Pregenerated sensors for LINC02691 (Homo sapiens)
Ensembl gene IDs: ENSG00000258913Ensembl transcript IDs: ENST00000553757.1, ENST00000555282.1, ENST00000556528.1, ENST00000662137.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACGCGGGCCCACGGGTCCGGGAACACTCAGCGAGGGCCGGGACAGTaGCAGTGGGTGCCTTCATCAGAGCAGAAGCAGCCCCAGGACGCC | + |
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Preference number: 5 (lower is better) Translates to: TRAHGSGNTQRGPGQ*QWVPSSEQKQPQDA Trigger: GGCGTCCTGGGGCTGCTTCTGCTCTGATGAAGGCACCCACTGTCACTGTCCCGGCCCTCGCTGAGTGTTCCCGGACCCGTGGGCCCGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553757.1 ENST00000555282.1 ENST00000556528.1 |
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| CDS CCA 90 bp | TTCCTCCTCGCACTGAGGTCTGAGAACGGGAAGAGGCTCCGAGGCTaGAGCTCCCCAAGGCCTGGCACAGACGCGGGCCCACGGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: FLLALRSENGKRLRG*SSPRPGTDAGPRVR Trigger: CCGGACCCGTGGGCCCGCGTCTGTGCCAGGCCTTGGGGAGCTCCAGCCTCGGAGCCTCTTCCCGTTCTCAGACCTCAGTGCGAGGAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000553757.1 ENST00000555282.1 ENST00000556528.1 ENST00000662137.1 |
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| CDS TCA 90 bp | CGGGTCCCCCATAAACCCAGATTCCAAAGCGGCGGACAGCTGGTCTaGTCCTGGGCATCCAAGGTTGCAGAGCCCTGGGCCCCACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RVPHKPRFQSGGQLV*SWASKVAEPWAPRP Trigger: TGGCCGTGGGGCCCAGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCGCTTTGGAATCTGGGTTTATGGGGGACCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CCA 90 bp | AGGCCCGGGTCCCCCATAAACCCAGATTCCAAAGCGGCGGACAGCTaGTCTGATCCTGGGCATCCAAGGTTGCAGAGCCCTGGGCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RPGSPINPDSKAADS*SDPGHPRLQSPGPH Trigger: GTGGGGCCCAGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCGCTTTGGAATCTGGGTTTATGGGGGACCCGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 90 bp | GCGTGTGGGGCTGGCGAGCCGGGGAGAAGAGGCTCCTCCAACGGCTaGTCACATGTAGCTCGCCGTTCTGCGGTCTCGCAAACAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: ACGAGEPGRRGSSNG*SHVARRSAVSQTVT Trigger: AGTGACTGTTTGCGAGACCGCAGAACGGCGAGCTACATGTGATCAGCCGTTGGAGGAGCCTCTTCTCCCCGGCTCGCCAGCCCCACACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS GCA 90 bp | TGCGGTCTCGCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACTTaGTGGCAACCGAGAGGCCACAGGAGCTTAGGACTGCACGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: CGLANSHWPTAKERT*WQPRGHRSLGLHAA Trigger: GGCCGCGTGCAGTCCTAAGCTCCTGTGGCCTCTCGGTTGCCAGCAAGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGCGAGACCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS CCA 90 bp | GGTCTCGCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACTTGCTaGCAACCGAGAGGCCACAGGAGCTTAGGACTGCACGCGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: GLANSHWPTAKERTC*QPRGHRSLGLHAAT Trigger: AGTGGCCGCGTGCAGTCCTAAGCTCCTGTGGCCTCTCGGTTGCCAGCAAGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGCGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS CCA 90 bp | CCTCTTCTTCTGGCTCTGGAAGCTGCCATGGGCTGTGGGCTGTCTTaGTCCACAAGGCAACAACTCTGGACGCCCCATGCTGGGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: PLLLALEAAMGCGLS*STRQQLWTPHAGPR Trigger: CCTAGGCCCAGCATGGGGCGTCCAGAGTTGTTGCCTTGTGGACCAAGACAGCCCACAGCCCATGGCAGCTTCCAGAGCCAGAAGAAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553757.1 |
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| CDS GCA 90 bp | ATTCCAAAGCGGCGGACAGCTGGTCTGATCCTGGGCATCCAAGGTTaGAGAGCCCTGGGCCCCACGGCCATTTACAATGGGGACATTTGC | + |
