Pregenerated sensors for LINC02703 (Homo sapiens)
Ensembl gene IDs: ENSG00000257067Ensembl transcript IDs: ENST00000537491.5, ENST00000539222.1, ENST00000653503.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGGAGTCGAGAAGTCCGGTGACTCACCACAGGCTACCAGCCATGTaGTGGCGCTTCATCACGTTGTCCTTCTGTGTGCCCAGCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: WESRSPVTHHRLPAM*WRFITLSFCVPSTL Trigger: CAAAGTGCTGGGCACACAGAAGGACAACGTGATGAAGCGCCATCACATGGCTGGTAGCCTGTGGTGAGTCACCGGACTTCTCGACTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537491.5 ENST00000653503.1 |
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| CDS GCA 90 bp | CTTCGGGGTTGTTCACTCCACAATTTCACAGATTGTTTCCAATCATaGGGGCGCAGCCCGAGTTGCAGAGCGTTGTGGTTACTGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LRGCSLHNFTDCFQS*GRSPSCRALWLLFL Trigger: AAGGAACAGTAACCACAACGCTCTGCAACTCGGGCTGCGCCCGCATGATTGGAAACAATCTGTGAAATTGTGGAGTGAACAACCCCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 90 bp | TGCTGTAAGCAGAGAGACACTGCCTTGCAAGGACTTGGAAAGACATaGGACAAGAATCCTCACCCGATCATGAACATAATGAGGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: CCKQRDTALQGLGKT*DKNPHPIMNIMRGS Trigger: ACTGCCCCTCATTATGTTCATGATCGGGTGAGGATTCTTGTCTCATGTCTTTCCAAGTCCTTGCAAGGCAGTGTCTCTCTGCTTACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 90 bp | ATGGTGTCCTATCTGTCTTGGAACCCAACGAGTCCACCATGTGATTaGTGGTGTTCCACTGGTAGGTGCTCAAATAAATGTGGATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: MVSYLSWNPTSPPCD*WCSTGRCSNKCGCP Trigger: GGGACATCCACATTTATTTGAGCACCTACCAGTGGAACACCATCAATCACATGGTGGACTCGTTGGGTTCCAAGACAGATAGGACACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS GCA 90 bp | TTTCACCTTCTGGCCACTCTTTATCCATTTCCTGCTGGAATAGAATaGTGTAAGCAGAGAGACACTGCCTTGCAAGGACTTGGAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: FHLLATLYPFPAGIE*CKQRDTALQGLGKT Trigger: TGTCTTTCCAAGTCCTTGCAAGGCAGTGTCTCTCTGCTTACAGCATTCTATTCCAGCAGGAAATGGATAAAGAGTGGCCAGAAGGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 72 bp | AGAAGTCCGGTGACTCACCACAGGCTACCAGCCATGTaGTGGCGCTTCATCACGTTGTCCTTCTGTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSPVTHHRLPAM*WRFITLSFCVP Trigger: GGGCACACAGAAGGACAACGTGATGAAGCGCCATCACATGGCTGGTAGCCTGTGGTGAGTCACCGGACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537491.5 ENST00000653503.1 |
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| CDS CCA 72 bp | AGCGTTGTGGTTACTGTTCCTTCCACCCTAGTGAGGTaGGAGTCGAGAAGTCCGGTGACTCACCACAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SVVVTVPSTLVR*ESRSPVTHHRL Trigger: TAGCCTGTGGTGAGTCACCGGACTTCTCGACTCCCACCTCACTAGGGTGGAAGGAACAGTAACCACAACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537491.5 ENST00000653503.1 |
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| CDS CAA 72 bp | CACAGATTGTTTCCAATCATGCGGGCGCAGCCCGAGTaGCAGAGCGTTGTGGTTACTGTTCCTTCCACCCTA | + |
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Preference number: 6 (lower is better) Translates to: HRLFPIMRAQPE*QSVVVTVPSTL Trigger: TAGGGTGGAAGGAACAGTAACCACAACGCTCTGCAACTCGGGCTGCGCCCGCATGATTGGAAACAATCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537491.5 ENST00000653503.1 |
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| CDS CAA 90 bp | AAGGCATTTCACAGATTGTTTCCAATCATGCGGGCGCAGCCCGAGTaGCAGAGCGTTGTGGTTACTGTTCCTTCCACCCTAGTGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KAFHRLFPIMRAQPE*QSVVVTVPSTLVRW Trigger: CCACCTCACTAGGGTGGAAGGAACAGTAACCACAACGCTCTGCAACTCGGGCTGCGCCCGCATGATTGGAAACAATCTGTGAAATGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537491.5 |
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| CDS CAA 90 bp | CCACAATTTCACAGATTGTTTCCAATCATGCGGGCGCAGCCCGAGTaGCAGAGCGTTGTGGTTACTGTTCCTTCCACCCTAGTGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PQFHRLFPIMRAQPE*QSVVVTVPSTLVRW Trigger: CCACCTCACTAGGGTGGAAGGAACAGTAACCACAACGCTCTGCAACTCGGGCTGCGCCCGCATGATTGGAAACAATCTGTGAAATTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS CCA 72 bp | CTGATGCTCTTGACTCTCTGTTCCAGCACTCTACACTaGTCCAAGCTGTTTCCAAACACACTGGAGACAGTA | + |
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Preference number: 6 (lower is better) Translates to: LMLLTLCSSTLH*SKLFPNTLETV Trigger: TACTGTCTCCAGTGTGTTTGGAAACAGCTTGGACCAGTGTAGAGTGCTGGAACAGAGAGTCAAGAGCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 72 bp | CAGAGAGACACTGCCTTGCAAGGACTTGGAAAGACATaGGACAAGAATCCTCACCCGATCATGAACATAATG | + |
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Preference number: 6 (lower is better) Translates to: QRDTALQGLGKT*DKNPHPIMNIM Trigger: CATTATGTTCATGATCGGGTGAGGATTCTTGTCTCATGTCTTTCCAAGTCCTTGCAAGGCAGTGTCTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 72 bp | GTAGACTTCAGCTGGGGAGAACGTTATAAACTCGAATaGAGGACAGGACCATACAGAAAGTGGATTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VDFSWGERYKLE*RTGPYRKWIVL Trigger: GAGAACAATCCACTTTCTGTATGGTCCTGTCCTTCATTCGAGTTTATAACGTTCTCCCCAGCTGAAGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537491.5 ENST00000539222.1 |
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| CDS TCA 72 bp | TATCTGTCTTGGAACCCAACGAGTCCACCATGTGATTaGTGGTGTTCCACTGGTAGGTGCTCAAATAAATGT | + |
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Preference number: 6 (lower is better) Translates to: YLSWNPTSPPCD*WCSTGRCSNKC Trigger: ACATTTATTTGAGCACCTACCAGTGGAACACCATCAATCACATGGTGGACTCGTTGGGTTCCAAGACAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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| CDS TCA 72 bp | TCAGCACAATGTCCACAACAACGTTATAAACTCGAATaGAGGACAGGACCATACAGAAAGTGGATTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAQCPQQRYKLE*RTGPYRKWIVL Trigger: GAGAACAATCCACTTTCTGTATGGTCCTGTCCTTCATTCGAGTTTATAACGTTGTTGTGGACATTGTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653503.1 |
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