Pregenerated sensors for LINC02709 (Homo sapiens)
Ensembl gene IDs: ENSG00000245522Ensembl transcript IDs: ENST00000500698.1, ENST00000525154.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGACAACCTCTGGGCCTGGTCTCGTGTGTGCACCTGGGACCGGTaGGTGAGGGGTGATGTAGAGTCAATGAGGGACGAGCTCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ADNLWAWSRVCTWDR*VRGDVESMRDELAE Trigger: CTCAGCGAGCTCGTCCCTCATTGACTCTACATCACCCCTCACCCACCGGTCCCAGGTGCACACACGAGACCAGGCCCAGAGGTTGTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500698.1 |
||
| CDS CCA 90 bp | GAAATGCATACGCTTTCGAGGGAAGGAGGGGAGGAAACGACCCTGTaGCGCAGGTCTGCACGGCCAAGGGGGTTCCCTGAGCTGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EMHTLSREGGEETTL*RRSARPRGFPELVE Trigger: CTCCACCAGCTCAGGGAACCCCCTTGGCCGTGCAGACCTGCGCCACAGGGTCGTTTCCTCCCCTCCTTCCCTCGAAAGCGTATGCATTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525154.1 |
||
| CDS TCA 90 bp | GGCCTGTCGCTGGTGGGCTGGCCGGTTCTGAGAAGATCTGGCAGGTaGCTGCGGTTGGTCAGCCATTCAAGGCTACTACTGGAGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GLSLVGWPVLRRSGR*LRLVSHSRLLLESP Trigger: CGGACTCTCCAGTAGTAGCCTTGAATGGCTGACCAACCGCAGTCACCTGCCAGATCTTCTCAGAACCGGCCAGCCCACCAGCGACAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 90 bp | TCTCACTCTGCAGACAACCTCTGGGCCTGGTCTCGTGTGTGCACCTaGGACCGGTGGGTGAGGGGTGATGTAGAGTCAATGAGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHSADNLWAWSRVCT*DRWVRGDVESMRDE Trigger: CTCGTCCCTCATTGACTCTACATCACCCCTCACCCACCGGTCCCAGGTGCACACACGAGACCAGGCCCAGAGGTTGTCTGCAGAGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500698.1 |
||
| CDS TCA 90 bp | CTAGAGCTGTTGCCCTCCCAGCCTGGGCTACAAACAATCAGTGCTTaGATCTTCCTGCCTACCCCCACCCCAATCAGGCCTTTAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LELLPSQPGLQTISA*IFLPTPTPIRPLGH Trigger: GTGCCCTAAAGGCCTGATTGGGGTGGGGGTAGGCAGGAAGATTCAAGCACTGATTGTTTGTAGCCCAGGCTGGGAGGGCAACAGCTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 90 bp | GATCTGGCAGGTGACTGCGGTTGGTCAGCCATTCAAGGCTACTACTaGAGAGTCCGGGAAATACCTCAGGTGCTCTCTGCATTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DLAGDCGWSAIQGYY*RVREIPQVLSAFPQ Trigger: CTGTGGAAATGCAGAGAGCACCTGAGGTATTTCCCGGACTCTCCAGTAGTAGCCTTGAATGGCTGACCAACCGCAGTCACCTGCCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 90 bp | AGGCCTTTGTGTTTATATCCCCCTCAACAGTTCACAAGGGCCAGCTaGGGTCCAGCAGGACTTCAGGAGTGGGTAGACGAAAGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLCLYPPQQFTRAS*GPAGLQEWVDESSV Trigger: GACAGAGCTTTCGTCTACCCACTCCTGAAGTCCTGCTGGACCTCAGCTGGCCCTTGTGAACTGTTGAGGGGGATATAAACACAAAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 90 bp | GCTCAGCTTCCATTGAGTCTTCTGAGGCTGCCGAGTCTTTGGCCCTaGGTAGTGGATACATCTGTGGTGGACACTAAATTCCAAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AQLPLSLLRLPSLWP*VVDTSVVDTKFQAG Trigger: CCCTGCTTGGAATTTAGTGTCCACCACAGATGTATCCACTACCCAGGGCCAAAGACTCGGCAGCCTCAGAAGACTCAATGGAAGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 90 bp | CACACAGGCAGTCCATGGTCTCTTAGGATTGTGCACCCACAGGAATaGAGGCCTTTGTGTTTATATCCCCCTCAACAGTTCACAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTGSPWSLRIVHPQE*RPLCLYPPQQFTRA Trigger: GGCCCTTGTGAACTGTTGAGGGGGATATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 90 bp | TCCTGTTCCCACCACACACAGGCAGTCCATGGTCTCTTAGGATTGTaGACCCACAGGAATGCAGGCCTTTGTGTTTATATCCCCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCSHHTQAVHGLLGL*THRNAGLCVYIPLN Trigger: GTTGAGGGGGATATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTGTGGTGGGAACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 90 bp | AAACATTTAATTTCTCAGTGCCCCATCACCCAGCTAGTGGCCATGTaGCACCCCTACATACAGAGGAGGGCCCTGACCCTTTCTAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLISQCPITQLVAM*HPYIQRRALTLSSP Trigger: AGGACTAGAAAGGGTCAGGGCCCTCCTCTGTATGTAGGGGTGGCACATGGCCACTAGCTGGGTGATGGGGCACTGAGAAATTAAATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 90 bp | TCCTGTGCTCAGCTTCCATTGAGTCTTCTGAGGCTGCCGAGTCTTTaGCCCTGGGTAGTGGATACATCTGTGGTGGACACTAAATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SCAQLPLSLLRLPSL*PWVVDTSVVDTKFQ Trigger: TTGGAATTTAGTGTCCACCACAGATGTATCCACTACCCAGGGCCAAAGACTCGGCAGCCTCAGAAGACTCAATGGAAGCTGAGCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | GGCGCAGGTCTGCACGGCCAAGGGGGTTCCCTGAGCTaGTGGAGCGGCGTGGCGTGGCCTAGGAAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGLHGQGGSLS*WSGVAWPRKSL Trigger: CAGGGACTTCCTAGGCCACGCCACGCCGCTCCACCAGCTCAGGGAACCCCCTTGGCCGTGCAGACCTGCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525154.1 |
||
| CDS TCA 72 bp | CCTGTGGCGCAGGTCTGCACGGCCAAGGGGGTTCCCTaGGCTGGTGGAGCGGCGTGGCGTGGCCTAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PVAQVCTAKGVP*AGGAAWRGLGS Trigger: ACTTCCTAGGCCACGCCACGCCGCTCCACCAGCTCAGGGAACCCCCTTGGCCGTGCAGACCTGCGCCACAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525154.1 |
||
| CDS CCA 72 bp | ACGCTTTCGAGGGAAGGAGGGGAGGAAACGACCCTGTaGCGCAGGTCTGCACGGCCAAGGGGGTTCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLSREGGEETTL*RRSARPRGFPE Trigger: CTCAGGGAACCCCCTTGGCCGTGCAGACCTGCGCCACAGGGTCGTTTCCTCCCCTCCTTCCCTCGAAAGCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525154.1 |
||
| CDS CCA 72 bp | CTCTGGGCCTGGTCTCGTGTGTGCACCTGGGACCGGTaGGTGAGGGGTGATGTAGAGTCAATGAGGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LWAWSRVCTWDR*VRGDVESMRDE Trigger: CTCGTCCCTCATTGACTCTACATCACCCCTCACCCACCGGTCCCAGGTGCACACACGAGACCAGGCCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500698.1 |
||
| CDS CCA 72 bp | TTAGAAAGTCACGTGGAGGGGGTTTTCCATCTGGGCTaGGCCAGGCCACTTAATGGGCCTGTCGCTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LESHVEGVFHLG*ARPLNGPVAGG Trigger: CCCACCAGCGACAGGCCCATTAAGTGGCCTGGCCCAGCCCAGATGGAAAACCCCCTCCACGTGACTTTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | CCTCCGACAACACTTTCTGCTTGGACCAGCAGCCCATaGGGGTTTCAGGGAGCAGTCTCCCTGCCCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PPTTLSAWTSSP*GFQGAVSLPHF Trigger: AAAGTGGGGCAGGGAGACTGCTCCCTGAAACCCCCATGGGCTGCTGGTCCAAGCAGAAAGTGTTGTCGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 72 bp | CTGGTGGGCTGGCCGGTTCTGAGAAGATCTGGCAGGTaGCTGCGGTTGGTCAGCCATTCAAGGCTACTACTG | + |
|
