Pregenerated sensors for LINC02671 (Homo sapiens)

Ensembl gene IDs: ENSG00000224714

Ensembl transcript IDs: ENST00000425902.2, ENST00000655566.1

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAACACATAACGGCCACTCCTCAATCAGCAGTTCGGATCTGGACTaGTCATCTCCACAGATGACGATTATATATCCTCTAGTTCAGGAT	+
Preference number: 5 (lower is better) Translates to: ITHNGHSSISSSDLD*SSPQMTIIYPLVQD Trigger: ATCCTGAACTAGAGGATATATAATCGTCATCTGTGGAGATGATCAGTCCAGATCCGAACTGCTGATTGAGGAGTGGCCGTTATGTGTTAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 90 bp	TCTCCACAGATGACGATTATATATCCTCTAGTTCAGGATGACAAATaGTCAGGGCTGAGTCTTTGGTCTGGGAAATTTTTGCTTAAGAGG	+
Preference number: 5 (lower is better) Translates to: SPQMTIIYPLVQDDK*SGLSLWSGKFLLKR Trigger: CCTCTTAAGCAAAAATTTCCCAGACCAAAGACTCAGCCCTGATCATTTGTCATCCTGAACTAGAGGATATATAATCGTCATCTGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 90 bp	AACTTTGCATTGTCAACAGATAGTACACTGGTTTTTGTAGGGAGCTaGTATTTAGCAGGGATTTCTTTCATCAACTTACCAGACTGGTTA	+
Preference number: 5 (lower is better) Translates to: NFALSTDSTLVFVGS*YLAGISFINLPDWL Trigger: TAACCAGTCTGGTAAGTTGATGAAAGAAATCCCTGCTAAATATCAGCTCCCTACAAAAACCAGTGTACTATCTGTTGACAATGCAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 90 bp	CTGACATTAGGAAGACTTTTGTTTCATTCATGTCTGTGGAAATCCTaGATAGTGCCTGGGATCTCATTGTACTCAATCATATTTGTTGAA	+
Preference number: 5 (lower is better) Translates to: LTLGRLLFHSCLWKS*IVPGISLYSIIFVE Trigger: TTCAACAAATATGATTGAGTACAATGAGATCCCAGGCACTATTCAGGATTTCCACAGACATGAATGAAACAAAAGTCTTCCTAATGTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425902.2 ENST00000655566.1
CDS CCA 72 bp	CTCACTAGGGAGTGCCAGACAGTGGGTGCAGGTCAGTaGGTGCGCGCACCGTGCACGACCCGAAGCAGGGCG	+
Preference number: 6 (lower is better) Translates to: LTRECQTVGAGQ*VRAPCTTRSRA Trigger: CGCCCTGCTTCGGGTCGTGCACGGTGCGCGCACCCACTGACCTGCACCCACTGTCTGGCACTCCCTAGTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS GCA 72 bp	CGCGCACCGTGCACGACCCGAAGCAGGGCGAGGCATTaGCTCACTTGGGAAGCGCAAGGGGTCAGGGAGTTC	+
Preference number: 6 (lower is better) Translates to: RAPCTTRSRARH*LTWEAQGVREF Trigger: GAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGGTCGTGCACGGTGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS GCA 72 bp	CAGACAGTGGGTGCAGGTCAGTGGGTGCGCGCACCGTaGACGACCCGAAGCAGGGCGAGGCATTGCCTCACT	+
Preference number: 6 (lower is better) Translates to: QTVGAGQWVRAP*TTRSRARHCLT Trigger: AGTGAGGCAATGCCTCGCCCTGCTTCGGGTCGTGCACGGTGCGCGCACCCACTGACCTGCACCCACTGTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS CAA 72 bp	GCGCGCACCGTGCACGACCCGAAGCAGGGCGAGGCATaGCCTCACTTGGGAAGCGCAAGGGGTCAGGGAGTT	+
Preference number: 6 (lower is better) Translates to: ARTVHDPKQGEA*PHLGSARGQGV Trigger: AACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGGTCGTGCACGGTGCGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS CCA 72 bp	GGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTaGGTGCAGGTCAGTGGGTGCGCGCACCGTGCACGA	+
Preference number: 6 (lower is better) Translates to: GTGFISLGSARQ*VQVSGCAHRAR Trigger: TCGTGCACGGTGCGCGCACCCACTGACCTGCACCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS CCA 72 bp	TGCACGACCCGAAGCAGGGCGAGGCATTGCCTCACTTaGGAAGCGCAAGGGGTCAGGGAGTTCCCTGTCCTA	+
Preference number: 6 (lower is better) Translates to: CTTRSRARHCLT*EAQGVREFPVL Trigger: TAGGACAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGGTCGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS GCA 72 bp	TTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTaGCAGACAGTGGGTGCAGGTCAGTGGGTGCGCGCA	+
