Pregenerated sensors for LINC02702 (Homo sapiens)
Ensembl gene IDs: ENSG00000237937Ensembl transcript IDs: ENST00000439483.2, ENST00000444123.5, ENST00000665087.1, ENST00000669244.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCTTCTCCTTTCTCTTCTGAAGACACTTCCTTCCTATGCCTGGTaGTCAGGACTGGGATTCGCTCCGCAGGTGCTGGGCAGGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLLSLLKTLPSYAW*SGLGFAPQVLGRPV Trigger: CACAGGCCTGCCCAGCACCTGCGGAGCGAATCCCAGTCCTGAGCACCAGGCATAGGAAGGAAGTGTCTTCAGAAGAGAAAGGAGAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 90 bp | CTTCCTATGCCTGGTGCTCAGGACTGGGATTCGCTCCGCAGGTGCTaGGCAGGCCTGTGTTTAGATTTCCCCTTCCTCCTAACCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LPMPGAQDWDSLRRC*AGLCLDFPFLLTCK Trigger: CTTGCAGGTTAGGAGGAAGGGGAAATCTAAACACAGGCCTGCCCAGCACCTGCGGAGCGAATCCCAGTCCTGAGCACCAGGCATAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 90 bp | TGCTCCATAAGCCTCTTATCCTCCTCTGGGACCACCAGCCTAACCTaGCATGATTCTCTTCTCTTCCTGGAGGGCCCAAGCAGACCTCTG | + |
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Preference number: 5 (lower is better) Translates to: CSISLLSSSGTTSLT*HDSLLFLEGPSRPL Trigger: CAGAGGTCTGCTTGGGCCCTCCAGGAAGAGAAGAGAATCATGCCAGGTTAGGCTGGTGGTCCCAGAGGAGGATAAGAGGCTTATGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669244.1 |
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| CDS TCA 90 bp | GTATCCCGGAGAAGTATGAGCACCACCAGCAGATGGGGTGGTAGCTaGTGCCTATACTTGAGCATCTGTGGCACCTTTCCTGCGTATGGC | + |
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Preference number: 5 (lower is better) Translates to: VSRRSMSTTSRWGGS*CLYLSICGTFPAYG Trigger: GCCATACGCAGGAAAGGTGCCACAGATGCTCAAGTATAGGCATCAGCTACCACCCCATCTGCTGGTGGTGCTCATACTTCTCCGGGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS TCA 90 bp | CATAAGCCTCTTATCCTCCTCTGGGACCACCAGCCTAACCTGGCATaGTTCTCTGCAAGGACCTTTGTAAAGCACTGGCCCATGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: HKPLILLWDHQPNLA*FSARTFVKHWPMGT Trigger: TGTTCCCATGGGCCAGTGCTTTACAAAGGTCCTTGCAGAGAATCATGCCAGGTTAGGCTGGTGGTCCCAGAGGAGGATAAGAGGCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439483.2 |
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| CDS GCA 90 bp | CTGAAGGGATACAGAGATTTTTCTCCCTTTTGCTGGCAGCTGCCATaGAGATGTGACACTTCAAGGCTTAAGAGCAGTGCTGACCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LKGYRDFSPFCWQLP*RCDTSRLKSSADPV Trigger: TACAGGGTCAGCACTGCTCTTAAGCCTTGAAGTGTCACATCTGCATGGCAGCTGCCAGCAAAAGGGAGAAAAATCTCTGTATCCCTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 90 bp | CCGTGTGTTCTTGTATCTCTGAGCCCGCAAGCCCTGGCACAGGACTaGCAGCTCACAGGTAAATACATGTTGAATATGGAATGTAAACTC | + |
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Preference number: 5 (lower is better) Translates to: PCVLVSLSPQALAQD*QLTGKYMLNMECKL Trigger: GAGTTTACATTCCATATTCAACATGTATTTACCTGTGAGCTGCCAGTCCTGTGCCAGGGCTTGCGGGCTCAGAGATACAAGAACACACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS TCA 90 bp | TATATGCATCTGCATTCAGTGCCTGGCCCTGCATCGGATAGTCACTaGGGGCCCATTTTGTCCATGGCATCATGCTCTTTACATCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: YMHLHSVPGPASDSH*GPILSMASCSLHQK Trigger: TTTCTGATGTAAAGAGCATGATGCCATGGACAAAATGGGCCCTCAGTGACTATCCGATGCAGGGCCAGGCACTGAATGCAGATGCATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444123.5 |
