Pregenerated sensors for LINC02688 (Homo sapiens)
Ensembl gene IDs: ENSG00000254872Ensembl transcript IDs: ENST00000534584.2, ENST00000617529.1, ENST00000625571.1, ENST00000627955.1, ENST00000636387.1, ENST00000636745.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTCCATGGTGTCCAGGCAGCCTGCCCTGGCCCGGCCCCAGGTGGTaGCTGGCATGCAGAGGACCGGAAGGCGGCAAGACCCCCGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GPWCPGSLPWPGPRW*LACRGPEGGKTPAA Trigger: GGCAGCGGGGGTCTTGCCGCCTTCCGGTCCTCTGCATGCCAGGCACCACCTGGGGCCGGGCCAGGGCAGGCTGCCTGGACACCATGGACC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 90 bp | GACGTCGTCCAGCTCCCCAGACTCGGCCCTCCCGGAGTCCAGGGCTaGCAGGCTGCCCTCTGGCCCGGGGGAAGTGCCTGGGTTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: DVVQLPRLGPPGVQG*QAALWPGGSAWVEM Trigger: CATCTCAACCCAGGCACTTCCCCCGGGCCAGAGGGCAGCCTGGCAGCCCTGGACTCCGGGAGGGCCGAGTCTGGGGAGCTGGACGACGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000534584.2 ENST00000625571.1 ENST00000636745.1 |
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| CDS GCA 90 bp | CCCAGGAGGGCCTCACCTTCGGCCCCTCCCAGCAGTAGCACCAACTaGCGTGGCCGCCCACACTACCCTCGTCCCGACGGCCACCCACAC | + |
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Preference number: 5 (lower is better) Translates to: PRRASPSAPPSSSTN*RGRPHYPRPDGHPH Trigger: GTGTGGGTGGCCGTCGGGACGAGGGTAGTGTGGGCGGCCACGGCAGTTGGTGCTACTGCTGGGAGGGGCCGAAGGTGAGGCCCTCCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | GTGCCCAGGGAGGTGCCACCTCTGACACGGACAGGGCTTCAGGCTTaGGACACAGGTGCCGGGGAAGCAGAAGGGAAAGGGAGGGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VPREVPPLTRTGLQA*DTGAGEAEGKGRGR Trigger: CCGCCCCCTCCCTTTCCCTTCTGCTTCCCCGGCACCTGTGTCCCAAGCCTGAAGCCCTGTCCGTGTCAGAGGTGGCACCTCCCTGGGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS TCA 90 bp | GCGGTGCCATCACGGCTCCAGCCTGAGCCTGGAGTGGGGACAGGATaGCGAGAGCCCACCGTGCATCCCAGCGACTCTCCAGGGCACACT | + |
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Preference number: 5 (lower is better) Translates to: AVPSRLQPEPGVGTG*REPTVHPSDSPGHT Trigger: AGTGTGCCCTGGAGAGTCGCTGGGATGCACGGTGGGCTCTCGTCATCCTGTCCCCACTCCAGGCTCAGGCTGGAGCCGTGATGGCACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS GCA 90 bp | TCCAGCCTGAGCCTGGAGTGGGGACAGGATGACGAGAGCCCACCGTaGATCCCAGCGACTCTCCAGGGCACACTCTGGCTGTGGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: SSLSLEWGQDDESPP*IPATLQGTLWLWLG Trigger: TCCGAGCCACAGCCAGAGTGTGCCCTGGAGAGTCGCTGGGATGCACGGTGGGCTCTCGTCATCCTGTCCCCACTCCAGGCTCAGGCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS GCA 90 bp | AGGCCCAGCTTCGGGAGGGTTGCAGTGTCCACACACATCTCCCCCTaGAGCTCAACCAGGCGCCACGGGAGGCACCCAAACAGCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: RPSFGRVAVSTHISP*SSTRRHGRHPNSCG Trigger: CCCACAGCTGTTTGGGTGCCTCCCGTGGCGCCTGGTTGAGCTGCAGGGGGAGATGTGTGTGGACACTGCAACCCTCCCGAAGCTGGGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | CCTGGGGATGCTGGGGACTCCAGGTCCTCACTGGCCCTTCCCGGCTaGCCCGCCTTTGCTCTGCATACAGCTGGCGCTCAGCAAAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGDAGDSRSSLALPG*PAFALHTAGAQQSL