Pregenerated sensors for LINC02700 (Homo sapiens)
Ensembl gene IDs: ENSG00000255666Ensembl transcript IDs: ENST00000540151.6, ENST00000541293.1, ENST00000542479.1, ENST00000544019.5, ENST00000648581.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGGAGTCAGAGAGCCTTGGGCCAGAGTTCCACGGGCTCTGTGAGTaGCTGCCAGGTGAGTTGAACAGTCCGATTTCCAGTGGGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: KESESLGPEFHGLCE*LPGELNSPISSGVP Trigger: CGGGACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAGGCTCTCTGACTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 90 bp | AAGGAGTCAGAGAGCCTTGGGCCAGAGTTCCACGGGCTCTGTGAGTaGCTGCCAGGTGAGTTGAACAGTCCGATTTCCAGTGGGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: KESESLGPEFHGLCE*LPGELNSPISSGVL Trigger: GAGGACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAGGCTCTCTGACTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540151.6 |
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| CDS CCA 90 bp | GCCTGGCCTGTTCACTCCCATGTCCCCAGGAGCCAGCACCGCATCTaGCACCTAGAAGGTGCTCAGCAAGTCTTTGGAAGAGGAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: AWPVHSHVPRSQHRI*HLEGAQQVFGRGMN Trigger: ATTCATTCCTCTTCCAAAGACTTGCTGAGCACCTTCTAGGTGCCAGATGCGGTGCTGGCTCCTGGGGACATGGGAGTGAACAGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000648581.1 |
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| CDS CCA 90 bp | GCCTGGCCTGTTCACTCCCATGTCCCCAGGAGCCAGCACCGCATCTaGCACCTAGAAGGTGCTCAGCAAGTTAAGCTGTGTAATCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: AWPVHSHVPRSQHRI*HLEGAQQVKLCNLR Trigger: CCTAAGATTACACAGCTTAACTTGCTGAGCACCTTCTAGGTGCCAGATGCGGTGCTGGCTCCTGGGGACATGGGAGTGAACAGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544019.5 |
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| CDS CCA 90 bp | GTTGTTATTTCTGTGGTTGTCTATTTGATGGTTCAGGGCCACGCCTaGCCTGTTCACTCCCATGTCCCCAGGAGCCAGCACCGCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: VVISVVVYLMVQGHA*PVHSHVPRSQHRIW Trigger: CCAGATGCGGTGCTGGCTCCTGGGGACATGGGAGTGAACAGGCCAGGCGTGGCCCTGAACCATCAAATAGACAACCACAGAAATAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CCA 90 bp | GCCTCAAGAAATTTAGCCCAGTTGTTCCTTCCTGCGGGGGTGTCTTaGTCTCAATTAGGATGCGTAGTGGGAACTGTGGCTGGGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASRNLAQLFLPAGVS*SQLGCVVGTVAGPG Trigger: CCCAGGCCCAGCCACAGTTCCCACTACGCATCCTAATTGAGACCAAGACACCCCCGCAGGAAGGAACAACTGGGCTAAATTTCTTGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | TTGGGCCAGAGTTCCACGGGCTCTGTGAGTGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTGGGGTCCCGATTTAAAATTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LGQSSTGSVSGCQVS*TVRFPVGSRFKIGE Trigger: CTCACCAATTTTAAATCGGGACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | GCTCAGCAAGTCTTTGGAAGAGGAATGAATGAGCCAGGACTTGCGTaGGGAAGGACCTGGCTTCCAGCTGTGGTTCTGCCACTTACTAAG | + |
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Preference number: 5 (lower is better) Translates to: AQQVFGRGMNEPGLA*GRTWLPAVVLPLTK Trigger: CTTAGTAAGTGGCAGAACCACAGCTGGAAGCCAGGTCCTTCCTCACGCAAGTCCTGGCTCATTCATTCCTCTTCCAAAGACTTGCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000648581.1 |
