Pregenerated sensors for LINC02697 (Homo sapiens)
Ensembl gene IDs: ENSG00000255327Ensembl transcript IDs: ENST00000528497.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGAAGCGATGTGCAGACTCCGATTCAATATCTTCAATGTAGGCTCTaGGGTTCTACATTTCTAACAGCTCCTGGAAGGGCCAGTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RSDVQTPIQYLQCRL*GSTFLTAPGRASAA Trigger: AGCAGCACTGGCCCTTCCAGGAGCTGTTAGAAATGTAGAACCTCAGAGCCTACATTGAAGATATTGAATCGGAGTCTGCACATCGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS CAA 72 bp | ATGAAGTCCCAGGGCCCTGGCCCCACTACAAGGAGCTaGAATTTAGCAGGTCTGCAGTGGGCCTGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: MKSQGPGPTTRS*NLAGLQWAWAA Trigger: AGCTGCCCAGGCCCACTGCAGACCTGCTAAATTCAAGCTCCTTGTAGTGGGGCCAGGGCCCTGGGACTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS TCA 72 bp | GGAAGGGCCAGTGCTGCTGGCATGTGGACAACTCTTTaGGTACACAGGTTCCAGGTCTGTGGCTCCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GRASAAGMWTTL*VHRFQVCGSRS Trigger: AGACCGGGAGCCACAGACCTGGAACCTGTGTACTCAAAGAGTTGTCCACATGCCAGCAGCACTGGCCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS CAA 72 bp | TGGAAGGGCCAGTGCTGCTGGCATGTGGACAACTCTTaGAGTACACAGGTTCCAGGTCTGTGGCTCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: WKGQCCWHVDNS*STQVPGLWLPV Trigger: GACCGGGAGCCACAGACCTGGAACCTGTGTACTCAAAGAGTTGTCCACATGCCAGCAGCACTGGCCCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS CAA 90 bp | GAGTTTTGTATGAAGTCCCAGGGCCCTGGCCCCACTACAAGGAGCTaGAATTTAGCAGGTCTGCAGTGGGCCTGGGCAGCTGTATGTTTA | + |
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Preference number: 6 (lower is better) Translates to: EFCMKSQGPGPTTRS*NLAGLQWAWAAVCL Trigger: TAAACATACAGCTGCCCAGGCCCACTGCAGACCTGCTAAATTCAAGCTCCTTGTAGTGGGGCCAGGGCCCTGGGACTTCATACAAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS GCA 72 bp | AGGTTCTACATTTCTAACAGCTCCTGGAAGGGCCAGTaGTGCTGGCATGTGGACAACTCTTTGAGTACACAG | + |
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Preference number: 6 (lower is better) Translates to: RFYISNSSWKGQ*CWHVDNSLSTQ Trigger: CTGTGTACTCAAAGAGTTGTCCACATGCCAGCAGCACTGGCCCTTCCAGGAGCTGTTAGAAATGTAGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS CCA 72 bp | TACATTTCTAACAGCTCCTGGAAGGGCCAGTGCTGCTaGCATGTGGACAACTCTTTGAGTACACAGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: YISNSSWKGQCC*HVDNSLSTQVP Trigger: TGGAACCTGTGTACTCAAAGAGTTGTCCACATGCCAGCAGCACTGGCCCTTCCAGGAGCTGTTAGAAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS CAA 72 bp | GTCTTGGTTTTCTCATCAGTGATGACTTGCAGAGTTTaGTATGAAGTCCCAGGGCCCTGGCCCCACTACAAG | + |
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Preference number: 6 (lower is better) Translates to: VLVFSSVMTCRV*YEVPGPWPHYK Trigger: CTTGTAGTGGGGCCAGGGCCCTGGGACTTCATACAAAACTCTGCAAGTCATCACTGATGAGAAAACCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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| CDS GCA 72 bp | TTCTACATTTCTAACAGCTCCTGGAAGGGCCAGTGCTaGTGGCATGTGGACAACTCTTTGAGTACACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: FYISNSSWKGQC*WHVDNSLSTQV Trigger: AACCTGTGTACTCAAAGAGTTGTCCACATGCCAGCAGCACTGGCCCTTCCAGGAGCTGTTAGAAATGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528497.1 |
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