Trigger: CAAGCTTTGCTGAGCGCCAGCTGTATGCAGAGCAAAGGCGGGCCAGCCGGGAAGGGCCAGTGAGGACCTGGAGTCCCCAGCATCCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | ACTTCCTCTGTCCAAGATGGGGCTGGGCCCTGGAGGAGACTCACCTaGCCCAGTCCCAGCGCAGGTCAGACAGGCCCCCTGCACCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: TSSVQDGAGPWRRLT*PSPSAGQTGPLHLF Trigger: GAACAGGTGCAGGGGGCCTGTCTGACCTGCGCTGGGACTGGGCCAGGTGAGTCTCCTCCAGGGCCCAGCCCCATCTTGGACAGAGGAAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 90 bp | GTGCCCACAGGGCCTCCCCTGGTCAGCTGGGAGGGCTCTGCTAGCTaGCTCCTATCCCTAAGTGGACACAGTCCCTGGATCCTTCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VPTGPPLVSWEGSAS*LLSLSGHSPWILPP Trigger: TGGGGGAAGGATCCAGGGACTGTGTCCACTTAGGGATAGGAGGCAGCTAGCAGAGCCCTCCCAGCTGACCAGGGGAGGCCCTGTGGGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | AGTCCAGCTCCACTGCCCTCCCTCCTGCTGGCATCTTCCAGGAACTaGCAGGGGCAGCAGGAACCTAGGGACCCAAGAGCCAGGAGACGG | + |
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Preference number: 5 (lower is better) Translates to: SPAPLPSLLLASSRN*QGQQEPRDPRARRR Trigger: CCGTCTCCTGGCTCTTGGGTCCCTAGGTTCCTGCTGCCCCTGCCAGTTCCTGGAAGATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS TCA 90 bp | GGGCACTTTGTCAGCCATCAAACGGGGCAAGACGCTCCACCTGGGTaGCACAGAGCCGCACAGCCCTGCACCTGTACCTACACCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GHFVSHQTGQDAPPG*HRAAQPCTCTYTWG Trigger: GCCCCAGGTGTAGGTACAGGTGCAGGGCTGTGCGGCTCTGTGTCACCCAGGTGGAGCGTCTTGCCCCGTTTGATGGCTGACAAAGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | ATCCTGTTGTGGGCGCAAGTCCAGCTCCACTGCCCTCCCTCCTGCTaGCATCTTCCAGGAACTGGCAGGGGCAGCAGGAACCTAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: ILLWAQVQLHCPPSC*HLPGTGRGSRNLGT Trigger: GGTCCCTAGGTTCCTGCTGCCCCTGCCAGTTCCTGGAAGATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | ACCCCGCAGCCTCGCCCTGACTGCGTTTATGGCCAGATCCTGTTGTaGGCGCAAGTCCAGCTCCACTGCCCTCCCTCCTGCTGGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: TPQPRPDCVYGQILL*AQVQLHCPPSCWHL Trigger: AAGATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGATCTGGCCATAAACGCAGTCAGGGCGAGGCTGCGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 90 bp | TGCGTTTATGGCCAGATCCTGTTGTGGGCGCAAGTCCAGCTCCACTaGCCTCCCTCCTGCTGGCATCTTCCAGGAACTGGCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CVYGQILLWAQVQLH*PPSCWHLPGTGRGS Trigger: GCTGCCCCTGCCAGTTCCTGGAAGATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGATCTGGCCATAAACGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | TCTCCTGCTGTCCAGATTGTAGGACTGGGGCGGCATCATCAAGAGTaGAATGTGACGTCGTCCAGCTCCCCAGACTCGGCCCTCCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: SPAVQIVGLGRHHQE*NVTSSSSPDSALPE Trigger: CTCCGGGAGGGCCGAGTCTGGGGAGCTGGACGACGTCACATTCCACTCTTGATGATGCCGCCCCAGTCCTACAATCTGGACAGCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS CCA 90 bp | CTCACTGGCCCTTCCCGGCTGGCCCGCCTTTGCTCTGCATACAGCTaGCGCTCAGCAAAGCTTGCCGCTGCTGATGGACAATTCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: LTGPSRLARLCSAYS*RSAKLAAADGQFHS Trigger: GCTATGGAATTGTCCATCAGCAGCGGCAAGCTTTGCTGAGCGCCAGCTGTATGCAGAGCAAAGGCGGGCCAGCCGGGAAGGGCCAGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | CTCCTGCCTTTCCTGACTATCAACTTCCTCTGTCCAAGATGGGGCTaGGCCCTGGAGGAGACTCACCTGGCCCAGTCCCAGCGCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLPFLTINFLCPRWG*ALEETHLAQSQRRS Trigger: TGACCTGCGCTGGGACTGGGCCAGGTGAGTCTCCTCCAGGGCCCAGCCCCATCTTGGACAGAGGAAGTTGATAGTCAGGAAAGGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | TCAAGGGCACTTTGTCAGCCATCAAACGGGGCAAGACGCTCCACCTaGGTGACACAGAGCCGCACAGCCCTGCACCTGTACCTACACCTG | + |
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Preference number: 5 (lower is better) Translates to: SRALCQPSNGARRST*VTQSRTALHLYLHL Trigger: CAGGTGTAGGTACAGGTGCAGGGCTGTGCGGCTCTGTGTCACCCAGGTGGAGCGTCTTGCCCCGTTTGATGGCTGACAAAGTGCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | GCTGGGGTGAGGGTAATTTGGGGTGGTATGTTAGGGTCAGGACCCTaGGACCACGCTGGGTCTGACGCATTCAAGGGCACTTTGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: AGVRVIWGGMLGSGP*DHAGSDAFKGTLSA Trigger: GGCTGACAAAGTGCCCTTGAATGCGTCAGACCCAGCGTGGTCCCAGGGTCCTGACCCTAACATACCACCCCAAATTACCCTCACCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS TCA 90 bp | TTGGGGTGGTATGTTAGGGTCAGGACCCTGGGACCACGCTGGGTCTaGCGCATTCAAGGGCACTTTGTCAGCCATCAAACGGGGCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LGWYVRVRTLGPRWV*RIQGHFVSHQTGQD Trigger: GTCTTGCCCCGTTTGATGGCTGACAAAGTGCCCTTGAATGCGTCAGACCCAGCGTGGTCCCAGGGTCCTGACCCTAACATACCACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 90 bp | GGGAACCTCCAGGGACCGGAGATGGAGGAAATGGGCAGCTTCTCCTaGTGTCCAGATTGTAGGACTGGGGCGGCATCATCAAGAGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: GNLQGPEMEEMGSFS*CPDCRTGAASSRVE Trigger: TTCCACTCTTGATGATGCCGCCCCAGTCCTACAATCTGGACAGCAGGAGAAGCTGCCCATTTCCTCCATCTCCGGTCCCTGGAGGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000534584.2 ENST00000625571.1 ENST00000636745.1 |
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| CDS CCA 90 bp | ATGGTCTTCCCTGAAAGGATCCGGGGAACCTCCAGGGACCGGAGATaGAGGAAATGGGCAGCTTCTCCTGCTGTCCAGATTGTAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: MVFPERIRGTSRDRR*RKWAASPAVQIVGL Trigger: CAGTCCTACAATCTGGACAGCAGGAGAAGCTGCCCATTTCCTCCATCTCCGGTCCCTGGAGGTTCCCCGGATCCTTTCAGGGAAGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000534584.2 ENST00000625571.1 ENST00000636745.1 |