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| CDS TCA 90 bp | TGGTCTCAATTAGGATGCGTAGTGGGAACTGTGGCTGGGCCTGGGTaGCTGCCTTTACGGTTTTGGGTGAATAATTCGTCCACTTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: WSQLGCVVGTVAGPG*LPLRFWVNNSSTSR Trigger: CCGAGAAGTGGACGAATTATTCACCCAAAACCGTAAAGGCAGTCACCCAGGCCCAGCCACAGTTCCCACTACGCATCCTAATTGAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | GGCCCGGTTTTGTCTTTGTTGTTGTTATTTCTGTGGTTGTCTATTTaGTGGTTCAGGGCCACGCCTGGCCTGTTCACTCCCATGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: GPVLSLLLLFLWLSI*WFRATPGLFTPMSP Trigger: TGGGGACATGGGAGTGAACAGGCCAGGCGTGGCCCTGAACCATCAAATAGACAACCACAGAAATAACAACAACAAAGACAAAACCGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000541293.1 |
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| CDS TCA 90 bp | GGTCCCGATTTAAAATTGGTGAGATGTTCCTTGGGCTGGTCGGTCTaGGGACCTGAGGTCGTAGGTGGATCTTTCCCATGGAGCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: GPDLKLVRCSLGWSV*GPEVVGGSFPWSKE Trigger: TTCTTTGCTCCATGGGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACCAGCCCAAGGAACATCTCACCAATTTTAAATCGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | TTTAAAATTGGTGAGATGTTCCTTGGGCTGGTCGGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCCCATGGAGCAAAGAACAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FKIGEMFLGLVGLRT*GRRWIFPMEQRTGG Trigger: TCCTCCTGTTCTTTGCTCCATGGGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACCAGCCCAAGGAACATCTCACCAATTTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | CGAGTCACAGCACCAAATTTCATGTGCGTTACATCCTCCGTTTGCTaGGCTCCATGTGTGTGTTGCAGGACTTTCTCCTTAGTTCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: RVTAPNFMCVTSSVC*APCVCCRTFSLVQL Trigger: TAGCTGAACTAAGGAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACGCACATGAAATTTGGTGCTGTGACTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 90 bp | GGTAGAATAGACAGGAAGTTGCCCATAGTGGTCTTGTCTCCAGGCTaGCTCGCCAAAATATATGTTACCAGTAGAAGGTGTTCAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRIDRKLPIVVLSPG*LAKIYVTSRRCSGS Trigger: AGAACCTGAACACCTTCTACTGGTAACATATATTTTGGCGAGCCAGCCTGGAGACAAGACCACTATGGGCAACTTCCTGTCTATTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000540151.6 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CCA 90 bp | TATGTTGAGGCTTGGCTGATCTTCCTTTGTGTTCCAGCTACTGTGTaGAAGGGCCCGGTTTTGTCTTTGTTCATTATCCTTTGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: YVEAWLIFLCVPATV*KGPVLSLFIILCWE Trigger: TTCCCAGCAAAGGATAATGAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAGCCAAGCCTCAACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542479.1 |
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| CDS TCA 90 bp | ATTCGTTCCTTTTCCGAGGAGGTGCAACAGGTTGCTAGAGTGAATTaGACGTCTCTCCATGAGAGATCAAAGGCTAAGGTCAAAGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: IRSFSEEVQQVARVN*TSLHERSKAKVKVW Trigger: CCAAACTTTGACCTTAGCCTTTGATCTCTCATGGAGAGACGTTCAATTCACTCTAGCAACCTGTTGCACCTCCTCGGAAAAGGAACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | CAAAGATTCGTTCCTTTTCCGAGGAGGTGCAACAGGTTGCTAGAGTaGATTGAACGTCTCTCCATGAGAGATCAAAGGCTAAGGTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: QRFVPFPRRCNRLLE*IERLSMRDQRLRSK Trigger: