Pregenerated sensors for LINC02667 (Homo sapiens)
Ensembl gene IDs: ENSG00000224190Ensembl transcript IDs: ENST00000446589.1, ENST00000656262.1, ENST00000661127.1, ENST00000667048.1, ENST00000667516.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCCCGGCGGCGGTAAAGCCCAGAAGAGCTGCAGCCGCTTCCGATaGAAAGCAAACCAGGGGAGAGCGTCCCACAGCGGCCCTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GPGGGKAQKSCSRFR*KANQGRASHSGPGF Trigger: AAAGCCAGGGCCGCTGTGGGACGCTCTCCCCTGGTTTGCTTTTCATCGGAAGCGGCTGCAGCTCTTCTGGGCTTTACCGCCGCCGGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 90 bp | CAGGGACAGGCTCCACAGCCACTGTGTGACCAGGGCCCAGGTGCCTaGCACGGCCCCCAAACAGCTGAGCTACAAAGCGTGTCTCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: QGQAPQPLCDQGPGA*HGPQTAELQSVSLK Trigger: TTTCAGAGACACGCTTTGTAGCTCAGCTGTTTGGGGGCCGTGGCAGGCACCTGGGCCCTGGTCACACAGTGGCTGTGGAGCCTGTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | CCAGCCCAGAAACACCTCCAGGTGGGGATGATGACGCCACCAAGCTaGTCATCTGTAGAAGCCTCCCCACATCCTGAGGCTCTGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: PAQKHLQVGMMTPPS*SSVEASPHPEALSG Trigger: TCCGCTCAGAGCCTCAGGATGTGGGGAGGCTTCTACAGATGACCAGCTTGGTGGCGTCATCATCCCCACCTGGAGGTGTTTCTGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS TCA 90 bp | GTCCCACAGCGGCCCTGGCTTTGGAAACAGCCACAGCACAGAAGATaGCAGCCGCCTCTGGGCTTTCACAGCTTGGGGGAATTGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: VPQRPWLWKQPQHRR*QPPLGFHSLGELED Trigger: GTCTTCCAATTCCCCCAAGCTGTGAAAGCCCAGAGGCGGCTGTCATCTTCTGTGCTGTGGCTGTTTCCAAAGCCAGGGCCGCTGTGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | GATAAGGTCTCCTTCCTCCAGGTGGGGATGATGACGCCACCAAGCTaGTCATCTGTAGAAGCCTCCCCACATCCTGAGGCTCTGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: DKVSFLQVGMMTPPS*SSVEASPHPEALSG Trigger: TCCGCTCAGAGCCTCAGGATGTGGGGAGGCTTCTACAGATGACCAGCTTGGTGGCGTCATCATCCCCACCTGGAGGAAGGAGACCTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS GCA 90 bp | AGGAGCCCTTCCTGGAGAGAGGAGACGCGTGCATTCTTCTTTGCTTaGCCGGTGTGTTCAAGGTGCCCCGTACCTCTTTTTCCTAGGACT | + |
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Preference number: 5 (lower is better) Translates to: RSPSWREETRAFFFA*PVCSRCPVPLFPRT Trigger: AGTCCTAGGAAAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTCTCTCCAGGAAGGGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | CTGTCCTCCTCCTTCCTAATTTGTTTTATCCTCACAGTCACCTTCTaGGGACAGCCTGAACTTCCCCAGCACCCTCCAGCCTTCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LSSSFLICFILTVTF*GQPELPQHPPAFRL Trigger: CAGGCGGAAGGCTGGAGGGTGCTGGGGAAGTTCAGGCTGTCCCCAGAAGGTGACTGTGAGGATAAAACAAATTAGGAAGGAGGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CCA 90 bp | ACTAGGACCCAGAAAACCTACTTGGTCTGGAGCATGAAGCATGGTTaGGTGGGTAACCAGGAAGGAATCTCTCCTTGCTCCCCTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRTQKTYLVWSMKHG*VGNQEGISPCSPVA Trigger: GGCCACAGGGGAGCAAGGAGAGATTCCTTCCTGGTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | CCTGGCTTTGGAAACAGCCACAGCACAGAAGATGACAGCCGCCTCTaGGCTTTCACAGCTTGGGGGAATTGGAAGACTTTACTAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: PGFGNSHSTEDDSRL*AFTAWGNWKTLLGP Trigger: GGGTCCTAGTAAAGTCTTCCAATTCCCCCAAGCTGTGAAAGCCCAGAGGCGGCTGTCATCTTCTGTGCTGTGGCTGTTTCCAAAGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS TCA 90 bp | GCCCCGTACCTCTTTTTCCTAGGACTCCATGCCAACGAAGAATGCTaGCTTGCTGCCAAGGCCCACAGGAACATTCTCCACCAGGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: APYLFFLGLHANEEC*LAAKAHRNILHQVE Trigger: TTCAACCTGGTGGAGAATGTTCCTGTGGGCCTTGGCAGCAAGTCAGCATTCTTCGTTGGCATGGAGTCCTAGGAAAAAGAGGTACGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 90 bp | GAGGAGACGCGTGCATTCTTCTTTGCTTGCCCGGTGTGTTCAAGGTaGCCCGTACCTCTTTTTCCTAGGACTCCATGCCAACGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: EETRAFFFACPVCSR*PVPLFPRTPCQRRM Trigger: CATTCTTCGTTGGCATGGAGTCCTAGGAAAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | ACTGTTTATTGGGGTGATATGCGACTGGCTTCAGGGTGGAGAGCCTaGAGAGTGGAGAAAGGCTGTGCTAGAACTCAGAATCCTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: TVYWGDMRLASGWRA*RVEKGCARTQNPEV Trigger: GACCTCAGGATTCTGAGTTCTAGCACAGCCTTTCTCCACTCTCCAGGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | ACAGAAGATGACAGCCGCCTCTGGGCTTTCACAGCTTGGGGGAATTaGAAGACTTTACTAGGACCCAGAAAACCTACTTGGTCTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: TEDDSRLWAFTAWGN*KTLLGPRKPTWSGA Trigger: TGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCAATTCCCCCAAGCTGTGAAAGCCCAGAGGCGGCTGTCATCTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | GGCGTTGTAACTGTTTATTGGGGTGATATGCGACTGGCTTCAGGGTaGAGAGCCTGGAGAGTGGAGAAAGGCTGTGCTAGAACTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: GVVTVYWGDMRLASG*RAWRVEKGCARTQN Trigger: ATTCTGAGTTCTAGCACAGCCTTTCTCCACTCTCCAGGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGTTACAACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS TCA 90 bp | TTTGGGATCCTGTGTTGGCAGAGGCGTTGTAACTGTTTATTGGGGTaGTATGCGACTGGCTTCAGGGTGGAGAGCCTCTTTTTCCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: FGILCWQRRCNCLLG*YATGFRVESLFFLG Trigger: TCCTAGGAAAAAGAGGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGTTACAACGCCTCTGCCAACACAGGATCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS GCA 90 bp | GGCCAACTTGAACCCCGACAACTTCATAAGAGTTTCTTACAGACATaGCTCTTGGTTCCAGATAAGGTCTCCTTCCTCCAGGTGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: GQLEPRQLHKSFLQT*LLVPDKVSFLQVGM Trigger: CATCCCCACCTGGAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAGTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS CCA 90 bp | AGCAATTTGGGATCCTGTGTTGGCAGAGGCGTTGTAACTGTTTATTaGGGTGATATGCGACTGGCTTCAGGGTGGAGAGCCTCTTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SNLGSCVGRGVVTVY*GDMRLASGWRASFS Trigger: GGAAAAAGAGGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGTTACAACGCCTCTGCCAACACAGGATCCCAAATTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667048.1 |