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| CDS TCA 90 bp | CCCTTCAGAGCTGAAATTGTTAGAAGAGGCCACTCCTGCCTTTCCTaGCTATCAACTTCCTCTGTCCAAGATGGGGCTGGGCCCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PFRAEIVRRGHSCLS*LSTSSVQDGAGPWR Trigger: CCTCCAGGGCCCAGCCCCATCTTGGACAGAGGAAGTTGATAGTCAGGAAAGGCAGGAGTGGCCTCTTCTAACAATTTCAGCTCTGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 90 bp | GCCAGGAGACGGCCAGGATCAGCATTTGCTTCTCATTACCGGAGATaGAGGAAATGGGCAGCTTCTCCTGCTGTCCAGATTGTAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: ARRRPGSAFASHYRR*RKWAASPAVQIVGL Trigger: CAGTCCTACAATCTGGACAGCAGGAGAAGCTGCCCATTTCCTCCATCTCCGGTAATGAGAAGCAAATGCTGATCCTGGCCGTCTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 90 bp | ATTTGCTTCTCATTACCGGAGATGGAGGAAATGGGCAGCTTCTCCTaGTGTCCAGATTGTAGGACTGGGGCGGCATCATCAAGAGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: ICFSLPEMEEMGSFS*CPDCRTGAASSRVE Trigger: TTCCACTCTTGATGATGCCGCCCCAGTCCTACAATCTGGACAGCAGGAGAAGCTGCCCATTTCCTCCATCTCCGGTAATGAGAAGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | CAGCTCCCCAGACTCGGCCCTCCCGGAGTCCAGGGCTaGCAGGCTGCCCTCTGGCCCGGGGGAAGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLPRLGPPGVQG*QAALWPGGSAW Trigger: CCAGGCACTTCCCCCGGGCCAGAGGGCAGCCTGGCAGCCCTGGACTCCGGGAGGGCCGAGTCTGGGGAGCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS GCA 72 bp | CAGACTCGGCCCTCCCGGAGTCCAGGGCTGCCAGGCTaGCCTCTGGCCCGGGGGAAGTGCCTGGGGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: QTRPSRSPGLPG*PLARGKCLGRM Trigger: CATCCTCCCCAGGCACTTCCCCCGGGCCAGAGGGCAGCCTGGCAGCCCTGGACTCCGGGAGGGCCGAGTCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | GCCTCACCTTCGGCCCCTCCCAGCAGTAGCACCAACTaGCGTGGCCGCCCACACTACCCTCGTCCCGACGGC | + |
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Preference number: 6 (lower is better) Translates to: ASPSAPPSSSTN*RGRPHYPRPDG Trigger: GCCGTCGGGACGAGGGTAGTGTGGGCGGCCACGGCAGTTGGTGCTACTGCTGGGAGGGGCCGAAGGTGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | TGGGGCCCGGTGCCCATGCATCTGTCCATCGCGTTCTaGAGGGAGCAGCCTCCCAGGGACCCCACTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WGPVPMHLSIAF*REQPPRDPTAS Trigger: GGAGGCAGTGGGGTCCCTGGGAGGCTGCTCCCTGCAGAACGCGATGGACAGATGCATGGGCACCGGGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 72 bp | GTCCAAGATGGGGCTGGGCCCTGGAGGAGACTCACCTaGCCCAGTCCCAGCGCAGGTCAGACAGGCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VQDGAGPWRRLT*PSPSAGQTGPL Trigger: CAGGGGGCCTGTCTGACCTGCGCTGGGACTGGGCCAGGTGAGTCTCCTCCAGGGCCCAGCCCCATCTTGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 90 bp | CGTGCCCAGGGAGGTGCCACCTCTGACACGGACAGGGCTTCAGGCTaGGGACACAGGTGCCGGGGAAGCAGAAGGGAAAGGGAGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RAQGGATSDTDRASG*GHRCRGSRREREGA Trigger: CGCCCCCTCCCTTTCCCTTCTGCTTCCCCGGCACCTGTGTCCCAAGCCTGAAGCCCTGTCCGTGTCAGAGGTGGCACCTCCCTGGGCACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | GGCATGCAGAGGACCGGAAGGCGGCAAGACCCCCGCTaGCAACGCCCCTCTCCGGCCCAGATAAGGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GMQRTGRRQDPR*QRPSPAQIRFW Trigger: CCAGAACCTTATCTGGGCCGGAGAGGGGCGTTGGCAGCGGGGGTCTTGCCGCCTTCCGGTCCTCTGCATGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | CCTCACTGGCCCTTCCCGGCTGGCCCGCCTTTGCTCTaGATACAGCTGGCGCTCAGCAAAGCTTGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PHWPFPAGPPLL*IQLALSKACRC