CTTTGACCTTAGCCTTTGATCTCTCATGGAGAGACGTTCAATTCACTCTAGCAACCTGTTGCACCTCCTCGGAAAAGGAACGAATCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS GCA 90 bp | GGATTGGTTTTAAGGAAACGATGTCTTGTGGACCCAGGATACAAATaGAGCCTGACCAACCAGTCCTTCTGCAGTCTTCACATAGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: GLVLRKRCLVDPGYK*SLTNQSFCSLHIVQ Trigger: TTGAACTATGTGAAGACTGCAGAAGGACTGGTTGGTCAGGCTGCATTTGTATCCTGGGTCCACAAGACATCGTTTCCTTAAAACCAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 90 bp | TATGTTGAGGCTTGGCTGATCTTCCTTTGTGTTCCAGCTACTGTGTaGAAGGGCCCGGTTTTGTCTTTGTTGTTGTTATTTCTGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: YVEAWLIFLCVPATV*KGPVLSLLLLFLWL Trigger: CAACCACAGAAATAACAACAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAGCCAAGCCTCAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000541293.1 |
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| CDS CCA 90 bp | TATGTTGAGGCTTGGCTGATCTTCCTTTGTGTTCCAGCTACTGTGTaGAAGGGCCCGGTTTTGTCTTTGTTATTCACCATTATCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: YVEAWLIFLCVPATV*KGPVLSLLFTIILC Trigger: GCAAAGGATAATGGTGAATAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAGCCAAGCCTCAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544019.5 ENST00000648581.1 |
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| CDS TCA 90 bp | ACCCATGTGAACTTTCTTGTTACTCCTACTGTGTCATCCAGTCACTaGGCAAAGTCCTGGGCACACTTCATTAAACACAGTACCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: THVNFLVTPTVSSSH*AKSWAHFIKHSTCF Trigger: AAAGCAGGTACTGTGTTTAATGAAGTGTGCCCAGGACTTTGCTCAGTGACTGGATGACACAGTAGGAGTAACAAGAAAGTTCACATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 90 bp | CCCATGTGTAGCTTTTGGAGCTTACGTCTAATGTCTGGTGTGGATTaGCTAATGAAACGTTGTGCCATTAATAACTTGCCTTCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PMCSFWSLRLMSGVD*LMKRCAINNLPSGE Trigger: CTCTCCTGAAGGCAAGTTATTAATGGCACAACGTTTCATTAGCCAATCCACACCAGACATTAGACGTAAGCTCCAAAAGCTACACATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 90 bp | ATGGGATATTTGAAGAATTTTTATGAGATTATGTTGAGGCTTGGCTaGTCTTCCTTTGTGTTCCAGCTACTGTGTGGAAGGGCCCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: MGYLKNFYEIMLRLG*SSFVFQLLCGRARF Trigger: AAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAGCCAAGCCTCAACATAATCTCATAAAAATTCTTCAAATATCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 72 bp | TCTTTAGCCGCTAAGCCGAGAAGGAGTCAGAGAGCCTaGGGCCAGAGTTCCACGGGCTCTGTGAGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLAAKPRRSQRA*GQSSTGSVSGC Trigger: GCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAGGCTCTCTGACTCCTTCTCGGCTTAGCGGCTAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000648581.1 |
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| CDS CAA 90 bp | CAGTGTCAGTCTTTAGCCGCTAAGCCGAGAAGGAGTCAGAGAGCCTaGGGCCAGAGTTCCACGGGCTCTGTGAGTGGCTGCCAGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: QCQSLAAKPRRSQRA*GQSSTGSVSGCQVS Trigger: ACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAGGCTCTCTGACTCCTTCTCGGCTTAGCGGCTAAAGACTGACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000648581.1 |