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| CDS TCA 72 bp | TGGAGGAGACTGGAGGGGAGGTATCCCGGAGAAGTATaGGCACCACCAGCAGATGGGGTGGTAGCTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: WRRLEGRYPGEV*APPADGVVADA Trigger: GGCATCAGCTACCACCCCATCTGCTGGTGGTGCTCATACTTCTCCGGGATACCTCCCCTCCAGTCTCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 72 bp | CCTGGTGCTCAGGACTGGGATTCGCTCCGCAGGTGCTaGGCAGGCCTGTGTTTAGATTTCCCCTTCCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: PGAQDWDSLRRC*AGLCLDFPFLL Trigger: TAGGAGGAAGGGGAAATCTAAACACAGGCCTGCCCAGCACCTGCGGAGCGAATCCCAGTCCTGAGCACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS GCA 72 bp | ATTCTCTTCTCTTCCTGGAGGGCCCAAGCAGACCTCTaGCAAAGCTCCCCTGGCTTTAGACAGCTCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: ILFSSWRAQADL*QSSPGFRQLPR Trigger: CCGTGGGAGCTGTCTAAAGCCAGGGGAGCTTTGGCAGAGGTCTGCTTGGGCCCTCCAGGAAGAGAAGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669244.1 |
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| CDS CAA 72 bp | ACGGCTTTGCAGCTGAGGCCCAGGATTCAAGACATCTaGACATCGCTGCTCACTGGCTGTGGCCGGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: TALQLRPRIQDI*TSLLTGCGRGN Trigger: GTTACCCCGGCCACAGCCAGTGAGCAGCGATGTCAAGATGTCTTGAATCCTGGGCCTCAGCTGCAAAGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS GCA 72 bp | CTTTCTCTTCTGAAGACACTTCCTTCCTATGCCTGGTaGTCAGGACTGGGATTCGCTCCGCAGGTGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSLLKTLPSYAW*SGLGFAPQVLG Trigger: GCCCAGCACCTGCGGAGCGAATCCCAGTCCTGAGCACCAGGCATAGGAAGGAAGTGTCTTCAGAAGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 72 bp | AGCCTCTTATCCTCCTCTGGGACCACCAGCCTAACCTaGCATGATTCTCTTCTCTTCCTGGAGGGCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLLSSSGTTSLT*HDSLLFLEGPS Trigger: GCTTGGGCCCTCCAGGAAGAGAAGAGAATCATGCCAGGTTAGGCTGGTGGTCCCAGAGGAGGATAAGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669244.1 |
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| CDS TCA 72 bp | CCACCAGCAGATGGGGTGGTAGCTGATGCCTATACTTaGGCATCTGTGGCACCTTTCCTGCGTATGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PPADGVVADAYT*ASVAPFLRMAR Trigger: TCTGGCCATACGCAGGAAAGGTGCCACAGATGCTCAAGTATAGGCATCAGCTACCACCCCATCTGCTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 72 bp | CTCCTTTCTCTTCTGAAGACACTTCCTTCCTATGCCTaGTGCTCAGGACTGGGATTCGCTCCGCAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSLLKTLPSYA*CSGLGFAPQVL Trigger: CAGCACCTGCGGAGCGAATCCCAGTCCTGAGCACCAGGCATAGGAAGGAAGTGTCTTCAGAAGAGAAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS TCA 72 bp | CTTATCCTCCTCTGGGACCACCAGCCTAACCTGGCATaGTTCTCTGCAAGGACCTTTGTAAAGCACTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LILLWDHQPNLA*FSARTFVKHWP Trigger: GGGCCAGTGCTTTACAAAGGTCCTTGCAGAGAATCATGCCAGGTTAGGCTGGTGGTCCCAGAGGAGGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439483.2 |
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| CDS GCA 72 bp | AATCCTCTGAGCTCCAGTATATGCATCTGCATTCAGTaGCTGGCCCTGCATCGGATAGTCACTGAGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: NPLSSSICICIQ*LALHRIVTEGP Trigger: TGGGCCCTCAGTGACTATCCGATGCAGGGCCAGGCACTGAATGCAGATGCATATACTGGAGCTCAGAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000669244.1 |
