Pregenerated sensors for LINC02717 (Homo sapiens)
Ensembl gene IDs: ENSG00000285735Ensembl transcript IDs: ENST00000650337.1, ENST00000652919.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTGGGGTCCACAGTGCAGCCCGAGCCCAGGGGCATCCAGTCTCCTaGATGAACTCCAGGGTCTCCCAGTGGAAGGGACAAGCTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SGVHSAARAQGHPVS*MNSRVSQWKGQALP Trigger: TGGCAGAGCTTGTCCCTTCCACTGGGAGACCCTGGAGTTCATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCACTGTGGACCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS GCA 90 bp | CCTGAGGTCAGCCTGGGAGTGGTGATTCCACAGTGGGGTCCACAGTaGAGCCCGAGCCCAGGGGCATCCAGTCTCCTGAATGAACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PEVSLGVVIPQWGPQ*SPSPGASSLLNELQ Trigger: CTGGAGTTCATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCACTGTGGACCCCACTGTGGAATCACCACTCCCAGGCTGACCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS TCA 90 bp | GGGTCCACAGTGCAGCCCGAGCCCAGGGGCATCCAGTCTCCTGAATaGACTCCAGGGTCTCCCAGTGGAAGGGACAAGCTCTGCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: GSTVQPEPRGIQSPE*TPGSPSGRDKLCHF Trigger: AAAGTGGCAGAGCTTGTCCCTTCCACTGGGAGACCCTGGAGTTCATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCACTGTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CCA 90 bp | AGGATCGTCACTGTTGCTGTCTTCCACCTCCACACCCTGTCCCACTaGAACATCTTCAGGGGCAGTAACAGGCATGGAGCTGCCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: RIVTVAVFHLHTLSH*NIFRGSNRHGAAIS Trigger: GGAGATGGCAGCTCCATGCCTGTTACTGCCCCTGAAGATGTTCCAGTGGGACAGGGTGTGGAGGTGGAAGACAGCAACAGTGACGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS GCA 90 bp | CCAGTGGAAGGGACAAGCTCTGCCACTTTCTCCATGAGGTCAGCTTaGACGGAGAGACTCTTAGAATCCCAAGCTTGGTCTGGGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PVEGTSSATFSMRSA*TERLLESQAWSGFS Trigger: AGAAAACCCAGACCAAGCTTGGGATTCTAAGAGTCTCTCCGTGCAAGCTGACCTCATGGAGAAAGTGGCAGAGCTTGTCCCTTCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS TCA 90 bp | GCAAATGTAAAGAAATCAAGGGCGAAGGTGAGAGCAATGAGCGGATaGGACTATGTGAGACGACAGGTGCAGAAAAGCTCTGCTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ANVKKSRAKVRAMSG*DYVRRQVQKSSASG Trigger: CCCAGAAGCAGAGCTTTTCTGCACCTGTCGTCTCACATAGTCTCATCCGCTCATTGCTCTCACCTTCGCCCTTGATTTCTTTACATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS CCA 90 bp | AACAGGCATGGAGCTGCCATCTCCTGTGATAGCGATGCCTTCTTCTaGAAACCTCTTGATGGACCTGCCTTGTCAGATTTCTGCATAAAA | + |
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Preference number: 5 (lower is better) Translates to: NRHGAAISCDSDAFF*KPLDGPALSDFCIK Trigger: TTTTATGCAGAAATCTGACAAGGCAGGTCCATCAAGAGGTTTCCAGAAGAAGGCATCGCTATCACAGGAGATGGCAGCTCCATGCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CCA 90 bp | ACCACCTTAGGCACATGTTGTCAAGATCTCCCGAGGCTGTGTCACTaGTATGTCCTTAACCTTGGCAAAATAAACTTTCTAAATGGACTG | + |
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Preference number: 5 (lower is better) Translates to: TTLGTCCQDLPRLCH*YVLNLGKINFLNGL Trigger: CAGTCCATTTAGAAAGTTTATTTTGCCAAGGTTAAGGACATACCAGTGACACAGCCTCGGGAGATCTTGACAACATGTGCCTAAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS TCA 90 bp | CTTATCTCAAGCCAGCAGGTCCTGTATGGTTTTGAAGACTGCTGGTaGACCAGTTATTTTGTCAGTAATTCTAATTCCAGGTATTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LISSQQVLYGFEDCW*TSYFVSNSNSRYLF Trigger: AAACAAATACCTGGAATTAGAATTACTGACAAAATAACTGGTTCACCAGCAGTCTTCAAAACCATACAGGACCTGCTGGCTTGAGATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS TCA 72 bp | GTGCAGCCCGAGCCCAGGGGCATCCAGTCTCCTGAATaGACTCCAGGGTCTCCCAGTGGAAGGGACAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQPEPRGIQSPE*TPGSPSGRDKL Trigger: GAGCTTGTCCCTTCCACTGGGAGACCCTGGAGTTCATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS GCA 72 bp | AGCCTGGGAGTGGTGATTCCACAGTGGGGTCCACAGTaGAGCCCGAGCCCAGGGGCATCCAGTCTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLGVVIPQWGPQ*SPSPGASSLLN Trigger: ATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCACTGTGGACCCCACTGTGGAATCACCACTCCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS TCA 72 bp | CACAGTGCAGCCCGAGCCCAGGGGCATCCAGTCTCCTaGATGAACTCCAGGGTCTCCCAGTGGAAGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: HSAARAQGHPVS*MNSRVSQWKGQ Trigger: TTGTCCCTTCCACTGGGAGACCCTGGAGTTCATTCAGGAGACTGGATGCCCCTGGGCTCGGGCTGCACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS TCA 72 bp | TTGTTGCAGAAGTGGAGAACAGATCTGGAACCTGCCTaGGGTCAGCCTGGGAGTGGTGATTCCACAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LLQKWRTDLEPA*GQPGSGDSTVG Trigger: CCCCACTGTGGAATCACCACTCCCAGGCTGACCTCAGGCAGGTTCCAGATCTGTTCTCCACTTCTGCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CAA 90 bp | CCCAGTGGAAGGGACAAGCTCTGCCACTTTCTCCATGAGGTCAGCTaGCACGGAGAGACTCTTAGAATCCCAAGCTTGGTCTGGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSGRDKLCHFLHEVS*HGETLRIPSLVWVF Trigger: GAAAACCCAGACCAAGCTTGGGATTCTAAGAGTCTCTCCGTGCAAGCTGACCTCATGGAGAAAGTGGCAGAGCTTGTCCCTTCCACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS GCA 72 bp | GGGACAAGCTCTGCCACTTTCTCCATGAGGTCAGCTTaGACGGAGAGACTCTTAGAATCCCAAGCTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTSSATFSMRSA*TERLLESQAWS Trigger: AGACCAAGCTTGGGATTCTAAGAGTCTCTCCGTGCAAGCTGACCTCATGGAGAAAGTGGCAGAGCTTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CAA 72 bp | AGGGACAAGCTCTGCCACTTTCTCCATGAGGTCAGCTaGCACGGAGAGACTCTTAGAATCCCAAGCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RDKLCHFLHEVS*HGETLRIPSLV Trigger: GACCAAGCTTGGGATTCTAAGAGTCTCTCCGTGCAAGCTGACCTCATGGAGAAAGTGGCAGAGCTTGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CAA 90 bp | TCTGTGCACAAAAGCACCCAACTCTTAGGGTCAGGATCGTCACTGTaGCTGTCTTCCACCTCCACACCCTGTCCCACTGGAACATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SVHKSTQLLGSGSSL*LSSTSTPCPTGTSS Trigger: TGAAGATGTTCCAGTGGGACAGGGTGTGGAGGTGGAAGACAGCAACAGTGACGATCCTGACCCTAAGAGTTGGGTGCTTTTGTGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS CCA 72 bp | GGAGCTGCCATCTCCTGTGATAGCGATGCCTTCTTCTaGAAACCTCTTGATGGACCTGCCTTGTCAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: GAAISCDSDAFF*KPLDGPALSDF Trigger: GAAATCTGACAAGGCAGGTCCATCAAGAGGTTTCCAGAAGAAGGCATCGCTATCACAGGAGATGGCAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650337.1 ENST00000652919.1 |
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| CDS CAA 72 bp | AAAACCAAGCTGTGCCCCAACCACCTTAGGCACATGTaGTCAAGATCTCCCGAGGCTGTGTCACTGGTATGT | + |
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Preference number: 6 (lower is better) Translates to: KTKLCPNHLRHM*SRSPEAVSLVC Trigger: ACATACCAGTGACACAGCCTCGGGAGATCTTGACAACATGTGCCTAAGGTGGTTGGGGCACAGCTTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS TCA 72 bp | AAGAAATCAAGGGCGAAGGTGAGAGCAATGAGCGGATaGGACTATGTGAGACGACAGGTGCAGAAAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KKSRAKVRAMSG*DYVRRQVQKSS Trigger: AGAGCTTTTCTGCACCTGTCGTCTCACATAGTCTCATCCGCTCATTGCTCTCACCTTCGCCCTTGATTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS GCA 72 bp | TTATCCCTCTGCTCACATGGGACACGCGCATCTGAGTaGTTCCTTTGTTCTGTTGCTTTACTAAGCCAGACT | + |