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| CDS CAA 90 bp | CTTGGGCCAGAGTTCCACGGGCTCTGTGAGTGGCTGCCAGGTGAGTaGAACAGTCCGATTTCCAGTGGGGTCCTCTTAGGAACAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGPEFHGLCEWLPGE*NSPISSGVLLGTTA Trigger: GGCAGTTGTTCCTAAGAGGACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540151.6 |
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| CDS CCA 72 bp | TCTGTGGTTGTCTATTTGATGGTTCAGGGCCACGCCTaGCCTGTTCACTCCCATGTCCCCAGGAGCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SVVVYLMVQGHA*PVHSHVPRSQH Trigger: GTGCTGGCTCCTGGGGACATGGGAGTGAACAGGCCAGGCGTGGCCCTGAACCATCAAATAGACAACCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CCA 72 bp | GAGAGCCTTGGGCCAGAGTTCCACGGGCTCTGTGAGTaGCTGCCAGGTGAGTTGAACAGTCCGATTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESLGPEFHGLCE*LPGELNSPISS Trigger: ACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTCTGGCCCAAGGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000648581.1 |
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| CDS CCA 72 bp | GTTCACTCCCATGTCCCCAGGAGCCAGCACCGCATCTaGCACCTAGAAGGTGCTCAGCAAGTCTTTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VHSHVPRSQHRI*HLEGAQQVFGR Trigger: TCTTCCAAAGACTTGCTGAGCACCTTCTAGGTGCCAGATGCGGTGCTGGCTCCTGGGGACATGGGAGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000648581.1 |
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| CDS CAA 72 bp | GAGTTCCACGGGCTCTGTGAGTGGCTGCCAGGTGAGTaGAACAGTCCGATTTCCAGTGGGGTCCTCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: EFHGLCEWLPGE*NSPISSGVLLG Trigger: TCCTAAGAGGACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCACAGAGCCCGTGGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540151.6 |
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| CDS TCA 72 bp | GGTGAGATGTTCCTTGGGCTGGTCGGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCCCATGGAGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GEMFLGLVGLRT*GRRWIFPMEQR Trigger: TCTTTGCTCCATGGGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACCAGCCCAAGGAACATCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | TGGCTGGGCCTGGGTGACTGCCTTTACGGTTTTGGGTaGATAATTCGTCCACTTCTCGGAGGGCAGCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: WLGLGDCLYGFG*IIRPLLGGQPQ Trigger: TTGAGGCTGCCCTCCGAGAAGTGGACGAATTATTCACCCAAAACCGTAAAGGCAGTCACCCAGGCCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 90 bp | AGCCTCAAGAAATTTAGCCCAGTTGTTCCTTCCTGCGGGGGTGTCTaGGTCTCAATTAGGATGCGTAGTGGGAACTGTGGCTGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLKKFSPVVPSCGGV*VSIRMRSGNCGWAW Trigger: CCAGGCCCAGCCACAGTTCCCACTACGCATCCTAATTGAGACCAAGACACCCCCGCAGGAAGGAACAACTGGGCTAAATTTCTTGAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | TTAGGATGCGTAGTGGGAACTGTGGCTGGGCCTGGGTaGCTGCCTTTACGGTTTTGGGTGAATAATTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LGCVVGTVAGPG*LPLRFWVNNSS Trigger: GGACGAATTATTCACCCAAAACCGTAAAGGCAGTCACCCAGGCCCAGCCACAGTTCCCACTACGCATCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 90 bp | GGGCCCGGTTTTGTCTTTGTTGTTGTTATTTCTGTGGTTGTCTATTaGATGGTTCAGGGCCACGCCTGGCCTGTTCACTCCCATGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GPGFVFVVVISVVVY*MVQGHAWPVHSHVP Trigger: GGGGACATGGGAGTGAACAGGCCAGGCGTGGCCCTGAACCATCAAATAGACAACCACAGAAATAACAACAACAAAGACAAAACCGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540151.6 ENST00000541293.1 |
