTCCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: TWLKCGFPWWQLQSR*LFSTFGVNLIQSWS Trigger: ACTCCAGGACTGTATCAAGTTCACTCCAAAAGTGGAGAAGAGCCATCTGGACTGCAACTGCCACCAAGGGAAGCCACACTTCAGCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS TCA 72 bp | CCTTCCCAGTCTCTGTTGCAACTGGGGGTGGCCGTGTaGTGCGGTTCATGCTCGGCCTTAGGTGGAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSQSLLQLGVAV*CGSCSALGGGP Trigger: GGGCCCTCCACCTAAGGCCGAGCATGAACCGCATCACACGGCCACCCCCAGTTGCAACAGAGACTGGGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 72 bp | TCGGCCTTAGGTGGAGGGCCCCACTTGGCTGAAGTGTaGCTTCCCTTGGTGGCAGTTGCAGTCCAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SALGGGPHLAEV*LPLVAVAVQMA Trigger: AGCCATCTGGACTGCAACTGCCACCAAGGGAAGCCACACTTCAGCCAAGTGGGGCCCTCCACCTAAGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 72 bp | GTGGAGGGCCCCACTTGGCTGAAGTGTGGCTTCCCTTaGTGGCAGTTGCAGTCCAGATGGCTCTTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: VEGPTWLKCGFP*WQLQSRWLFST Trigger: AGTGGAGAAGAGCCATCTGGACTGCAACTGCCACCAAGGGAAGCCACACTTCAGCCAAGTGGGGCCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CAA 90 bp | TCGGCCTTAGGTGGAGGGCCCCACTTGGCTGAAGTGTGGCTTCCCTaGGTGGCAGTTGCAGTCCAGATGGCTCTTCTCCACTTTTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SALGGGPHLAEVWLP*VAVAVQMALLHFWS Trigger: ACTCCAAAAGTGGAGAAGAGCCATCTGGACTGCAACTGCCACCAAGGGAAGCCACACTTCAGCCAAGTGGGGCCCTCCACCTAAGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 72 bp | GCCGGCGATCTTGTATCTTTCTTGCTAACAGAAGTCTaGTTTCGTGTGGGGAGGCAGCATGCTCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AGDLVSFLLTEV*FRVGRQHAQPG Trigger: CCCAGGCTGAGCATGCTGCCTCCCCACACGAAACCAGACTTCTGTTAGCAAGAAAGATACAAGATCGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS GCA 72 bp | GATTTCCATCTGATACTCCACCTTCCCAGTCTCTGTTaGAACTGGGGGTGGCCGTGTGATGCGGTTCATGCT | + |
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Preference number: 6 (lower is better) Translates to: DFHLILHLPSLC*NWGWPCDAVHA Trigger: AGCATGAACCGCATCACACGGCCACCCCCAGTTGCAACAGAGACTGGGAAGGTGGAGTATCAGATGGAAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 72 bp | GTGGCAGTTGCAGTCCAGATGGCTCTTCTCCACTTTTaGAGTGAACTTGATACAGTCCTGGAGTGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VAVAVQMALLHF*SELDTVLECSG Trigger: GCCACTGCACTCCAGGACTGTATCAAGTTCACTCCAAAAGTGGAGAAGAGCCATCTGGACTGCAACTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS TCA 72 bp | ATGCTCAGCCTGGGTCCTGACAATAGGATTTCCATCTaGTACTCCACCTTCCCAGTCTCTGTTGCAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: MLSLGPDNRISI*YSTFPVSVATG Trigger: CCCAGTTGCAACAGAGACTGGGAAGGTGGAGTATCAGATGGAAATCCTATTGTCAGGACCCAGGCTGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CCA 72 bp | AGCCACTATGCCCGGCCACAGTCTATGTTTCTAACCTaGACTGACTTTTCCAAAGAGCCAGTTCCTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SHYARPQSMFLT*TDFSKEPVPGT Trigger: TGTGCCAGGAACTGGCTCTTTGGAAAAGTCAGTCCAGGTTAGAAACATAGACTGTGGCCGGGCATAGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CAA 90 bp | CACAACATGTCAATAACCATAGTGGCCGGCGATCTTGTATCTTTCTaGCTAACAGAAGTCTGGTTTCGTGTGGGGAGGCAGCATGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HNMSITIVAGDLVSF*LTEVWFRVGRQHAQ Trigger: CTGAGCATGCTGCCTCCCCACACGAAACCAGACTTCTGTTAGCAAGAAAGATACAAGATCGCCGGCCACTATGGTTATTGACATGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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| CDS CAA 72 bp | TCAATAACCATAGTGGCCGGCGATCTTGTATCTTTCTaGCTAACAGAAGTCTGGTTTCGTGTGGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SITIVAGDLVSF*LTEVWFRVGRQ Trigger: CTGCCTCCCCACACGAAACCAGACTTCTGTTAGCAAGAAAGATACAAGATCGCCGGCCACTATGGTTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457725.1 |
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