Preference number: 6 (lower is better) Translates to: LVGWPVLRRSGR*LRLVSHSRLLL Trigger: CAGTAGTAGCCTTGAATGGCTGACCAACCGCAGTCACCTGCCAGATCTTCTCAGAACCGGCCAGCCCACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 72 bp | ATTTCTCAGTGCCCCATCACCCAGCTAGTGGCCATGTaGCACCCCTACATACAGAGGAGGGCCCTGACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ISQCPITQLVAM*HPYIQRRALTL Trigger: AAGGGTCAGGGCCCTCCTCTGTATGTAGGGGTGGCACATGGCCACTAGCTGGGTGATGGGGCACTGAGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 90 bp | TCTAGAGCTGTTGCCCTCCCAGCCTGGGCTACAAACAATCAGTGCTaGAATCTTCCTGCCTACCCCCACCCCAATCAGGCCTTTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRAVALPAWATNNQC*NLPAYPHPNQAFRA Trigger: TGCCCTAAAGGCCTGATTGGGGTGGGGGTAGGCAGGAAGATTCAAGCACTGATTGTTTGTAGCCCAGGCTGGGAGGGCAACAGCTCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | GGTGACTGCGGTTGGTCAGCCATTCAAGGCTACTACTaGAGAGTCCGGGAAATACCTCAGGTGCTCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GDCGWSAIQGYY*RVREIPQVLSA Trigger: TGCAGAGAGCACCTGAGGTATTTCCCGGACTCTCCAGTAGTAGCCTTGAATGGCTGACCAACCGCAGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 90 bp | AGTGAGGGTGGGAGGCGGGTGGCTGTAAACTGGGAAGGGACACACTaGAACTTTCTGGGATGCTGTCAATGGGTGGTGGTTACACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SEGGRRVAVNWEGTH*NFLGCCQWVVVTQE Trigger: TTCCTGTGTAACCACCACCCATTGACAGCATCCCAGAAAGTTCAAGTGTGTCCCTTCCCAGTTTACAGCCACCCGCCTCCCACCCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500698.1 |
||
| CDS CCA 72 bp | TACCCCCACCCCAATCAGGCCTTTAGGGCACTAAGTTaGAAAGGAGCCTGGACTTCAGAGTCAAACAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YPHPNQAFRALS*KGAWTSESNRP Trigger: AGGCCTGTTTGACTCTGAAGTCCAGGCTCCTTTCCAACTTAGTGCCCTAAAGGCCTGATTGGGGTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | CTCCTTTTCCTGTTCCCACCACACACAGGCAGTCCATaGTCTCTTAGGATTGTGCACCCACAGGAATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLFLFPPHTGSP*SLRIVHPQECR Trigger: CCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTGTGGTGGGAACAGGAAAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | CAGCTTCCATTGAGTCTTCTGAGGCTGCCGAGTCTTTaGCCCTGGGTAGTGGATACATCTGTGGTGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: QLPLSLLRLPSL*PWVVDTSVVDT Trigger: AGTGTCCACCACAGATGTATCCACTACCCAGGGCCAAAGACTCGGCAGCCTCAGAAGACTCAATGGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 72 bp | TGTTTATATCCCCCTCAACAGTTCACAAGGGCCAGCTaGGGTCCAGCAGGACTTCAGGAGTGGGTAGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLYPPQQFTRAS*GPAGLQEWVDE Trigger: TTCGTCTACCCACTCCTGAAGTCCTGCTGGACCTCAGCTGGCCCTTGTGAACTGTTGAGGGGGATATAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 72 bp | AAGGTGACACGTGAAATCTGTACCGGACTTCTAGGATaGTGTTCATTACACCACCCACCTCCTCTCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KVTREICTGLLG*CSLHHPPPLGS Trigger: GGACCCGAGAGGAGGTGGGTGGTGTAATGAACAGCATCCTAGAAGTCCGGTACAGATTTCACGTGTCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 90 bp | TTTTCCTGTTCCCACCACACACAGGCAGTCCATGGTCTCTTAGGATaGTGCACCCACAGGAATGCAGGCCTTTGTGTTTATATCCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSCSHHTQAVHGLLG*CTHRNAGLCVYIPL Trigger: GAGGGGGATATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTGTGGTGGGAACAGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | CCATTGAGTCTTCTGAGGCTGCCGAGTCTTTGGCCCTaGGTAGTGGATACATCTGTGGTGGACACTAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: PLSLLRLPSLWP*VVDTSVVDTKF Trigger: GAATTTAGTGTCCACCACAGATGTATCCACTACCCAGGGCCAAAGACTCGGCAGCCTCAGAAGACTCAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 72 bp | TCCCACCACACACAGGCAGTCCATGGTCTCTTAGGATaGTGCACCCACAGGAATGCAGGCCTTTGTGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SHHTQAVHGLLG*CTHRNAGLCVY