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| CDS TCA 90 bp | TGGAAGACTTTACTAGGACCCAGAAAACCTACTTGGTCTGGAGCATaGAGCATGGTTGGGTGGGTAACCAGGAAGGAATCTCTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: WKTLLGPRKPTWSGA*SMVGWVTRKESLLA Trigger: AGCAAGGAGAGATTCCTTCCTGGTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 90 bp | GGGGAATTGGAAGACTTTACTAGGACCCAGAAAACCTACTTGGTCTaGAGCATGAAGCATGGTTGGGTGGGTAACCAGGAAGGAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: GELEDFTRTQKTYLV*SMKHGWVGNQEGIS Trigger: AGAGATTCCTTCCTGGTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCAATTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 90 bp | TGTGCTAGAACTCAGAATCCTGAGGTCAGGTTCCAGGTGCTAAGTTaGATGGCAAATGTGCCTCATTCATGTTTCTCTAACCTCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: CARTQNPEVRFQVLS*MANVPHSCFSNLHF Trigger: GAAATGGAGGTTAGAGAAACATGAATGAGGCACATTTGCCATGCAACTTAGCACCTGGAACCTGACCTCAGGATTCTGAGTTCTAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 90 bp | GGCCAACTTGAACCCCGACAACTTCATAAGAGTTTCTTACAGACATaGCTCTTGGTTCCAGATAAGGTCTCCTTCCTACTGGAAATATTT | + |
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Preference number: 5 (lower is better) Translates to: GQLEPRQLHKSFLQT*LLVPDKVSFLLEIF Trigger: AAATATTTCCAGTAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAGTTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS TCA 72 bp | GGCGGTAAAGCCCAGAAGAGCTGCAGCCGCTTCCGATaGAAAGCAAACCAGGGGAGAGCGTCCCACAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GGKAQKSCSRFR*KANQGRASHSG Trigger: GCCGCTGTGGGACGCTCTCCCCTGGTTTGCTTTTCATCGGAAGCGGCTGCAGCTCTTCTGGGCTTTACCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 72 bp | CCCTTCCTGGAGAGAGGAGACGCGTGCATTCTTCTTTaGTTGCCCGGTGTGTTCAAGGTGCCCCGTACCTCT | + |
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Preference number: 6 (lower is better) Translates to: PFLERGDACILL*LPGVFKVPRTS Trigger: AGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTCTCTCCAGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | TCCTTCCTCCAGGTGGGGATGATGACGCCACCAAGCTaGTCATCTGTAGAAGCCTCCCCACATCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFLQVGMMTPPS*SSVEASPHPEA Trigger: AGCCTCAGGATGTGGGGAGGCTTCTACAGATGACCAGCTTGGTGGCGTCATCATCCCCACCTGGAGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS GCA 72 bp | CTGTGGCCTGCCGGGGAGGCTCCCCATATGGATAAATaGACCCAGAAACCTTCTCAGGAGAGGAGCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LWPAGEAPHMDK*TQKPSQERSCK Trigger: CTTACAGCTCCTCTCCTGAGAAGGTTTCTGGGTGCATTTATCCATATGGGGAGCCTCCCCGGCAGGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | AAACACCTCCAGGTGGGGATGATGACGCCACCAAGCTaGTCATCTGTAGAAGCCTCCCCACATCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KHLQVGMMTPPS*SSVEASPHPEA Trigger: AGCCTCAGGATGTGGGGAGGCTTCTACAGATGACCAGCTTGGTGGCGTCATCATCCCCACCTGGAGGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CAA 90 bp | CTGAAAGGAGCCCTTCCTGGAGAGAGGAGACGCGTGCATTCTTCTTaGCTTGCCCGGTGTGTTCAAGGTGCCCCGTACCTCTTTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LKGALPGERRRVHSS*LARCVQGAPYLFFL Trigger: TAGGAAAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTCTCTCCAGGAAGGGCTCCTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS TCA 72 bp | CCTGCTGCTCCGGGAGATGACATGTGTAGTCCAGCATaGAGGTCGTATAAGTTGACTTCTGGGGACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PAAPGDDMCSPA*RSYKLTSGDSL Trigger: CAGGCTGTCCCCAGAAGTCAACTTATACGACCTTCATGCTGGACTACACATGTCATCTCCCGGAGCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000656262.1 |
