Pregenerated sensors for LINC02704 (Homo sapiens)
Ensembl gene IDs: ENSG00000255079Ensembl transcript IDs: ENST00000532748.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AACATTAACCAGCACTTGCATCTGTCTGTGGGCTTCTTCCCTGTCTaGCCATCAGCCTCCCCTACCCAAGGAAGCCACTATCCTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: NINQHLHLSVGFFPV*PSASPTQGSHYPEA Trigger: AGCTTCAGGATAGTGGCTTCCTTGGGTAGGGGAGGCTGATGGTCAGACAGGGAAGAAGCCCACAGACAGATGCAAGTGCTGGTTAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CCA 90 bp | CTTTCTGTAGGTCACATGATCATCCCTAAACAAATCACTGTGGCCTaGGGGACAGAACAGGCTGATTGGCCAGGTCTGGATCAGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: LSVGHMIIPKQITVA*GTEQADWPGLDQVI Trigger: GATCACCTGATCCAGACCTGGCCAATCAGCCTGTTCTGTCCCCCAGGCCACAGTGATTTGTTTAGGGATGATCATGTGACCTACAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS GCA 90 bp | AAGACCTGGTCATCCAACACAAGAATCAGAACATTAACCAGCACTTaGATCTGTCTGTGGGCTTCTTCCCTGTCTGACCATCAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: KTWSSNTRIRTLTST*ICLWASSLSDHQPP Trigger: GGGAGGCTGATGGTCAGACAGGGAAGAAGCCCACAGACAGATGCAAGTGCTGGTTAATGTTCTGATTCTTGTGTTGGATGACCAGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CCA 72 bp | CCCATGCAATGCACGTGGGTGGAGGGGAGTGAGGGTTaGGTGGTTTCCCAAAGGCAATCTGAAGGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PMQCTWVEGSEG*VVSQRQSEGPG Trigger: CCCTGGCCCTTCAGATTGCCTTTGGGAAACCACCCAACCCTCACTCCCCTCCACCCACGTGCATTGCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CAA 72 bp | GCCATCAACCGCACTTTGTCCCAGGCTCAGTGTCACTaGAACCAAGTCTTCCCACAGCACCACAGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AINRTLSQAQCH*NQVFPQHHRAQ Trigger: CTGAGCCCTGTGGTGCTGTGGGAAGACTTGGTTCAAGTGACACTGAGCCTGGGACAAAGTGCGGTTGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CCA 72 bp | AGCTCCTGCAAGGTGCTCAGCATAGTGACTGGCACATaGCGAAGGCTCACGAGTGAGGGCCCTTTTCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSCKVLSIVTGT*RRLTSEGPFQD Trigger: ATCTTGAAAAGGGCCCTCACTCGTGAGCCTTCGCCATGTGCCAGTCACTATGCTGAGCACCTTGCAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CAA 90 bp | AAAACAAGAGCCATCAACCGCACTTTGTCCCAGGCTCAGTGTCACTaGAACCAAGTCTTCCCACAGCACCACAGGGCTCAGGCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: KTRAINRTLSQAQCH*NQVFPQHHRAQACP Trigger: AGGGCAAGCCTGAGCCCTGTGGTGCTGTGGGAAGACTTGGTTCAAGTGACACTGAGCCTGGGACAAAGTGCGGTTGATGGCTCTTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CAA 90 bp | AGGCAATCTGAAGGGCCAGGGAAAACAAGAGCCATCAACCGCACTTaGTCCCAGGCTCAGTGTCACTTGAACCAAGTCTTCCCACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RQSEGPGKTRAINRT*SQAQCHLNQVFPQH Trigger: GTGCTGTGGGAAGACTTGGTTCAAGTGACACTGAGCCTGGGACAAAGTGCGGTTGATGGCTCTTGTTTTCCCTGGCCCTTCAGATTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS TCA 72 bp | GGACAGAACAGGCTGATTGGCCAGGTCTGGATCAGGTaGTCATACTTGGAGTCAGGGCCTGGGGTAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: GQNRLIGQVWIR*SYLESGPGVEL Trigger: TAATTCTACCCCAGGCCCTGACTCCAAGTATGATCACCTGATCCAGACCTGGCCAATCAGCCTGTTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS CAA 72 bp | GAAGGGCCAGGGAAAACAAGAGCCATCAACCGCACTTaGTCCCAGGCTCAGTGTCACTTGAACCAAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EGPGKTRAINRT*SQAQCHLNQVF Trigger: GAAGACTTGGTTCAAGTGACACTGAGCCTGGGACAAAGTGCGGTTGATGGCTCTTGTTTTCCCTGGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS GCA 72 bp | TCATCCAACACAAGAATCAGAACATTAACCAGCACTTaGATCTGTCTGTGGGCTTCTTCCCTGTCTGACCAT | + |
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Preference number: 6 (lower is better) Translates to: SSNTRIRTLTST*ICLWASSLSDH Trigger: ATGGTCAGACAGGGAAGAAGCCCACAGACAGATGCAAGTGCTGGTTAATGTTCTGATTCTTGTGTTGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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| CDS GCA 72 bp | TCTATTAATCATGATCCCTTATTCACGCCATCCTCTTaGCATAGGTTCATAAACGGTTCTCCTCTGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: SINHDPLFTPSS*HRFINGSPLFI Trigger: AATAAACAGAGGAGAACCGTTTATGAACCTATGGCAAGAGGATGGCGTGAATAAGGGATCATGATTAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532748.1 |
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