Trigger: GCAGCGGCAAGCTTTGCTGAGCGCCAGCTGTATGCAGAGCAAAGGCGGGCCAGCCGGGAAGGGCCAGTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 90 bp | CCCACCCCGCAGCCTCGCCCTGACTGCGTTTATGGCCAGATCCTGTaGTGGGCGCAAGTCCAGCTCCACTGCCCTCCCTCCTGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PTPQPRPDCVYGQIL*WAQVQLHCPPSCWH Trigger: ATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGATCTGGCCATAAACGCAGTCAGGGCGAGGCTGCGGGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | AGCCTGGAGTGGGGACAGGATGACGAGAGCCCACCGTaGATCCCAGCGACTCTCCAGGGCACACTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLEWGQDDESPP*IPATLQGTLWL Trigger: CAGCCAGAGTGTGCCCTGGAGAGTCGCTGGGATGCACGGTGGGCTCTCGTCATCCTGTCCCCACTCCAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS CCA 72 bp | TGGGCGCAAGTCCAGCTCCACTGCCCTCCCTCCTGCTaGCATCTTCCAGGAACTGGCAGGGGCAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WAQVQLHCPPSC*HLPGTGRGSRN Trigger: GTTCCTGCTGCCCCTGCCAGTTCCTGGAAGATGCCAGCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | TTCGGGAGGGTTGCAGTGTCCACACACATCTCCCCCTaGAGCTCAACCAGGCGCCACGGGAGGCACCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: FGRVAVSTHISP*SSTRRHGRHPN Trigger: GTTTGGGTGCCTCCCGTGGCGCCTGGTTGAGCTGCAGGGGGAGATGTGTGTGGACACTGCAACCCTCCCGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | CCTGGCCCAGTCCCAGCGCAGGTCAGACAGGCCCCCTaGACCTGTTCCCTGCCTTTTTGGGACCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PGPVPAQVRQAP*TCSLPFWDLSF Trigger: GAAACTGAGGTCCCAAAAAGGCAGGGAACAGGTGCAGGGGGCCTGTCTGACCTGCGCTGGGACTGGGCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 72 bp | GAGGTGCCACCTCTGACACGGACAGGGCTTCAGGCTTaGGACACAGGTGCCGGGGAAGCAGAAGGGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: EVPPLTRTGLQA*DTGAGEAEGKG Trigger: CCCTTTCCCTTCTGCTTCCCCGGCACCTGTGTCCCAAGCCTGAAGCCCTGTCCGTGTCAGAGGTGGCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 72 bp | CCTCGCCCTGACTGCGTTTATGGCCAGATCCTGTTGTaGGCGCAAGTCCAGCTCCACTGCCCTCCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PRPDCVYGQILL*AQVQLHCPPSC Trigger: GCAGGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGATCTGGCCATAAACGCAGTCAGGGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 72 bp | GGAGGTGCCACCTCTGACACGGACAGGGCTTCAGGCTaGGGACACAGGTGCCGGGGAAGCAGAAGGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GGATSDTDRASG*GHRCRGSRRER Trigger: CCTTTCCCTTCTGCTTCCCCGGCACCTGTGTCCCAAGCCTGAAGCCCTGTCCGTGTCAGAGGTGGCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 72 bp | CAGCCTCGCCCTGACTGCGTTTATGGCCAGATCCTGTaGTGGGCGCAAGTCCAGCTCCACTGCCCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QPRPDCVYGQIL*WAQVQLHCPPS Trigger: GGAGGGAGGGCAGTGGAGCTGGACTTGCGCCCACAACAGGATCTGGCCATAAACGCAGTCAGGGCGAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 90 bp | TCAGGACCCTGGGACCACGCTGGGTCTGACGCATTCAAGGGCACTTaGTCAGCCATCAAACGGGGCAAGACGCTCCACCTGGGTGACACA | + |