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Preference number: 5 (lower is better) Translates to: IPKRRTAGLILGIQG*RALGPTAIYNGDIC Trigger: GCAAATGTCCCCATTGTAAATGGCCGTGGGGCCCAGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCGCTTTGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 90 bp | GCCTCAGGAATGACTGTTGCACCCATCAGCCCCCTCAATGGCAGGTaGGGGAGAACCAGCAAGGCTCAGAGGACTCTTAAGAGCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ASGMTVAPISPLNGR*GRTSKAQRTLKSQP Trigger: TGGCTGGCTCTTAAGAGTCCTCTGAGCCTTGCTGGTTCTCCCTCACCTGCCATTGAGGGGGCTGATGGGTGCAACAGTCATTCCTGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS GCA 90 bp | GAGAAGAGGCTCCTCCAACGGCTGATCACATGTAGCTCGCCGTTCTaGGGTCTCGCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: EKRLLQRLITCSSPF*GLANSHWPTAKERT Trigger: AGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGCGAGACCGCAGAACGGCGAGCTACATGTGATCAGCCGTTGGAGGAGCCTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS CCA 90 bp | AGAGATGACTCCTCTTCTTCTGGCTCTGGAAGCTGCCATGGGCTGTaGGCTGTCTTGGTCCACAAGGCAACAACTCTGGACGCCCCATGC | + |
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Preference number: 5 (lower is better) Translates to: RDDSSSSGSGSCHGL*AVLVHKATTLDAPC Trigger: GCATGGGGCGTCCAGAGTTGTTGCCTTGTGGACCAAGACAGCCCACAGCCCATGGCAGCTTCCAGAGCCAGAAGAAGAGGAGTCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553757.1 |
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| CDS GCA 90 bp | CCAGGGCTCTTCAGAGATGACTCCTCTTCTTCTGGCTCTGGAAGCTaGCATGGGCTGTGGGCTGTCTTGGTCCACAAGGCAACAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: PGLFRDDSSSSGSGS*HGLWAVLVHKATTL Trigger: CAGAGTTGTTGCCTTGTGGACCAAGACAGCCCACAGCCCATGGCAGCTTCCAGAGCCAGAAGAAGAGGAGTCATCTCTGAAGAGCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553757.1 |
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| CDS GCA 90 bp | CTGCAGAATCTGGAGTCACCTTCGCACCGGCAGCAACTTGAGAAGTaGAGGAGATGTGTTCCTTCAGCAGCTGAGGGGACAGAGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LQNLESPSHRQQLEK*RRCVPSAAEGTEAP Trigger: TGGAGCCTCTGTCCCCTCAGCTGCTGAAGGAACACATCTCCTGCACTTCTCAAGTTGCTGCCGGTGCGAAGGTGACTCCAGATTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 90 bp | ACTCTGCAGCTGAGGAGCCTTGCTTCTGGACCTGCTGACATTTGCTaGGCAGCTACGGAGCCCAAACTGCAGAATCTGGAGTCACCTTCG | + |
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Preference number: 5 (lower is better) Translates to: TLQLRSLASGPADIC*AATEPKLQNLESPS Trigger: CGAAGGTGACTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAATGTCAGCAGGTCCAGAAGCAAGGCTCCTCAGCTGCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS GCA 90 bp | CTTCTGGACCTGCTGACATTTGCTGAGCAGCTACGGAGCCCAAACTaGAGAATCTGGAGTCACCTTCGCACCGGCAGCAACTTGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LLDLLTFAEQLRSPN*RIWSHLRTGSNLRS Trigger: ACTTCTCAAGTTGCTGCCGGTGCGAAGGTGACTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAATGTCAGCAGGTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CCA 90 bp | CTGCTGACATTTGCTGAGCAGCTACGGAGCCCAAACTGCAGAATCTaGAGTCACCTTCGCACCGGCAGCAACTTGAGAAGTGCAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LLTFAEQLRSPNCRI*SHLRTGSNLRSAGD Trigger: ATCTCCTGCACTTCTCAAGTTGCTGCCGGTGCGAAGGTGACTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAATGTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 90 bp | CCCCACGGCCATTTACAATGGGGACATTTGCATTCACTCTGCAGCTaGGGAGCCTTGCTTCTGGACCTGCTGACATTTGCTGAGCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: PHGHLQWGHLHSLCS*GALLLDLLTFAEQL Trigger: TAGCTGCTCAGCAAATGTCAGCAGGTCCAGAAGCAAGGCTCCTCAGCTGCAGAGTGAATGCAAATGTCCCCATTGTAAATGGCCGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 90 bp | GCATCTTTTTCCAATCCCACACTCAGTGATGTTGTGTTGGTAACTTaGAGTCAGCCATGGCAGGAGTGTTTACACCATGGGAATTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASFSNPTLSDVVLVT*SQPWQECLHHGNWQ Trigger: CTGCCAATTCCCATGGTGTAAACACTCCTGCCATGGCTGACTTCAAGTTACCAACACAACATCACTGAGTGTGGGATTGGAAAAAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS CCA 72 bp | GGCTGTGGGCTGTCTTGGTCCACAAGGCAACAACTCTaGACGCCCCATGCTGGGCCTAGGGGCCTCCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GCGLSWSTRQQL*TPHAGPRGLRS Trigger: ACTGCGGAGGCCCCTAGGCCCAGCATGGGGCGTCCAGAGTTGTTGCCTTGTGGACCAAGACAGCCCACAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553757.1 |