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| CDS TCA 72 bp | CTGCATTCAGTGCCTGGCCCTGCATCGGATAGTCACTaGGGGCCCATTTTGTCCATGGCATCATGCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LHSVPGPASDSH*GPILSMASCSL Trigger: TAAAGAGCATGATGCCATGGACAAAATGGGCCCTCAGTGACTATCCGATGCAGGGCCAGGCACTGAATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444123.5 ENST00000669244.1 |
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| CDS TCA 72 bp | CATCGCTGCTCACTGGCTGTGGCCGGGGTAACTCACTaGAATCCTCTGAGCTCCAGTATATGCATCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: HRCSLAVAGVTH*NPLSSSICICI Trigger: AATGCAGATGCATATACTGGAGCTCAGAGGATTTCAGTGAGTTACCCCGGCCACAGCCAGTGAGCAGCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS TCA 72 bp | CTGGTTCGTGTGTCTATGTATTGGTTGAGGGTCTGCTaGTCTTGGCTGGGCCTGATTAGGCAACTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVRVSMYWLRVC*SWLGLIRQLCS Trigger: GGAGCAGAGTTGCCTAATCAGGCCCAGCCAAGATCAGCAGACCCTCAACCAATACATAGACACACGAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439483.2 ENST00000669244.1 |
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| CDS TCA 72 bp | AGAAGTATGAGCACCACCAGCAGATGGGGTGGTAGCTaGTGCCTATACTTGAGCATCTGTGGCACCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSMSTTSRWGGS*CLYLSICGTFP Trigger: AGGAAAGGTGCCACAGATGCTCAAGTATAGGCATCAGCTACCACCCCATCTGCTGGTGGTGCTCATACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 72 bp | TCTAGGGATGAACCTGCAAGGACCTTTGTAAAGCACTaGCCCATGGGAACACAGAGGACTGGTTACGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRDEPARTFVKH*PMGTQRTGYGF Trigger: AAAGCCGTAACCAGTCCTCTGTGTTCCCATGGGCCAGTGCTTTACAAAGGTCCTTGCAGGTTCATCCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444123.5 |
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| CDS CCA 72 bp | CTTGTATCTCTGAGCCCGCAAGCCCTGGCACAGGACTaGCAGCTCACAGGTAAATACATGTTGAATATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LVSLSPQALAQD*QLTGKYMLNME Trigger: TTCCATATTCAACATGTATTTACCTGTGAGCTGCCAGTCCTGTGCCAGGGCTTGCGGGCTCAGAGATACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665087.1 ENST00000669244.1 |
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| CDS GCA 72 bp | CTGATGCCTATACTTGAGCATCTGTGGCACCTTTCCTaGGTATGGCCAGAAATACCACAATCTTCTAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LMPILEHLWHLS*VWPEIPQSSRD Trigger: ATCCCTAGAAGATTGTGGTATTTCTGGCCATACGCAGGAAAGGTGCCACAGATGCTCAAGTATAGGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439483.2 ENST00000444123.5 ENST00000665087.1 ENST00000669244.1 |
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| CDS CCA 72 bp | CCTATACTTGAGCATCTGTGGCACCTTTCCTGCGTATaGCCAGAAATACCACAATCTTCTAGGGATGAACCT | + |
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Preference number: 6 (lower is better) Translates to: PILEHLWHLSCV*PEIPQSSRDEP Trigger: AGGTTCATCCCTAGAAGATTGTGGTATTTCTGGCCATACGCAGGAAAGGTGCCACAGATGCTCAAGTATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444123.5 ENST00000665087.1 |
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| CDS CCA 72 bp | CCTATACTTGAGCATCTGTGGCACCTTTCCTGCGTATaGCCAGAAATACCACAATCTTCTAGGGATGAACCA | + |
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Preference number: 6 (lower is better) Translates to: PILEHLWHLSCV*PEIPQSSRDEP Trigger: TGGTTCATCCCTAGAAGATTGTGGTATTTCTGGCCATACGCAGGAAAGGTGCCACAGATGCTCAAGTATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439483.2 ENST00000669244.1 |
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