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| CDS GCA 72 bp | TCCTGGAGAGAGGAGACGCGTGCATTCTTCTTTGCTTaGCCGGTGTGTTCAAGGTGCCCCGTACCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SWREETRAFFFA*PVCSRCPVPLF Trigger: AAAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTCTCTCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | GGATCCTGTGTTGGCAGAGGCGTTGTAACTGTTTATTaGGGTGATATGCGACTGGCTTCAGGGTGGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSCVGRGVVTVY*GDMRLASGWRA Trigger: GGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGTTACAACGCCTCTGCCAACACAGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CAA 72 bp | TTGCTGCCAAGGCCCACAGGAACATTCTCCACCAGGTaGAACAACAGGAAGGCCAACTTGAACCCCGACAAC | + |
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Preference number: 6 (lower is better) Translates to: LLPRPTGTFSTR*NNRKANLNPDN Trigger: GTTGTCGGGGTTCAAGTTGGCCTTCCTGTTGTTCAACCTGGTGGAGAATGTTCCTGTGGGCCTTGGCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CAA 72 bp | TTCCTGGAGAGAGGAGACGCGTGCATTCTTCTTTGCTaGCCCGGTGTGTTCAAGGTGCCCCGTACCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: FLERGDACILLC*PGVFKVPRTSF Trigger: AAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACGCGTCTCCTCTCTCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS TCA 72 bp | CCTGCTGCTCCGGGAGATGACATGTGTAGTCCAGCATaGAGGTCGTATAAGTTGACTGTCAGGGAGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PAAPGDDMCSPA*RSYKLTVREQN Trigger: GTTCTGCTCCCTGACAGTCAACTTATACGACCTTCATGCTGGACTACACATGTCATCTCCCGGAGCAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS GCA 72 bp | TTTCCTAGGACTCCATGCCAACGAAGAATGCTGACTTaGTGCCAAGGCCCACAGGAACATTCTCCACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: FPRTPCQRRMLT*CQGPQEHSPPG Trigger: ACCTGGTGGAGAATGTTCCTGTGGGCCTTGGCAGCAAGTCAGCATTCTTCGTTGGCATGGAGTCCTAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS GCA 72 bp | CGTGCATTCTTCTTTGCTTGCCCGGTGTGTTCAAGGTaGCCCGTACCTCTTTTTCCTAGGACTCCATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RAFFFACPVCSR*PVPLFPRTPCQ Trigger: TTGGCATGGAGTCCTAGGAAAAAGAGGTACGGGGCACCTTGAACACACCGGGCAAGCAAAGAAGAATGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | AGCCTGAACTTCCCCAGCACCCTCCAGCCTTCCGCCTaGCTTTTAAGACTCTCAGTATTTAGGTTGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLNFPSTLQPSA*LLRLSVFRLEH Trigger: ATGCTCCAACCTAAATACTGAGAGTCTTAAAAGCCAGGCGGAAGGCTGGAGGGTGCTGGGGAAGTTCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CCA 72 bp | TCCTTCCTAATTTGTTTTATCCTCACAGTCACCTTCTaGGGACAGCCTGAACTTCCCCAGCACCCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SFLICFILTVTF*GQPELPQHPPA Trigger: GGCTGGAGGGTGCTGGGGAAGTTCAGGCTGTCCCCAGAAGGTGACTGTGAGGATAAAACAAATTAGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CCA 72 bp | GACAGCCGCCTCTGGGCTTTCACAGCTTGGGGGAATTaGAAGACTTTACTAGGACCCAGAAAACCTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: DSRLWAFTAWGN*KTLLGPRKPTW Trigger: CCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCAATTCCCCCAAGCTGTGAAAGCCCAGAGGCGGCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | ACTGTTTATTGGGGTGATATGCGACTGGCTTCAGGGTaGAGAGCCTGGAGAGTGGAGAAAGGCTGTGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: TVYWGDMRLASG*RAWRVEKGCAR Trigger: TCTAGCACAGCCTTTCTCCACTCTCCAGGCTCTCCACCCTGAAGCCAGTCGCATATCACCCCAATAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS TCA 72 bp | CTCTTTTTCCTAGGACTCCATGCCAACGAAGAATGCTaGCTTGCTGCCAAGGCCCACAGGAACATTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LFFLGLHANEEC*LAAKAHRNILH Trigger: GTGGAGAATGTTCCTGTGGGCCTTGGCAGCAAGTCAGCATTCTTCGTTGGCATGGAGTCCTAGGAAAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CCA 72 bp | TGGAGATTGTTCCTTAGACAGGAACTTGGCATGTCTTaGGGTGTGTCTCTGTTCCAGCCCAGAAACACCTCC | + |
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Preference number: 6 (lower is better) Translates to: WRLFLRQELGMS*GVSLFQPRNTS Trigger: GGAGGTGTTTCTGGGCTGGAACAGAGACACACCCCAAGACATGCCAAGTTCCTGTCTAAGGAACAATCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CAA 72 bp | TGCCAAGGAACTGGAGATTGTTCCTTAGACAGGAACTaGGCATGTCTTGGGGTGTGTCTCTGTTCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CQGTGDCSLDRN*ACLGVCLCSSP Trigger: TGGGCTGGAACAGAGACACACCCCAAGACATGCCAAGTTCCTGTCTAAGGAACAATCTCCAGTTCCTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CAA 90 bp | AATGCTGACTTGCTGCCAAGGCCCACAGGAACATTCTCCACCAGGTaGAACAACAGGAAGGCCAACTTGAACCCCGACAACTTCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: NADLLPRPTGTFSTR*NNRKANLNPDNFIR Trigger: TCTTATGAAGTTGTCGGGGTTCAAGTTGGCCTTCCTGTTGTTCAACCTGGTGGAGAATGTTCCTGTGGGCCTTGGCAGCAAGTCAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CAA 90 bp | AGCTTGGGGGAATTGGAAGACTTTACTAGGACCCAGAAAACCTACTaGGTCTGGAGCATGAAGCATGGTTGGGTGGGTAACCAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGELEDFTRTQKTY*VWSMKHGWVGNQEG Trigger: TCCTTCCTGGTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCAATTCCCCCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CCA 72 bp | ACAGAAGATGACAGCCGCCTCTGGGCTTTCACAGCTTaGGGGAATTGGAAGACTTTACTAGGACCCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: TEDDSRLWAFTA*GNWKTLLGPRK Trigger: TTTTCTGGGTCCTAGTAAAGTCTTCCAATTCCCCCAAGCTGTGAAAGCCCAGAGGCGGCTGTCATCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CAA 90 bp | CTTGAACCCCGACAACTTCATAAGAGTTTCTTACAGACATGCCTCTaGGTTCCAGATAAGGTCTCCTTCCTCCAGGTGGGGATGATGACG | + |
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Preference number: 6 (lower is better) Translates to: LEPRQLHKSFLQTCL*VPDKVSFLQVGMMT Trigger: CGTCATCATCCCCACCTGGAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS CAA 90 bp | TTAGCAATCTGCCAAGGAACTGGAGATTGTTCCTTAGACAGGAACTaGGCATGTCTTGGGGTGTGTCTCTGTTCCAGCCCAGAAACACCT | + |
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Preference number: 6 (lower is better) Translates to: LAICQGTGDCSLDRN*ACLGVCLCSSPETP Trigger: AGGTGTTTCTGGGCTGGAACAGAGACACACCCCAAGACATGCCAAGTTCCTGTCTAAGGAACAATCTCCAGTTCCTTGGCAGATTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CCA 72 bp | GAAGACTTTACTAGGACCCAGAAAACCTACTTGGTCTaGAGCATGAAGCATGGTTGGGTGGGTAACCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EDFTRTQKTYLV*SMKHGWVGNQE Trigger: TTCCTGGTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CAA 72 