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Pregenerated sensors for LINC02716 (Homo sapiens)

Ensembl gene IDs: ENSG00000205106

Ensembl transcript IDs: ENST00000378779.4

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ACCAGCACACAGCTGAGGCCGCCTCTCCCGGAGCCCGGAGGGAGCTaGGTTCCGGTCGCCAGCGGTGCCCGGGTGAGCAGTTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: TSTQLRPPLPEPGGS*VPVASGARVSSSPS
Trigger: TGAGGGTGAACTGCTCACCCGGGCACCGCTGGCGACCGGAACCCAGCTCCCTCCGGGCTCCGGGAGAGGCGGCCTCAGCTGTGTGCTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS TCA 90 bp CGGAGCCCGGAGGGAGCTGGGTTCCGGTCGCCAGCGGTGCCCGGGTaGGCAGTTCACCCTCACGTCCCTGCTCTGACGAAGTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: RSPEGAGFRSPAVPG*AVHPHVPALTKFPF
Trigger: GAATGGAAACTTCGTCAGAGCAGGGACGTGAGGGTGAACTGCTCACCCGGGCACCGCTGGCGACCGGAACCCAGCTCCCTCCGGGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS CCA 90 bp CAAGGTCCCTCCACCTTCACCCTAGAGTCACACAGAGACTTGCCCTaGCGGCTGGTGACAGGTGGGCGGGAGAAGAAAAGGCCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: QGPSTFTLESHRDLP*RLVTGGREKKRPLG
Trigger: CCCCAGGGGCCTTTTCTTCTCCCGCCCACCTGTCACCAGCCGCCAGGGCAAGTCTCTGTGTGACTCTAGGGTGAAGGTGGAGGGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS CCA 90 bp AAACACCAGGTGCCAGAGAGGGTCCCTCACTCATCGGAATCCGGGTaGGATGAATCCTCGGAGGCAAGGTCCCTCCACCTTCACCCTAGA +
Preference number: 5 (lower is better)
Translates to: KHQVPERVPHSSESG*DESSEARSLHLHPR
Trigger: TCTAGGGTGAAGGTGGAGGGACCTTGCCTCCGAGGATTCATCCCACCCGGATTCCGATGAGTGAGGGACCCTCTCTGGCACCTGGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS GCA 72 bp GGAGCCCGGAGGGAGCTGGGTTCCGGTCGCCAGCGGTaGCCGGGTGAGCAGTTCACCCTCACGTCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: GARRELGSGRQR*PGEQFTLTSLL
Trigger: GAGCAGGGACGTGAGGGTGAACTGCTCACCCGGGCACCGCTGGCGACCGGAACCCAGCTCCCTCCGGGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS TCA 72 bp GAGGGAGCTGGGTTCCGGTCGCCAGCGGTGCCCGGGTaGGCAGTTCACCCTCACGTCCCTGCTCTGACGAAG +
Preference number: 6 (lower is better)
Translates to: EGAGFRSPAVPG*AVHPHVPALTK
Trigger: CTTCGTCAGAGCAGGGACGTGAGGGTGAACTGCTCACCCGGGCACCGCTGGCGACCGGAACCCAGCTCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS CAA 90 bp CGGAGGCAAGGTCCCTCCACCTTCACCCTAGAGTCACACAGAGACTaGCCCTGGCGGCTGGTGACAGGTGGGCGGGAGAAGAAAAGGCCC +
Preference number: 6 (lower is better)
Translates to: RRQGPSTFTLESHRD*PWRLVTGGREKKRP
Trigger: GGGCCTTTTCTTCTCCCGCCCACCTGTCACCAGCCGCCAGGGCAAGTCTCTGTGTGACTCTAGGGTGAAGGTGGAGGGACCTTGCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS CCA 72 bp AGTTTCCATTCTTCCAGGGTCATAGAGCCGGTGAGCTaGGGACAGCGCCTGTCAACGCCCCAGAGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SFHSSRVIEPVS*GQRLSTPQSLP
Trigger: TGGAAGGCTCTGGGGCGTTGACAGGCGCTGTCCCCAGCTCACCGGCTCTATGACCCTGGAAGAATGGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS CCA 72 bp TCCACCTTCACCCTAGAGTCACACAGAGACTTGCCCTaGCGGCTGGTGACAGGTGGGCGGGAGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: STFTLESHRDLP*RLVTGGREKKR
Trigger: CCTTTTCTTCTCCCGCCCACCTGTCACCAGCCGCCAGGGCAAGTCTCTGTGTGACTCTAGGGTGAAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378779.4
CDS GCA 72 bp TTTATTAACTGTGAGGCTGGCCATTCAAACACCAGGTaGCAGAGAGGGTCCCTCACTCATCGGAATCCGGGT +
Preference number: 6 (lower is better)
Translates to: FINCEAGHSNTR*QRGSLTHRNPG
Trigger: ACCCGGATTCCGATGAGTGAGGGACCCTCTCTGGCACCTGGTGTTTGAATGGCCAGCCTCACAGTTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378779.4