Pregenerated sensors for LINC02712 (Homo sapiens)

Ensembl gene IDs: ENSG00000273409

Ensembl transcript IDs: ENST00000608214.2, ENST00000637808.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCCTTGGGTTTGGATTTCAGTAGAATCTGCATCTTGGGAGGACTCTaGGTCAGTCTGCTACACTCCGATGCCTATGTTTTCAGAGCTAAG	+
Preference number: 5 (lower is better) Translates to: PLGLDFSRICILGGL*VSLLHSDAYVFRAK Trigger: CTTAGCTCTGAAAACATAGGCATCGGAGTGTAGCAGACTGACTCAGAGTCCTCCCAAGATGCAGATTCTACTGAAATCCAAACCCAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608214.2 ENST00000637808.1
CDS TCA 72 bp	CTGCTACACTCCGATGCCTATGTTTTCAGAGCTAAGTaGCACCCAGAGCAGGAAGAGATGGCAGACGTGCTA	+
Preference number: 6 (lower is better) Translates to: LLHSDAYVFRAK*HPEQEEMADVL Trigger: TAGCACGTCTGCCATCTCTTCCTGCTCTGGGTGTCACTTAGCTCTGAAAACATAGGCATCGGAGTGTAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608214.2 ENST00000637808.1
CDS CCA 72 bp	ACCCCTTGGGTTTGGATTTCAGTAGAATCTGCATCTTaGGAGGACTCTGAGTCAGTCTGCTACACTCCGATG	+
Preference number: 6 (lower is better) Translates to: TPWVWISVESAS*EDSESVCYTPM Trigger: CATCGGAGTGTAGCAGACTGACTCAGAGTCCTCCCAAGATGCAGATTCTACTGAAATCCAAACCCAAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608214.2 ENST00000637808.1
CDS TCA 72 bp	TTGGATTTCAGTAGAATCTGCATCTTGGGAGGACTCTaGGTCAGTCTGCTACACTCCGATGCCTATGTTTTC	+
Preference number: 6 (lower is better) Translates to: LDFSRICILGGL*VSLLHSDAYVF Trigger: GAAAACATAGGCATCGGAGTGTAGCAGACTGACTCAGAGTCCTCCCAAGATGCAGATTCTACTGAAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608214.2 ENST00000637808.1
CDS CCA 72 bp	CATTTCTGGGGGAAATTATGGATGTGCAAGGTAGACTaGAGAAACTGGAATAGACATCTCTATGGAGCCTCT	+
Preference number: 6 (lower is better) Translates to: HFWGKLWMCKVD*RNWNRHLYGAS Trigger: AGAGGCTCCATAGAGATGTCTATTCCAGTTTCTCCAGTCTACCTTGCACATCCATAATTTCCCCCAGAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637808.1
CDS CAA 72 bp	AGAGTAAGACATTTCACATCCCATTTTGTAGACCCCTaGGGTTTGGATTTCAGTAGAATCTGCATCTTGGGA	+
Preference number: 6 (lower is better) Translates to: RVRHFTSHFVDP*GLDFSRICILG Trigger: TCCCAAGATGCAGATTCTACTGAAATCCAAACCCAAGGGGTCTACAAAATGGGATGTGAAATGTCTTACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637808.1

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