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Preference number: 6 (lower is better) Translates to: SGPWDHAGSDAFKGT*SAIKRGKTLHLGDT Trigger: TGTGTCACCCAGGTGGAGCGTCTTGCCCCGTTTGATGGCTGACAAAGTGCCCTTGAATGCGTCAGACCCAGCGTGGTCCCAGGGTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 72 bp | GTCCAGATTGTAGGACTGGGGCGGCATCATCAAGAGTaGAATGTGACGTCGTCCAGCTCCCCAGACTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VQIVGLGRHHQE*NVTSSSSPDSA Trigger: GGCCGAGTCTGGGGAGCTGGACGACGTCACATTCCACTCTTGATGATGCCGCCCCAGTCCTACAATCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000534584.2 ENST00000617529.1 ENST00000625571.1 ENST00000627955.1 ENST00000636387.1 ENST00000636745.1 |
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| CDS CAA 72 bp | TGGGACCACGCTGGGTCTGACGCATTCAAGGGCACTTaGTCAGCCATCAAACGGGGCAAGACGCTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: WDHAGSDAFKGT*SAIKRGKTLHL Trigger: CAGGTGGAGCGTCTTGCCCCGTTTGATGGCTGACAAAGTGCCCTTGAATGCGTCAGACCCAGCGTGGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | GGAAGTCATTTCTTCCAGGCCCAGCTTCGGGAGGGTTaGAGTGTCCACACACATCTCCCCCTGCAGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: GSHFFQAQLREG*SVHTHLPLQLN Trigger: GTTGAGCTGCAGGGGGAGATGTGTGTGGACACTGCAACCCTCCCGAAGCTGGGCCTGGAAGAAATGACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | GGACCCAAGAGCCAGGAGACGGCCAGGATCAGCATTTaGTTCTCATTACCGGAGATGGAGGAAATGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPKSQETARISI*FSLPEMEEMGS Trigger: GCTGCCCATTTCCTCCATCTCCGGTAATGAGAAGCAAATGCTGATCCTGGCCGTCTCCTGGCTCTTGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CCA 72 bp | AGGGTAATTTGGGGTGGTATGTTAGGGTCAGGACCCTaGGACCACGCTGGGTCTGACGCATTCAAGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: RVIWGGMLGSGP*DHAGSDAFKGT Trigger: AGTGCCCTTGAATGCGTCAGACCCAGCGTGGTCCCAGGGTCCTGACCCTAACATACCACCCCAAATTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS CAA 90 bp | GAAATGCTGTCAGCATCGCCACCCTTGGCCCCTTCAGAGCTGAAATaGTTAGAAGAGGCCACTCCTGCCTTTCCTGACTATCAACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EMLSASPPLAPSELK*LEEATPAFPDYQLP Trigger: AGGAAGTTGATAGTCAGGAAAGGCAGGAGTGGCCTCTTCTAACAATTTCAGCTCTGAAGGGGCCAAGGGTGGCGATGCTGACAGCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS TCA 72 bp | GCTGAAATTGTTAGAAGAGGCCACTCCTGCCTTTCCTaGCTATCAACTTCCTCTGTCCAAGATGGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AEIVRRGHSCLS*LSTSSVQDGAG Trigger: CCCAGCCCCATCTTGGACAGAGGAAGTTGATAGTCAGGAAAGGCAGGAGTGGCCTCTTCTAACAATTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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| CDS GCA 72 bp | CTGAGACAATTATTAGTATCACCAGGTGAATATCAATaGCTGGGTAGGGAGTTCCCCGGAGCAGGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LRQLLVSPGEYQ*LGREFPGAGRW Trigger: CCACCTGCCTGCTCCGGGGAACTCCCTACCCAGGCATTGATATTCACCTGGTGATACTAATAATTGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000617529.1 ENST00000627955.1 ENST00000636387.1 |
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