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| CDS TCA 72 bp | GCTGGCGAGCCGGGGAGAAGAGGCTCCTCCAACGGCTaGTCACATGTAGCTCGCCGTTCTGCGGTCTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: AGEPGRRGSSNG*SHVARRSAVSQ Trigger: TTGCGAGACCGCAGAACGGCGAGCTACATGTGATCAGCCGTTGGAGGAGCCTCTTCTCCCCGGCTCGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS GCA 72 bp | CGGCGGACAGCTGGTCTGATCCTGGGCATCCAAGGTTaGAGAGCCCTGGGCCCCACGGCCATTTACAATGGG | + |
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Preference number: 6 (lower is better) Translates to: RRTAGLILGIQG*RALGPTAIYNG Trigger: CCCATTGTAAATGGCCGTGGGGCCCAGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CAA 90 bp | CTGCGGTCTCGCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACTaGCTGGCAACCGAGAGGCCACAGGAGCTTAGGACTGCACGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSRKQSLAHSQGKD*LATERPQELRTARG Trigger: GCCGCGTGCAGTCCTAAGCTCCTGTGGCCTCTCGGTTGCCAGCAAGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGCGAGACCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS CCA 72 bp | CTGGCTCTGGAAGCTGCCATGGGCTGTGGGCTGTCTTaGTCCACAAGGCAACAACTCTGGACGCCCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: LALEAAMGCGLS*STRQQLWTPHA Trigger: AGCATGGGGCGTCCAGAGTTGTTGCCTTGTGGACCAAGACAGCCCACAGCCCATGGCAGCTTCCAGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553757.1 |
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| CDS TCA 72 bp | CATAAACCCAGATTCCAAAGCGGCGGACAGCTGGTCTaGTCCTGGGCATCCAAGGTTGCAGAGCCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HKPRFQSGGQLV*SWASKVAEPWA Trigger: GGCCCAGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCGCTTTGGAATCTGGGTTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS GCA 72 bp | CTCCTCCAACGGCTGATCACATGTAGCTCGCCGTTCTaGGGTCTCGCAAACAGTCACTGGCCCACAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLQRLITCSSPF*GLANSHWPTAK Trigger: CTTGGCTGTGGGCCAGTGACTGTTTGCGAGACCGCAGAACGGCGAGCTACATGTGATCAGCCGTTGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS GCA 72 bp | GCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACTTaGTGGCAACCGAGAGGCCACAGGAGCTTAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: ANSHWPTAKERT*WQPRGHRSLGL Trigger: CAGTCCTAAGCTCCTGTGGCCTCTCGGTTGCCAGCAAGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS CCA 72 bp | TCCCCCATAAACCCAGATTCCAAAGCGGCGGACAGCTaGTCTGATCCTGGGCATCCAAGGTTGCAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SPINPDSKAADS*SDPGHPRLQSP Trigger: AGGGCTCTGCAACCTTGGATGCCCAGGATCAGACCAGCTGTCCGCCGCTTTGGAATCTGGGTTTATGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CAA 72 bp | CGCAAACAGTCACTGGCCCACAGCCAAGGAAAGGACTaGCTGGCAACCGAGAGGCCACAGGAGCTTAGGACT | + |
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Preference number: 6 (lower is better) Translates to: RKQSLAHSQGKD*LATERPQELRT Trigger: AGTCCTAAGCTCCTGTGGCCTCTCGGTTGCCAGCAAGTCCTTTCCTTGGCTGTGGGCCAGTGACTGTTTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS TCA 72 bp | AGGCAAAAACTCAAGGAGCCGATTTCCTCCTCGCACTaGGGTCTGAGAACGGGAAGAGGCTCCGAGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RQKLKEPISSSH*GLRTGRGSEAG Trigger: TCCAGCCTCGGAGCCTCTTCCCGTTCTCAGACCTCAGTGCGAGGAGGAAATCGGCTCCTTGAGTTTTTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556528.1 |
