Pregenerated sensors for LINC02685 (Homo sapiens)
Ensembl gene IDs: ENSG00000254654Ensembl transcript IDs: ENST00000525114.2, ENST00000654603.1, ENST00000656313.1, ENST00000670250.1, ENST00000670262.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCAGCAGGCGGGCAGGCAGGCAGGGGTGAACCGGAGGCACGGGTaGCTGGAGGCTGCCTGGAGTCTGGCTCAGCCAGCAGGGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: QQQAGRQAGVNRRHG*LEAAWSLAQPAGVT Trigger: TGTCACCCCTGCTGGCTGAGCCAGACTCCAGGCAGCCTCCAGCCACCCGTGCCTCCGGTTCACCCCTGCCTGCCTGCCCGCCTGCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656313.1 ENST00000670262.1 |
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| CDS GCA 90 bp | TGGTGCGACGCTGGCAGCACTGGAGAGAGTGCCAGGAAGGAGTCCTaGAGAAACCTTCGGGCCGGAGTGTGTAAGGGGTGTGTGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: WCDAGSTGESARKES*RNLRAGVCKGCVGA Trigger: TGCACCCACACACCCCTTACACACTCCGGCCCGAAGGTTTCTGCAGGACTCCTTCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS TCA 90 bp | CTTCAGAGGCAGGAAGCCACTTCCTGTGGTCTCAATGGTGCCCTGTaGAAAACCAGGCCCTGGCCCAGCAGCCAAGAGGGCCGGGATAGG | + |
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Preference number: 5 (lower is better) Translates to: LQRQEATSCGLNGAL*KTRPWPSSQEGRDR Trigger: CCTATCCCGGCCCTCTTGGCTGCTGGGCCAGGGCCTGGTTTTTCACAGGGCACCATTGAGACCACAGGAAGTGGCTTCCTGCCTCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000656313.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS TCA 90 bp | GGCACGTGGCCTTCCTGCACTTCCTGCATGCCTGAGATTGCGCTCTaGGGCTGTTGCTTCAGACCGAGCCTCAGATGGCCAGAGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GTWPSCTSCMPEIAL*GCCFRPSLRWPEGL Trigger: GAGACCCTCTGGCCATCTGAGGCTCGGTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | GTGCTGTCTTCAGAGGCAGGAAGCCACTTCCTGTGGTCTCAATGGTaGCCTGTGAAAAACCAGGCCCTGGCCCAGCAGCCAAGAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: VLSSEAGSHFLWSQW*PVKNQALAQQPRGP Trigger: CGGCCCTCTTGGCTGCTGGGCCAGGGCCTGGTTTTTCACAGGGCACCATTGAGACCACAGGAAGTGGCTTCCTGCCTCTGAAGACAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000656313.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | ACCACACACTGCCTGGCTCATCCCTCCCTTAGGGTCTCACTCAGCTaGTGTCTCTGGCTGCTACCACCATGCTGGCCTCAGGAGGTCACT | + |
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Preference number: 5 (lower is better) Translates to: TTHCLAHPSLRVSLS*CLWLLPPCWPQEVT Trigger: AGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGCAGCTGAGTGAGACCCTAAGGGAGGGATGAGCCAGGCAGTGTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | TCCCTTAGGGTCTCACTCAGCTGCTGTCTCTGGCTGCTACCACCATaGTGGCCTCAGGAGGTCACTGTGATCATCACAGTCCCTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLRVSLSCCLWLLPP*WPQEVTVIITVPSA Trigger: AGCAGAAGGGACTGTGATGATCACAGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGCAGCTGAGTGAGACCCTAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | GGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTTGCAAAGCCTTaGAGTGTGGTGCGACGCTGGCAGCACTGGAGAGAGTGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GQRVSFTLEGKFAKP*SVVRRWQHWRECQE Trigger: TTCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | GCTCAGCCAGCAGGGGTGACAAGAGCGCTTTCTAGGGCAGTTGTGTaGTGTCTTCAGAGGCAGGAAGCCACTTCCTGTGGTCTCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: AQPAGVTRALSRAVV*CLQRQEATSCGLNG Trigger: ACCATTGAGACCACAGGAAGTGGCTTCCTGCCTCTGAAGACAGCACACAACTGCCCTAGAAAGCGCTCTTGTCACCCCTGCTGGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656313.1 ENST00000670262.1 |
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| CDS TCA 90 bp | GCTGTCTCTGGCTGCTACCACCATGCTGGCCTCAGGAGGTCACTGTaGTCATCACAGTCCCTTCTGCTTTGGGCTGAACCCTTTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: AVSGCYHHAGLRRSL*SSQSLLLWAEPFSL Trigger: AAGGGAAAAGGGTTCAGCCCAAAGCAGAAGGGACTGTGATGATCACAGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | ACTCCAGCAGCAGGGGTGACAAGAGCGCTTTCTAGGGCAGTTGTGTaGTGTCTTCAGAGGCAGGAAGCCACTTCCTGTGGTCTCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: TPAAGVTRALSRAVV*CLQRQEATSCGLNG Trigger: ACCATTGAGACCACAGGAAGTGGCTTCCTGCCTCTGAAGACAGCACACAACTGCCCTAGAAAGCGCTCTTGTCACCCCTGCTGCTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525114.2 ENST00000670250.1 |