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| CDS CCA 72 bp | CAGGACTTGCGTGAGGAAGGACCTGGCTTCCAGCTGTaGTTCTGCCACTTACTAAGCTGTGTAATCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: QDLREEGPGFQL*FCHLLSCVILG Trigger: TCCTAAGATTACACAGCTTAGTAAGTGGCAGAACCACAGCTGGAAGCCAGGTCCTTCCTCACGCAAGTCCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000648581.1 |
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| CDS CCA 72 bp | TTTAAAGGCTTCCCGCAGCCTGCCGTAAAACACAGCTaGGTTTTCCTCCCTGCCTTGTGTAATCTGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: FKGFPQPAVKHS*VFLPALCNLPY Trigger: GTAAGGCAGATTACACAAGGCAGGGAGGAAAACCCAGCTGTGTTTTACGGCAGGCTGCGGGAAGCCTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | GCTATTTCTCTGAGAGTAGCAGGGCTGGATAGAGAGTaGAATACAGTGTTCCCCTCCAAGTGTGAGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AISLRVAGLDRE*NTVFPSKCEGD Trigger: GTCCCCCTCACACTTGGAGGGGAACACTGTATTCAACTCTCTATCCAGCCCTGCTACTCTCAGAGAAATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | CGTTACATCCTCCGTTTGCTGAGCTCCATGTGTGTGTaGCAGGACTTTCTCCTTAGTTCAGCTAAAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: RYILRLLSSMCV*QDFLLSSAKDG Trigger: CCCGTCTTTAGCTGAACTAAGGAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 90 bp | TTTCATGTGCGTTACATCCTCCGTTTGCTGAGCTCCATGTGTGTGTaGCAGGACTTTCTCCTTAGTTCAGCTAAAGACGGGGTCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FHVRYILRLLSSMCV*QDFLLSSAKDGVLV Trigger: GACAAGGACCCCGTCTTTAGCTGAACTAAGGAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACGCACATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS GCA 72 bp | TTAAGGAAACGATGTCTTGTGGACCCAGGATACAAATaGAGCCTGACCAACCAGTCCTTCTGCAGTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LRKRCLVDPGYK*SLTNQSFCSLH Trigger: GTGAAGACTGCAGAAGGACTGGTTGGTCAGGCTGCATTTGTATCCTGGGTCCACAAGACATCGTTTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 72 bp | GACAGGAAGTTGCCCATAGTGGTCTTGTCTCCAGGCTaGCTCGCCAAAATATATGTTACCAGTAGAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: DRKLPIVVLSPG*LAKIYVTSRRC Trigger: ACACCTTCTACTGGTAACATATATTTTGGCGAGCCAGCCTGGAGACAAGACCACTATGGGCAACTTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000540151.6 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 72 bp | CCAGGTAGAATAGACAGGAAGTTGCCCATAGTGGTCTaGTCTCCAGGCTGGCTCGCCAAAATATATGTTACC | + |
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Preference number: 6 (lower is better) Translates to: PGRIDRKLPIVV*SPGWLAKIYVT Trigger: GGTAACATATATTTTGGCGAGCCAGCCTGGAGACAAGACCACTATGGGCAACTTCCTGTCTATTCTACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000540151.6 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 72 bp | GTTCCAGCTACTGTGTGGAAGGGCCCGGTTTTGTCTTaGTTCATTATCCTTTGCTGGGAATGTTGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: VPATVWKGPVLS*FIILCWECCNS Trigger: GCTGTTGCAACATTCCCAGCAAAGGATAATGAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542479.1 |