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| CDS GCA 72 bp | CTGGAGTCACCTTCGCACCGGCAGCAACTTGAGAAGTaGAGGAGATGTGTTCCTTCAGCAGCTGAGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LESPSHRQQLEK*RRCVPSAAEGT Trigger: TGTCCCCTCAGCTGCTGAAGGAACACATCTCCTGCACTTCTCAAGTTGCTGCCGGTGCGAAGGTGACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS GCA 72 bp | CTGCTGACATTTGCTGAGCAGCTACGGAGCCCAAACTaGAGAATCTGGAGTCACCTTCGCACCGGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LLTFAEQLRSPN*RIWSHLRTGSN Trigger: GTTGCTGCCGGTGCGAAGGTGACTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAATGTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS TCA 72 bp | CTGAGGAGCCTTGCTTCTGGACCTGCTGACATTTGCTaGGCAGCTACGGAGCCCAAACTGCAGAATCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRSLASGPADIC*AATEPKLQNLE Trigger: CTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAATGTCAGCAGGTCCAGAAGCAAGGCTCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CCA 72 bp | TTTGCTGAGCAGCTACGGAGCCCAAACTGCAGAATCTaGAGTCACCTTCGCACCGGCAGCAACTTGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FAEQLRSPNCRI*SHLRTGSNLRS Trigger: ACTTCTCAAGTTGCTGCCGGTGCGAAGGTGACTCCAGATTCTGCAGTTTGGGCTCCGTAGCTGCTCAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CAA 90 bp | ACTCTAAGCCTGAAGGCCATGGGTGAGTCAGAAGTAAATCAGTCCTaGTGTGGGCCTGCCATTTGTGATGGTGACTTCAGAGGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TLSLKAMGESEVNQS*CGPAICDGDFRGPA Trigger: AGCAGGACCTCTGAAGTCACCATCACAAATGGCAGGCCCACACAAGGACTGATTTACTTCTGACTCACCCATGGCCTTCAGGCTTAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS CCA 72 bp | ACCAGCAAGGCTCAGAGGACTCTTAAGAGCCAGCCATaGGCATCTTTTTCCAATCCCACACTCAGTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: TSKAQRTLKSQP*ASFSNPTLSDV Trigger: AACATCACTGAGTGTGGGATTGGAAAAAGATGCCCATGGCTGGCTCTTAAGAGTCCTCTGAGCCTTGCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS CAA 72 bp | CTGAAGGCCATGGGTGAGTCAGAAGTAAATCAGTCCTaGTGTGGGCCTGCCATTTGTGATGGTGACTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LKAMGESEVNQS*CGPAICDGDFR Trigger: TCTGAAGTCACCATCACAAATGGCAGGCCCACACAAGGACTGATTTACTTCTGACTCACCCATGGCCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS TCA 72 bp | TCCAATCCCACACTCAGTGATGTTGTGTTGGTAACTTaGAGTCAGCCATGGCAGGAGTGTTTACACCATGGG | + |
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Preference number: 6 (lower is better) Translates to: SNPTLSDVVLVT*SQPWQECLHHG Trigger: CCCATGGTGTAAACACTCCTGCCATGGCTGACTTCAAGTTACCAACACAACATCACTGAGTGTGGGATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS TCA 72 bp | CCAGCCATGGGCATCTTTTTCCAATCCCACACTCAGTaGTGTTGTGTTGGTAACTTGAAGTCAGCCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: PAMGIFFQSHTQ*CCVGNLKSAMA Trigger: TGCCATGGCTGACTTCAAGTTACCAACACAACATCACTGAGTGTGGGATTGGAAAAAGATGCCCATGGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS CCA 72 bp | CACATAACTGCCCGCTCCAGCAGCACAGGCCCTGGCTaGTTGTTATGCTTTCCAATAAGAATCAAATTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HITARSSSTGPG*LLCFPIRIKLE Trigger: TTCCAATTTGATTCTTATTGGAAAGCATAACAACCAGCCAGGGCCTGTGCTGCTGGAGCGGGCAGTTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CAA 90 bp | TCCCTGCACATAACTGCCCGCTCCAGCAGCACAGGCCCTGGCTGGTaGTTATGCTTTCCAATAAGAATCAAATTGGAAAACAGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SLHITARSSSTGPGW*LCFPIRIKLENSFQ Trigger: TTGGAAACTGTTTTCCAATTTGATTCTTATTGGAAAGCATAACAACCAGCCAGGGCCTGTGCTGCTGGAGCGGGCAGTTATGTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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| CDS CAA 72 bp | CAAAGAATGCACTACCAGGCCAAAACCTTGGAGGAGTaGAGAGCCCAGCAAGTACTGCAAAACATAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QRMHYQAKTLEE*RAQQVLQNISK Trigger: CTTGCTTATGTTTTGCAGTACTTGCTGGGCTCTCAACTCCTCCAAGGTTTTGGCCTGGTAGTGCATTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555282.1 ENST00000662137.1 |
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| CDS CAA 72 bp | ATAACTGCCCGCTCCAGCAGCACAGGCCCTGGCTGGTaGTTATGCTTTCCAATAAGAATCAAATTGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: ITARSSSTGPGW*LCFPIRIKLEN Trigger: GTTTTCCAATTTGATTCTTATTGGAAAGCATAACAACCAGCCAGGGCCTGTGCTGCTGGAGCGGGCAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662137.1 |
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