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| CDS GCA 90 bp | GAGGTGAGGAAAACGAGATGTGTAGGGAGAACTCCAACCACACACTaGCTGGCTCATCCCTCCCTTAGGGTCTCACTCAGCTGCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: EVRKTRCVGRTPTTH*LAHPSLRVSLSCCL Trigger: GAGACAGCAGCTGAGTGAGACCCTAAGGGAGGGATGAGCCAGGCAGTGTGTGGTTGGAGTTCTCCCTACACATCTCGTTTTCCTCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | TCTCCTTCACTTTGGAAGGAAAGTTTGCAAAGCCTTGCAGTGTGGTaGGACGCTGGCAGCACTGGAGAGAGTGCCAGGAAGGAGTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SPSLWKESLQSLAVW*DAGSTGESARKESC Trigger: GCAGGACTCCTTCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | AGCCTCAGATGGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTTaGAAAGCCTTGCAGTGTGGTGCGACGCTGGCAGCACTGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLRWPEGLLHFGRKV*KALQCGATLAALER Trigger: TCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCATCTGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | AGTGAGATAACGTATGTGGCACGTGGCCTTCCTGCACTTCCTGCATaGCTGAGATTGCGCTCTGAGGCTGTTGCTTCAGACCGAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SEITYVARGLPALPA*LRLRSEAVASDRAS Trigger: TGAGGCTCGGTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGCCACATACGTTATCTCACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 90 bp | TTGCTTCAGACCGAGCCTCAGATGGCCAGAGGGTCTCCTTCACTTTaGAAGGAAAGTTTGCAAAGCCTTGCAGTGTGGTGCGACGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LLQTEPQMARGSPSL*KESLQSLAVWCDAG Trigger: GCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCATCTGAGGCTCGGTCTGAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 90 bp | TCTCTACCAGCAGGGGTGACAAGAGCGCTTTCTAGGGCAGTTGTGTaGTGTCTTCAGAGGCAGGAAGCCACTTCCTGTGGTCTCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: SLPAGVTRALSRAVV*CLQRQEATSCGLNG Trigger: ACCATTGAGACCACAGGAAGTGGCTTCCTGCCTCTGAAGACAGCACACAACTGCCCTAGAAAGCGCTCTTGTCACCCCTGCTGGTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654603.1 |
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| CDS TCA 90 bp | CACCAACATAAGACTTTAAAGACATTTCCTGCTAATGAGATTAAGTaGGATAACGTATGTGGCACGTGGCCTTCCTGCACTTCCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: HQHKTLKTFPANEIK*DNVCGTWPSCTSCM Trigger: CATGCAGGAAGTGCAGGAAGGCCACGTGCCACATACGTTATCTCACTTAATCTCATTAGCAGGAAATGTCTTTAAAGTCTTATGTTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | GGCAGGGGTGAACCGGAGGCACGGGTGGCTGGAGGCTaGCTGGAGTCTGGCTCAGCCAGCAGGGGTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: GRGEPEARVAGG*LESGSASRGDK Trigger: CTTGTCACCCCTGCTGGCTGAGCCAGACTCCAGGCAGCCTCCAGCCACCCGTGCCTCCGGTTCACCCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656313.1 ENST00000670262.1 |
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| CDS GCA 72 bp | TGCCTGGCTCATCCCTCCCTTAGGGTCTCACTCAGCTaGTGTCTCTGGCTGCTACCACCATGCTGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CLAHPSLRVSLS*CLWLLPPCWPQ Trigger: CTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGCAGCTGAGTGAGACCCTAAGGGAGGGATGAGCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | GCTGGCAGCACTGGAGAGAGTGCCAGGAAGGAGTCCTaGAGAAACCTTCGGGCCGGAGTGTGTAAGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AGSTGESARKES*RNLRAGVCKGC Trigger: ACACCCCTTACACACTCCGGCCCGAAGGTTTCTGCAGGACTCCTTCCTGGCACTCTCTCCAGTGCTGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | CATCCCTCCCTTAGGGTCTCACTCAGCTGCTGTCTCTaGCTGCTACCACCATGCTGGCCTCAGGAGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: HPSLRVSLSCCL*LLPPCWPQEVT Trigger: AGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGCAGCTGAGTGAGACCCTAAGGGAGGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | GCAAAGCCTTGCAGTGTGGTGCGACGCTGGCAGCACTaGAGAGAGTGCCAGGAAGGAGTCCTGCAGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: AKPCSVVRRWQH*RECQEGVLQKP Trigger: AGGTTTCTGCAGGACTCCTTCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 72 bp | GCACGTGGCCTTCCTGCACTTCCTGCATGCCTGAGATaGCGCTCTGAGGCTGTTGCTTCAGACCGAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ARGLPALPACLR*RSEAVASDRAS Trigger: TGAGGCTCGGTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 90 bp | ACGTATGTGGCACGTGGCCTTCCTGCACTTCCTGCATGCCTGAGATaGCGCTCTGAGGCTGTTGCTTCAGACCGAGCCTCAGATGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TYVARGLPALPACLR*RSEAVASDRASDGQ Trigger: CTGGCCATCTGAGGCTCGGTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGCCACATACGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS TCA 72 bp | GGCTGCTACCACCATGCTGGCCTCAGGAGGTCACTGTaGTCATCACAGTCCCTTCTGCTTTGGGCTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: GCYHHAGLRRSL*SSQSLLLWAEP Trigger: GGGTTCAGCCCAAAGCAGAAGGGACTGTGATGATCACAGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS TCA 72 bp | ATGTGGCACGTGGCCTTCCTGCACTTCCTGCATGCCTaGGATTGCGCTCTGAGGCTGTTGCTTCAGACCGAG | + |
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Preference number: 6 (lower is better) Translates to: MWHVAFLHFLHA*DCALRLLLQTE Trigger: CTCGGTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGCCACAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 90 bp | TGGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTTGCAAAGCCTaGCAGTGTGGTGCGACGCTGGCAGCACTGGAGAGAGTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WPEGLLHFGRKVCKA*QCGATLAALERVPG Trigger: TCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 90 bp | GAGCCTCAGATGGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTaGCAAAGCCTTGCAGTGTGGTGCGACGCTGGCAGCACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: EPQMARGSPSLWKES*QSLAVWCDAGSTGE Trigger: CTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCATCTGAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | ACGTATGTGGCACGTGGCCTTCCTGCACTTCCTGCATaGCTGAGATTGCGCTCTGAGGCTGTTGCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TYVARGLPALPA*LRLRSEAVASD Trigger: GTCTGAAGCAACAGCCTCAGAGCGCAATCTCAGGCATGCAGGAAGTGCAGGAAGGCCACGTGCCACATACGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | TCACTCAGCTGCTGTCTCTGGCTGCTACCACCATGCTaGCCTCAGGAGGTCACTGTGATCATCACAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLSCCLWLLPPC*PQEVTVIITVP Trigger: AGGGACTGTGATGATCACAGTGACCTCCTGAGGCCAGCATGGTGGTAGCAGCCAGAGACAGCAGCTGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 90 bp | GTTGCTTCAGACCGAGCCTCAGATGGCCAGAGGGTCTCCTTCACTTaGGAAGGAAAGTTTGCAAAGCCTTGCAGTGTGGTGCGACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VASDRASDGQRVSFT*EGKFAKPCSVVRRW Trigger: CCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCATCTGAGGCTCGGTCTGAAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS TCA 72 bp | AGCCGAGATTGTGCAATTGCACTCCAGCAGCAGGGGTaGCAAGAGCGCTTTCTAGGGCAGTTGTGTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRDCAIALQQQG*QERFLGQLCAV Trigger: GACAGCACACAACTGCCCTAGAAAGCGCTCTTGTCACCCCTGCTGCTGGAGTGCAATTGCACAATCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525114.2 ENST00000670250.1 |
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| CDS GCA 72 bp | GGACCATGGCTGATGCTGACTATGTATGATGTGGCCTaGTCCTGGCTGCTGGGGCTGTTTGTCCCCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: GPWLMLTMYDVA*SWLLGLFVPKH Trigger: ATGTTTGGGGACAAACAGCCCCAGCAGCCAGGAGCAGGCCACATCATACATAGTCAGCATCAGCCATGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | CTTTGGAAGGAAAGTTTGCAAAGCCTTGCAGTGTGGTaGGACGCTGGCAGCACTGGAGAGAGTGCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LWKESLQSLAVW*DAGSTGESARK Trigger: CTTCCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | TGGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTTaGAAAGCCTTGCAGTGTGGTGCGACGCTGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WPEGLLHFGRKV*KALQCGATLAA