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| CDS CAA 72 bp | CACAGCACCAAATTTCATGTGCGTTACATCCTCCGTTaGCTGAGCTCCATGTGTGTGTTGCAGGACTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HSTKFHVRYILR*LSSMCVLQDFL Trigger: GAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACGCACATGAAATTTGGTGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | CTCATTCCTCCAAGAGCCTCAAGAAATTTAGCCCAGTaGTTCCTTCCTGCGGGGGTGTCTTGGTCTCAATTA | + |
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Preference number: 6 (lower is better) Translates to: LIPPRASRNLAQ*FLPAGVSWSQL Trigger: TAATTGAGACCAAGACACCCCCGCAGGAAGGAACAACTGGGCTAAATTTCTTGAGGCTCTTGGAGGAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 90 bp | ACAGTGACACCAGGTAGAATAGACAGGAAGTTGCCCATAGTGGTCTaGTCTCCAGGCTGGCTCGCCAAAATATATGTTACCAGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TVTPGRIDRKLPIVV*SPGWLAKIYVTSRR Trigger: CCTTCTACTGGTAACATATATTTTGGCGAGCCAGCCTGGAGACAAGACCACTATGGGCAACTTCCTGTCTATTCTACCTGGTGTCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000540151.6 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 90 bp | CTGATCTTCCTTTGTGTTCCAGCTACTGTGTGGAAGGGCCCGGTTTaGTCTTTGTTCATTATCCTTTGCTGGGAATGTTGCAACAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LIFLCVPATVWKGPV*SLFIILCWECCNSS Trigger: GGAGCTGTTGCAACATTCCCAGCAAAGGATAATGAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542479.1 |
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| CDS CAA 90 bp | AATCCGAGTCACAGCACCAAATTTCATGTGCGTTACATCCTCCGTTaGCTGAGCTCCATGTGTGTGTTGCAGGACTTTCTCCTTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: NPSHSTKFHVRYILR*LSSMCVLQDFLLSS Trigger: TGAACTAAGGAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACGCACATGAAATTTGGTGCTGTGACTCGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | GCACCAAATTTCATGTGCGTTACATCCTCCGTTTGCTaGGCTCCATGTGTGTGTTGCAGGACTTTCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: APNFMCVTSSVC*APCVCCRTFSL Trigger: TAAGGAGAAAGTCCTGCAACACACACATGGAGCTCAGCAAACGGAGGATGTAACGCACATGAAATTTGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | TTTTCCGAGGAGGTGCAACAGGTTGCTAGAGTGAATTaGACGTCTCTCCATGAGAGATCAAAGGCTAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: FSEEVQQVARVN*TSLHERSKAKV Trigger: GACCTTAGCCTTTGATCTCTCATGGAGAGACGTTCAATTCACTCTAGCAACCTGTTGCACCTCCTCGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | GTTCCTTTTCCGAGGAGGTGCAACAGGTTGCTAGAGTaGATTGAACGTCTCTCCATGAGAGATCAAAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: VPFPRRCNRLLE*IERLSMRDQRL Trigger: TAGCCTTTGATCTCTCATGGAGAGACGTTCAATTCACTCTAGCAACCTGTTGCACCTCCTCGGAAAAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | GTTCCAGCTACTGTGTGGAAGGGCCCGGTTTTGTCTTaGTTATTCACCATTATCCTTTGCTGGGAATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VPATVWKGPVLS*LFTIILCWECC Trigger: GCAACATTCCCAGCAAAGGATAATGGTGAATAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 90 bp | CTGATCTTCCTTTGTGTTCCAGCTACTGTGTGGAAGGGCCCGGTTTaGTCTTTGTTATTCACCATTATCCTTTGCTGGGAATGTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LIFLCVPATVWKGPV*SLLFTIILCWECCN Trigger: GTTGCAACATTCCCAGCAAAGGATAATGGTGAATAACAAAGACAAAACCGGGCCCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000544019.5 ENST00000648581.1 |
