Pregenerated sensors for LINC02699 (Homo sapiens)
Ensembl gene IDs: ENSG00000254456Ensembl transcript IDs: ENST00000526327.6, ENST00000533049.5, ENST00000533942.2, ENST00000654912.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTAACAACTTTGAGGGCTGTGGGGCAGCAGAAATGGTGTTCTGCCTaGTCTGTCTGGGAGATCCAGTTGGGTCTTGTGAGGTCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTTLRAVGQQKWCSA*SVWEIQLGLVRSQA Trigger: GGCCTGAGACCTCACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAAAGTTGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CCA 90 bp | CAGAGTCGGGGAGTAACAACTTTGAGGGCTGTGGGGCAGCAGAAATaGTGTTCTGCCTGCTCTGTCTGGGAGATCCAGTTGGGTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSRGVTTLRAVGQQK*CSACSVWEIQLGLV Trigger: CACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAAAGTTGTTACTCCCCGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS TCA 90 bp | GTTGCAGATCTCACCTTGGCTGTCCTGAGCTGTATACCACTGGTCTaGGGCGAGCTCAAGCTTTATGTTCTCTCCCCAGCTTGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VADLTLAVLSCIPLV*GELKLYVLSPAWRQ Trigger: CTGCCTCCAAGCTGGGGAGAGAACATAAAGCTTGAGCTCGCCTCAGACCAGTGGTATACAGCTCAGGACAGCCAAGGTGAGATCTGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS GCA 90 bp | GGGAGTAACAACTTTGAGGGCTGTGGGGCAGCAGAAATGGTGTTCTaGCTGCTCTGTCTGGGAGATCCAGTTGGGTCTTGTGAGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSNNFEGCGAAEMVF*LLCLGDPVGSCEVS Trigger: TGAGACCTCACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAAAGTTGTTACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS TCA 90 bp | CCTCTTCCACTTGAGTGTTGGTTGCAGATCTCACCTTGGCTGTCCTaGGCTGTATACCACTGGTCTGAGGCGAGCTCAAGCTTTATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPLECWLQISPWLS*AVYHWSEASSSFMF Trigger: GAACATAAAGCTTGAGCTCGCCTCAGACCAGTGGTATACAGCTCAGGACAGCCAAGGTGAGATCTGCAACCAACACTCAAGTGGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS CCA 90 bp | ATAGCAGTTTATTCACAGTGGAAGCCAGTGACATATACAGTCAGCTaGCCTTTGACAATGGCGCCAAGAATCACCATGGAGGTAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: IAVYSQWKPVTYTVS*PLTMAPRITMEVRI Trigger: TATTCTTACCTCCATGGTGATTCTTGGCGCCATTGTCAAAGGCCAGCTGACTGTATATGTCACTGGCTTCCACTGTGAATAAACTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654912.1 |
||
| CDS GCA 72 bp | TTGAGGGCTGTGGGGCAGCAGAAATGGTGTTCTGCCTaGTCTGTCTGGGAGATCCAGTTGGGTCTTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRAVGQQKWCSA*SVWEIQLGLVR Trigger: CCTCACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS TCA 72 bp | CTGCCTGCTCTGTCTGGGAGATCCAGTTGGGTCTTGTaGGGTCTCAGGCCTGGTTGTTGGAAGGACACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPALSGRSSWVL*GLRPGCWKDTS Trigger: TGATGTGTCCTTCCAACAACCAGGCCTGAGACCTCACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS TCA 72 bp | CTCACCTTGGCTGTCCTGAGCTGTATACCACTGGTCTaGGGCGAGCTCAAGCTTTATGTTCTCTCCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTLAVLSCIPLV*GELKLYVLSPA Trigger: AGCTGGGGAGAGAACATAAAGCTTGAGCTCGCCTCAGACCAGTGGTATACAGCTCAGGACAGCCAAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS TCA 72 bp | CTTGAGTGTTGGTTGCAGATCTCACCTTGGCTGTCCTaGGCTGTATACCACTGGTCTGAGGCGAGCTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LECWLQISPWLS*AVYHWSEASSS Trigger: GCTTGAGCTCGCCTCAGACCAGTGGTATACAGCTCAGGACAGCCAAGGTGAGATCTGCAACCAACACTCAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS GCA 72 bp | CTCAGGCCTGGTTGTTGGAAGGACACATCAGTTTGTTaGCACATGGGCCTCTGCATAGGGAATCTCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRPGCWKDTSVC*HMGLCIGNLTV Trigger: CACCGTGAGATTCCCTATGCAGAGGCCCATGTGGCAACAAACTGATGTGTCCTTCCAACAACCAGGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS GCA 72 bp | AACTTTGAGGGCTGTGGGGCAGCAGAAATGGTGTTCTaGCTGCTCTGTCTGGGAGATCCAGTTGGGTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NFEGCGAAEMVF*LLCLGDPVGSC Trigger: ACAAGACCCAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CCA 72 bp | GGAGTAACAACTTTGAGGGCTGTGGGGCAGCAGAAATaGTGTTCTGCCTGCTCTGTCTGGGAGATCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVTTLRAVGQQK*CSACSVWEIQL Trigger: CAACTGGATCTCCCAGACAGAGCAGGCAGAACACCATTTCTGCTGCCCCACAGCCCTCAAAGTTGTTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CAA 90 bp | ACCACTGGTCTGAGGCGAGCTCAAGCTTTATGTTCTCTCCCCAGCTaGGAGGCAGCAGGGAATGGGATCTTGATGATGGTTGTGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTGLRRAQALCSLPS*EAAGNGILMMVVRE Trigger: CTCTCTCACAACCATCATCAAGATCCCATTCCCTGCTGCCTCCAAGCTGGGGAGAGAACATAAAGCTTGAGCTCGCCTCAGACCAGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CAA 72 bp | TCTCAGGCCTGGTTGTTGGAAGGACACATCAGTTTGTaGCCACATGGGCCTCTGCATAGGGAATCTCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQAWLLEGHISL*PHGPLHRESHG Trigger: ACCGTGAGATTCCCTATGCAGAGGCCCATGTGGCAACAAACTGATGTGTCCTTCCAACAACCAGGCCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CAA 72 bp | AGGTCTCAGGCCTGGTTGTTGGAAGGACACATCAGTTaGTTGCCACATGGGCCTCTGCATAGGGAATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSQAWLLEGHIS*LPHGPLHRESH Trigger: GTGAGATTCCCTATGCAGAGGCCCATGTGGCAACAAACTGATGTGTCCTTCCAACAACCAGGCCTGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CAA 72 bp | GAGATCCAGTTGGGTCTTGTGAGGTCTCAGGCCTGGTaGTTGGAAGGACACATCAGTTTGTTGCCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: EIQLGLVRSQAW*LEGHISLLPHG Trigger: CCCATGTGGCAACAAACTGATGTGTCCTTCCAACAACCAGGCCTGAGACCTCACAAGACCCAACTGGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS CAA 72 bp | CTGAGGCGAGCTCAAGCTTTATGTTCTCTCCCCAGCTaGGAGGCAGCAGGGAATGGGATCTTGATGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRAQALCSLPS*EAAGNGILMMV Trigger: AACCATCATCAAGATCCCATTCCCTGCTGCCTCCAAGCTGGGGAGAGAACATAAAGCTTGAGCTCGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526327.6 ENST00000533049.5 |
||
| CDS GCA 72 bp | CTTCAGCCACATGCTCATCTGTATTTTGCTCATGATTaGAGTCATGCACCCCCTCAGTGGTCTGAAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPHAHLYFAHD*SHAPPQWSESV Trigger: CACACTTTCAGACCACTGAGGGGGTGCATGACTGCAATCATGAGCAAAATACAGATGAGCATGTGGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS CCA 72 bp | TATTCACAGTGGAAGCCAGTGACATATACAGTCAGCTaGCCTTTGACAATGGCGCCAAGAATCACCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YSQWKPVTYTVS*PLTMAPRITME Trigger: CTCCATGGTGATTCTTGGCGCCATTGTCAAAGGCCAGCTGACTGTATATGTCACTGGCTTCCACTGTGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654912.1 |
||
| CDS CAA 72 bp | GGTAGACTCTTCTTCAGCCACATGCTCATCTGTATTTaGCTCATGATTGCAGTCATGCACCCCCTCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRLFFSHMLICI*LMIAVMHPLSG Trigger: ACCACTGAGGGGGTGCATGACTGCAATCATGAGCAAAATACAGATGAGCATGTGGCTGAAGAAGAGTCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||
| CDS CCA 72 bp | ATTACAGAAGTCCCAGGGTTAACATATACAGTCAGCTaGCCTTTGACAATGGCGCCAAGAATCACCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ITEVPGLTYTVS*PLTMAPRITME Trigger: CTCCATGGTGATTCTTGGCGCCATTGTCAAAGGCCAGCTGACTGTATATGTTAACCCTGGGACTTCTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533942.2 |
||
| CDS GCA 72 bp | TGGAAGGACACATCAGTTTGTTGCCACATGGGCCTCTaGATAGGGAATCTCACGGTGACATATACATATACA | + |
|
Preference number: 6 (lower is better) Translates to: WKDTSVCCHMGL*IGNLTVTYTYT Trigger: TGTATATGTATATGTCACCGTGAGATTCCCTATGCAGAGGCCCATGTGGCAACAAACTGATGTGTCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526327.6 |
||