Trigger: TGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | GCAGAAACCTTCGGGCCGGAGTGTGTAAGGGGTGTGTaGGTGCATATGTGTGTGTGCATGTGTGTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: AETFGPECVRGV*VHMCVCMCVIW Trigger: CCAGATCACACACATGCACACACACATATGCACCCACACACCCCTTACACACTCCGGCCCGAAGGTTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | TCACTTTGGAAGGAAAGTTTGCAAAGCCTTGCAGTGTaGTGCGACGCTGGCAGCACTGGAGAGAGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLWKESLQSLAV*CDAGSTGESAR Trigger: CCTGGCACTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CAA 72 bp | TTGAACCTGGGAGGCGGAGCTTGCAATGAGCCGAGATaGTGCAATTGCACTCCAGCAGCAGGGGTGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: LNLGGGACNEPR*CNCTPAAGVTR Trigger: TCTTGTCACCCCTGCTGCTGGAGTGCAATTGCACAATCTCGGCTCATTGCAAGCTCCGCCTCCCAGGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525114.2 ENST00000670250.1 |
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| CDS CAA 72 bp | ATGGCCAGAGGGTCTCCTTCACTTTGGAAGGAAAGTTaGCAAAGCCTTGCAGTGTGGTGCGACGCTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MARGSPSLWKES*QSLAVWCDAGS Trigger: GCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGACCCTCTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | AAAACGAGATGTGTAGGGAGAACTCCAACCACACACTaGCTGGCTCATCCCTCCCTTAGGGTCTCACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KTRCVGRTPTTH*LAHPSLRVSLS Trigger: GCTGAGTGAGACCCTAAGGGAGGGATGAGCCAGGCAGTGTGTGGTTGGAGTTCTCCCTACACATCTCGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | GTCTCCTTCACTTTGGAAGGAAAGTTTGCAAAGCCTTaGAGTGTGGTGCGACGCTGGCAGCACTGGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VSFTLEGKFAKP*SVVRRWQHWRE Trigger: CTCTCTCCAGTGCTGCCAGCGTCGCACCACACTGCAAGGCTTTGCAAACTTTCCTTCCAAAGTGAAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | TGGCTGATGCTGACTATGTATGATGTGGCCTGCTCCTaGCTGCTGGGGCTGTTTGTCCCCAAACATATGTTG | + |
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Preference number: 6 (lower is better) Translates to: WLMLTMYDVACS*LLGLFVPKHML Trigger: CAACATATGTTTGGGGACAAACAGCCCCAGCAGCCAGGAGCAGGCCACATCATACATAGTCAGCATCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS GCA 72 bp | GCCTCAGGAGGTCACTGTGATCATCACAGTCCCTTCTaGTTTGGGCTGAACCCTTTTCCCTTAGTTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ASGGHCDHHSPF*FGLNPFPLVPF Trigger: AAAGGGAACTAAGGGAAAAGGGTTCAGCCCAAAGCAGAAGGGACTGTGATGATCACAGTGACCTCCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670262.1 |
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| CDS CCA 72 bp | AAGCTCAGTTTCCAGCTCCCAGAGATCCCGTGGAAGTaGCAAAGACATCTACAAGCCTCTGATTCTCTACCC | + |
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Preference number: 6 (lower is better) Translates to: KLSFQLPEIPWK*QRHLQASDSLP Trigger: GGGTAGAGAATCAGAGGCTTGTAGATGTCTTTGCCACTTCCACGGGATCTCTGGGAGCTGGAAACTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000525114.2 ENST00000670262.1 |
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| CDS CAA 72 bp | CTCAGGACCTATGGGCTCTATTGCGTGTCTATGTGTTaGGGGTGTGGCGAGAGGTGTTTATTAGACCTCACG | + |
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Preference number: 6 (lower is better) Translates to: LRTYGLYCVSMC*GCGERCLLDLT Trigger: CGTGAGGTCTAATAAACACCTCTCGCCACACCCCAAACACATAGACACGCAATAGAGCCCATAGGTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525114.2 ENST00000654603.1 ENST00000670250.1 ENST00000670262.1 |
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| CDS CCA 72 bp | AAGCTCAGTTTCCAGCTCCCAGAGATCCCGTGGAAGTaGCAAAGACATCTACAAGCCTCTGATTCTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: KLSFQLPEIPWK*QRHLQASDSLP Trigger: TGGTAGAGAATCAGAGGCTTGTAGATGTCTTTGCCACTTCCACGGGATCTCTGGGAGCTGGAAACTGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654603.1 |
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