bp | CGACAACTTCATAAGAGTTTCTTACAGACATGCCTCTaGGTTCCAGATAAGGTCTCCTTCCTCCAGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RQLHKSFLQTCL*VPDKVSFLQVG Trigger: CCCCACCTGGAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS CAA 90 bp | CCCACAGGAACATTCTCCACCAGGTTGAACAACAGGAAGGCCAACTaGAACCCCGACAACTTCATAAGAGTTTCTTACAGACATGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PTGTFSTRLNNRKAN*NPDNFIRVSYRHAS Trigger: AGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAGTTGGCCTTCCTGTTGTTCAACCTGGTGGAGAATGTTCCTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS GCA 72 bp | GAACCCCGACAACTTCATAAGAGTTTCTTACAGACATaGCTCTTGGTTCCAGATAAGGTCTCCTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EPRQLHKSFLQT*LLVPDKVSFLQ Trigger: CTGGAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446589.1 ENST00000667516.1 |
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| CDS CAA 72 bp | GAATTGGAAGACTTTACTAGGACCCAGAAAACCTACTaGGTCTGGAGCATGAAGCATGGTTGGGTGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: ELEDFTRTQKTY*VWSMKHGWVGN Trigger: GTTACCCACCCAACCATGCTTCATGCTCCAGACCAAGTAGGTTTTCTGGGTCCTAGTAAAGTCTTCCAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS GCA 72 bp | GAACCCCGACAACTTCATAAGAGTTTCTTACAGACATaGCTCTTGGTTCCAGATAAGGTCTCCTTCCTACTG | + |
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Preference number: 6 (lower is better) Translates to: EPRQLHKSFLQT*LLVPDKVSFLL Trigger: CAGTAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS GCA 72 bp | ACTCAGAATCCTGAGGTCAGGTTCCAGGTGCTAAGTTaGATGGCAAATGTGCCTCATTCATGTTTCTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: TQNPEVRFQVLS*MANVPHSCFSN Trigger: GTTAGAGAAACATGAATGAGGCACATTTGCCATGCAACTTAGCACCTGGAACCTGACCTCAGGATTCTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661127.1 |
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| CDS CAA 72 bp | ACATTCTCCACCAGGTTGAACAACAGGAAGGCCAACTaGAACCCCGACAACTTCATAAGAGTTTCTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: TFSTRLNNRKAN*NPDNFIRVSYR Trigger: TCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAGTTGGCCTTCCTGTTGTTCAACCTGGTGGAGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000446589.1 ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 ENST00000667516.1 |
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| CDS CAA 72 bp | CGACAACTTCATAAGAGTTTCTTACAGACATGCCTCTaGGTTCCAGATAAGGTCTCCTTCCTACTGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: RQLHKSFLQTCL*VPDKVSFLLEI Trigger: TATTTCCAGTAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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| CDS CAA 90 bp | CTTGAACCCCGACAACTTCATAAGAGTTTCTTACAGACATGCCTCTaGGTTCCAGATAAGGTCTCCTTCCTACTGGAAATATTTATTAGC | + |
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Preference number: 6 (lower is better) Translates to: LEPRQLHKSFLQTCL*VPDKVSFLLEIFIS Trigger: GCTAATAAATATTTCCAGTAGGAAGGAGACCTTATCTGGAACCAAGAGGCATGTCTGTAAGAAACTCTTATGAAGTTGTCGGGGTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656262.1 ENST00000661127.1 ENST00000667048.1 |
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