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Preference number: 6 (lower is better) Translates to: LSLCSHGTRASE*FLCSVALLSQT Trigger: AGTCTGGCTTAGTAAAGCAACAGAACAAAGGAAGCACTCAGATGCGCGTGTCCCATGTGAGCAGAGGGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS TCA 72 bp | AAAGTTATCCCTCTGCTCACATGGGACACGCGCATCTaGGTGCTTCCTTTGTTCTGTTGCTTTACTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KVIPLLTWDTRI*VLPLFCCFTKP Trigger: TGGCTTAGTAAAGCAACAGAACAAAGGAAGCACTCAGATGCGCGTGTCCCATGTGAGCAGAGGGATAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS CCA 72 bp | GGCACATGTTGTCAAGATCTCCCGAGGCTGTGTCACTaGTATGTCCTTAACCTTGGCAAAATAAACTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GTCCQDLPRLCH*YVLNLGKINFL Trigger: TAGAAAGTTTATTTTGCCAAGGTTAAGGACATACCAGTGACACAGCCTCGGGAGATCTTGACAACATGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS TCA 72 bp | AGCCAGCAGGTCCTGTATGGTTTTGAAGACTGCTGGTaGACCAGTTATTTTGTCAGTAATTCTAATTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SQQVLYGFEDCW*TSYFVSNSNSR Trigger: CCTGGAATTAGAATTACTGACAAAATAACTGGTTCACCAGCAGTCTTCAAAACCATACAGGACCTGCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS CCA 72 bp | AGAATGCAACCATTTGTCTCTTATCTACCTCTGACCTaGAAGCCCTCTTTTGGTTTTAAGTTGTCCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RMQPFVSYLPLT*KPSFGFKLSLF Trigger: AAAGAGGGACAACTTAAAACCAAAAGAGGGCTTCCAGGTCAGAGGTAGATAAGAGACAAATGGTTGCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS CAA 90 bp | GTGGAAGGAGGCATTGGCGATCTGACAGATTTTGTGATCTGTAATTaGTATGTCACAAGGTTATTTATGCATAAACTTCAGCTTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VEGGIGDLTDFVICN*YVTRLFMHKLQLAR Trigger: CCTTGCAAGCTGAAGTTTATGCATAAATAACCTTGTGACATACAAATTACAGATCACAAAATCTGTCAGATCGCCAATGCCTCCTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS CAA 72 bp | GGAATTTCAGGTTCAATCTTTAAAAGCCTCTTAAGATaGGAAGCCAGGCCAGCAATTCACCATCAGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: GISGSIFKSLLR*EARPAIHHQIL Trigger: CAAAATCTGATGGTGAATTGCTGGCCTGGCTTCCAATCTTAAGAGGCTTTTAAAGATTGAACCTGAAATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS GCA 72 bp | ATGAGTTCTAAAATCAGACTTCCTGGGATTAATCCCTaGTTATTTCATTATTATATGTGTAACCTGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: MSSKIRLPGINP*LFHYYMCNLRP Trigger: CGGCCTCAGGTTACACATATAATAATGAAATAAGCAGGGATTAATCCCAGGAAGTCTGATTTTAGAACTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652919.1 |
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| CDS TCA 72 bp | GGCATAAGCGACTATTTCTGTAAATTGTGTATTCAGTaGAAGCCTAATCAGAAACTCAAAAGAATGCAACCA | + |
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Preference number: 6 (lower is better) Translates to: GISDYFCKLCIQ*KPNQKLKRMQP Trigger: TGGTTGCATTCTTTTGAGTTTCTGATTAGGCTTTCACTGAATACACAATTTACAGAAATAGTCGCTTATGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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| CDS CAA 72 bp | GGCATTGGCGATCTGACAGATTTTGTGATCTGTAATTaGTATGTCACAAGGTTATTTATGCATAAACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GIGDLTDFVICN*YVTRLFMHKLQ Trigger: CTGAAGTTTATGCATAAATAACCTTGTGACATACAAATTACAGATCACAAAATCTGTCAGATCGCCAATGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650337.1 |
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