Trigger: ATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTGTGGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 90 bp | CAGGTGATGTGTCCTCAGGGTGTCACACCTGAGGCACCTGGTGTTTaGTCTTCATGCATGTTCTTTAGAAAGTCACGTGGAGGGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QVMCPQGVTPEAPGV*SSCMFFRKSRGGGF Trigger: AAAACCCCCTCCACGTGACTTTCTAAAGAACATGCATGAAGACAAAACACCAGGTGCCTCAGGTGTGACACCCTGAGGACACATCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 90 bp | CAAACAGGCCTGGGCTCTACTGTGGTTTTACCTTACTGTGTCATCTaGGGTGGGTTAGGATACTGTACAGGTGATGTGTCCTCAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QTGLGSTVVLPYCVI*GGLGYCTGDVSSGC Trigger: ACACCCTGAGGACACATCACCTGTACAGTATCCTAACCCACCCAAGATGACACAGTAAGGTAAAACCACAGTAGAGCCCAGGCCTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 72 bp | AGTGCACAGCCTTCCAGGCCTACATTTAGGTTTGTTTaGAACAGGAACATGCGGTTCAACCGCCAACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAQPSRPTFRFV*NRNMRFNRQPE Trigger: CTCAGGTTGGCGGTTGAACCGCATGTTCCTGTTTCAAACAAACCTAAATGTAGGCCTGGAAGGCTGTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525154.1 |
||
| CDS GCA 72 bp | CACCACACACAGGCAGTCCATGGTCTCTTAGGATTGTaGACCCACAGGAATGCAGGCCTTTGTGTTTATATC | + |
|
Preference number: 6 (lower is better) Translates to: HHTQAVHGLLGL*THRNAGLCVYI Trigger: GATATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGACCATGGACTGCCTGTGTGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS GCA 72 bp | TCACACCCAGGATTTGTGCAGTTTACCGTCTGTAACTaGAGTGCCTCTAGAAGCCTGAACTGGCTCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SHPGFVQFTVCN*SASRSLNWLTF Trigger: AAAGGTGAGCCAGTTCAGGCTTCTAGAGGCACTGCAGTTACAGACGGTAAACTGCACAAATCCTGGGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500698.1 |
||
| CDS CAA 72 bp | TCTCTTAGGATTGTGCACCCACAGGAATGCAGGCCTTaGTGTTTATATCCCCCTCAACAGTTCACAAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRIVHPQECRP*CLYPPQQFTRA Trigger: GGCCCTTGTGAACTGTTGAGGGGGATATAAACACAAAGGCCTGCATTCCTGTGGGTGCACAATCCTAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 72 bp | TACTGTACAGGTGATGTGTCCTCAGGGTGTCACACCTaGGGCACCTGGTGTTTTGTCTTCATGCATGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCTGDVSSGCHT*GTWCFVFMHVL Trigger: AAGAACATGCATGAAGACAAAACACCAGGTGCCTCAGGTGTGACACCCTGAGGACACATCACCTGTACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CCA 72 bp | TTGGAAAGGAGCCTGGACTTCAGAGTCAAACAGGCCTaGGCTCTACTGTGGTTTTACCTTACTGTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LERSLDFRVKQA*ALLWFYLTVSS Trigger: AGATGACACAGTAAGGTAAAACCACAGTAGAGCCCAGGCCTGTTTGACTCTGAAGTCCAGGCTCCTTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS CAA 72 bp | CTGGGCTCTACTGTGGTTTTACCTTACTGTGTCATCTaGGGTGGGTTAGGATACTGTACAGGTGATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTVVLPYCVI*GGLGYCTGDVS Trigger: GGACACATCACCTGTACAGTATCCTAACCCACCCAAGATGACACAGTAAGGTAAAACCACAGTAGAGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||
| CDS TCA 72 bp | CTTTCAATTTCAGATAAGGAACTAGAAGGTGACACGTaGAATCTGTACCGGACTTCTAGGATGCTGTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSISDKELEGDT*NLYRTSRMLFI Trigger: AATGAACAGCATCCTAGAAGTCCGGTACAGATTTCACGTGTCACCTTCTAGTTCCTTATCTGAAATTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500698.1 ENST00000525154.1 |
||