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| CDS CCA 72 bp | TCTCTCCATGAGAGATCAAAGGCTAAGGTCAAAGTTTaGAACCCATCTGCAAACTTCCCGGAATCCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLHERSKAKVKV*NPSANFPESSE Trigger: TTCTGAGGATTCCGGGAAGTTTGCAGATGGGTTCCAAACTTTGACCTTAGCCTTTGATCTCTCATGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | AGCAAGAGCCTTTGCTGGCATTATCCTTATGGCCCTTaGAGTTTCCCTTGGACAATCTTTGTGCATTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SKSLCWHYPYGP*SFPWTIFVHLG Trigger: CCCTAAATGCACAAAGATTGTCCAAGGGAAACTCAAAGGGCCATAAGGATAATGCCAGCAAAGGCTCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 72 bp | CATTTGAAGCAAGAGCCTTTGCTGGCATTATCCTTATaGCCCTTTGAGTTTCCCTTGGACAATCTTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HLKQEPLLALSL*PFEFPLDNLCA Trigger: TGCACAAAGATTGTCCAAGGGAAACTCAAAGGGCCATAAGGATAATGCCAGCAAAGGCTCTTGCTTCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | CCAATCGCACTTTTATTGCATTTGAAGCAAGAGCCTTaGCTGGCATTATCCTTATGGCCCTTTGAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PIALLLHLKQEP*LALSLWPFEFP Trigger: GGGAAACTCAAAGGGCCATAAGGATAATGCCAGCAAAGGCTCTTGCTTCAAATGCAATAAAAGTGCGATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | CGATTGTTATACACCATGAAGGCAGTACCAAGAAGCTaGTTTTGGTTAGTTTGTGGCCCCATGTGTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: RLLYTMKAVPRS*FWLVCGPMCSF Trigger: AAAGCTACACATGGGGCCACAAACTAACCAAAATCAGCTTCTTGGTACTGCCTTCATGGTGTATAACAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CCA 72 bp | AGCTTTTGGAGCTTACGTCTAATGTCTGGTGTGGATTaGCTAATGAAACGTTGTGCCATTAATAACTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SFWSLRLMSGVD*LMKRCAINNLP Trigger: AGGCAAGTTATTAATGGCACAACGTTTCATTAGCCAATCCACACCAGACATTAGACGTAAGCTCCAAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS CAA 72 bp | GCATTTAGGGCATCACCAGTGATGGCTAACATAATTTaGGCTTGCCGTTTTTCTTTACTCTGTTTCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AFRASPVMANII*ACRFSLLCFPS Trigger: AGAAGGGAAACAGAGTAAAGAAAAACGGCAAGCCAAAATTATGTTAGCCATCACTGGTGATGCCCTAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS TCA 72 bp | TTGAAGAATTTTTATGAGATTATGTTGAGGCTTGGCTaGTCTTCCTTTGTGTTCCAGCTACTGTGTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LKNFYEIMLRLG*SSFVFQLLCGR Trigger: CCTTCCACACAGTAGCTGGAACACAAAGGAAGATCAGCCAAGCCTCAACATAATCTCATAAAAATTCTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000540151.6 ENST00000541293.1 ENST00000542479.1 ENST00000544019.5 ENST00000648581.1 |
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| CDS CAA 72 bp | GTGGATTGGCTAATGAAACGTTGTGCCATTAATAACTaGCCTTCAGGAGAGGAAGGGACCAAATTAGTATAT | + |
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Preference number: 6 (lower is better) Translates to: VDWLMKRCAINN*PSGEEGTKLVY Trigger: ATATACTAATTTGGTCCCTTCCTCTCCTGAAGGCAAGTTATTAATGGCACAACGTTTCATTAGCCAATCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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| CDS GCA 72 bp | GCCTTGTGTAATCTGCCTTACTTTATCATAATTTACTaGCTTAGTTATTCCCTTTCTCATTCCTCCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ALCNLPYFIIIY*LSYSLSHSSKS Trigger: GCTCTTGGAGGAATGAGAAAGGGAATAACTAAGGCAGTAAATTATGATAAAGTAAGGCAGATTACACAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648581.1 |
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