Preference number: 6 (lower is better) Translates to: FHLRYRVHLTRE*QTVGAGQWVRA Trigger: TGCGCGCACCCACTGACCTGCACCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS CCA 72 bp	GAAAGGGGCAAAAGAAGCCTCAGGTCCATTGTGAACTaGTCCAAGGCTCAAGAAAGCTGCTCAGAATGGATG	+
Preference number: 6 (lower is better) Translates to: ERGKRSLRSIVN*SKAQESCSEWM Trigger: CATCCATTCTGAGCAGCTTTCTTGAGCCTTGGACCAGTTCACAATGGACCTGAGGCTTCTTTTGCCCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655566.1
CDS TCA 72 bp	AAGCAGAAAGGGGCAAAAGAAGCCTCAGGTCCATTGTaGACTGGTCCAAGGCTCAAGAAAGCTGCTCAGAAT	+
Preference number: 6 (lower is better) Translates to: KQKGAKEASGPL*TGPRLKKAAQN Trigger: ATTCTGAGCAGCTTTCTTGAGCCTTGGACCAGTTCACAATGGACCTGAGGCTTCTTTTGCCCCTTTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655566.1
CDS TCA 72 bp	ACTGGTCCAAGGCTCAAGAAAGCTGCTCAGAATGGATaGATTTTTGATTGCACATGCCCCACTTGCACCACA	+
Preference number: 6 (lower is better) Translates to: TGPRLKKAAQNG*IFDCTCPTCTT Trigger: TGTGGTGCAAGTGGGGCATGTGCAATCAAAAATTCATCCATTCTGAGCAGCTTTCTTGAGCCTTGGACCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655566.1
CDS CAA 72 bp	CAAGGCTCAAGAAAGCTGCTCAGAATGGATGAATTTTaGATTGCACATGCCCCACTTGCACCACAGCTAAGG	+
Preference number: 6 (lower is better) Translates to: QGSRKLLRMDEF*IAHAPLAPQLR Trigger: CCTTAGCTGTGGTGCAAGTGGGGCATGTGCAATCAAAAATTCATCCATTCTGAGCAGCTTTCTTGAGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655566.1
CDS TCA 72 bp	AACGGCCACTCCTCAATCAGCAGTTCGGATCTGGACTaGTCATCTCCACAGATGACGATTATATATCCTCTA	+
Preference number: 6 (lower is better) Translates to: NGHSSISSSDLD*SSPQMTIIYPL Trigger: TAGAGGATATATAATCGTCATCTGTGGAGATGATCAGTCCAGATCCGAACTGCTGATTGAGGAGTGGCCGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 72 bp	CATGTTGGTTTGTTTAGAGATGAGCTCTGCAAAGTCTaGATGCTGTTGCACATTTGCTGCCCCACTAAAAAG	+
Preference number: 6 (lower is better) Translates to: HVGLFRDELCKV*MLLHICCPTKK Trigger: CTTTTTAGTGGGGCAGCAAATGTGCAACAGCATTCAGACTTTGCAGAGCTCATCTCTAAACAAACCAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 72 bp	GGAAGACTTTTGTTTCATTCATGTCTGTGGAAATCCTaGATAGTGCCTGGGATCTCATTGTACTCAATCATA	+
Preference number: 6 (lower is better) Translates to: GRLLFHSCLWKS*IVPGISLYSII Trigger: TATGATTGAGTACAATGAGATCCCAGGCACTATTCAGGATTTCCACAGACATGAATGAAACAAAAGTCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425902.2 ENST00000655566.1
CDS TCA 72 bp	ATGACGATTATATATCCTCTAGTTCAGGATGACAAATaGTCAGGGCTGAGTCTTTGGTCTGGGAAATTTTTG	+
Preference number: 6 (lower is better) Translates to: MTIIYPLVQDDK*SGLSLWSGKFL Trigger: CAAAAATTTCCCAGACCAAAGACTCAGCCCTGATCATTTGTCATCCTGAACTAGAGGATATATAATCGTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS TCA 72 bp	TTGTCAACAGATAGTACACTGGTTTTTGTAGGGAGCTaGTATTTAGCAGGGATTTCTTTCATCAACTTACCA	+
Preference number: 6 (lower is better) Translates to: LSTDSTLVFVGS*YLAGISFINLP Trigger: TGGTAAGTTGATGAAAGAAATCCCTGCTAAATATCAGCTCCCTACAAAAACCAGTGTACTATCTGTTGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425902.2
CDS CAA 72 bp	TCTTATTGTGGTACTTTTAATGAACTTAACTTTGCATaGTCAACAGATAGTACACTGGTTTTTGTAGGGAGC	+
Preference number: 6 (lower is better) Translates to: SYCGTFNELNFA*STDSTLVFVGS Trigger: GCTCCCTACAAAAACCAGTGTACTATCTGTTGACAATGCAAAGTTAAGTTCATTAAAAGTACCACAATAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425902.2

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