RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02665 (Homo sapiens)

Ensembl gene IDs: ENSG00000223581

Ensembl transcript IDs: ENST00000420049.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GTGGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTGCTaGGAGATTGGAAGTTCTCCACTACATGGCCTCTGGGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VVHFPGGCTVPQVVC*EIGSSPLHGLWASA
Trigger: AGCACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS GCA 90 bp TGTGTGGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTaGTGGGAGATTGGAAGTTCTCCACTACATGGCCTCTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: CVVHFPGGCTVPQVV*WEIGSSPLHGLWAS
Trigger: ACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 90 bp CTGTGTGTGTGGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGGTaGTGTGCTGGGAGATTGGAAGTTCTCCACTACATGGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LCVWFTFQEDAPSPR*CAGRLEVLHYMASG
Trigger: CCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS GCA 90 bp CCTGTTTCCAGTGGAGCTGTGTGTGTGGTTCACTTTCCAGGAGGATaGACCGTCCCCCAGGTGGTGTGCTGGGAGATTGGAAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PVSSGAVCVVHFPGG*TVPQVVCWEIGSSP
Trigger: TGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAGCTCCACTGGAAACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 90 bp CTCATGTTTGGCGGAAGTCTCCTGTTTCCAGTGGAGCTGTGTGTGTaGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LMFGGSLLFPVELCV*FTFQEDAPSPRWCA
Trigger: AGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAGCTCCACTGGAAACAGGAGACTTCCGCCAAACATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 90 bp TCCAGGCCCCTTGTCTCATGTTTGGCGGAAGTCTCCTGTTTCCAGTaGAGCTGTGTGTGTGGTTCACTTTCCAGGAGGATGCACCGTCCC +
Preference number: 5 (lower is better)
Translates to: SRPLVSCLAEVSCFQ*SCVCGSLSRRMHRP
Trigger: GGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAGCTCCACTGGAAACAGGAGACTTCCGCCAAACATGAGACAAGGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 90 bp CAGGTGGTGTGCTGGGAGATTGGAAGTTCTCCACTACATGGCCTCTaGGCCAGTGCTATTAGCCCCACTTATCTCTTTTCCAGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QVVCWEIGSSPLHGL*ASAISPTYLFSRAS
Trigger: GGAGGCTCTGGAAAAGAGATAAGTGGGGCTAATAGCACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS TCA 90 bp AGAAGAGAAAGCAGAATGTTAGCGGAGCACCTAATAGGACACAACTaGAATATTCCAGGCCCCTTGTCTCATGTTTGGCGGAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RRESRMLAEHLIGHN*NIPGPLSHVWRKSP
Trigger: AGGAGACTTCCGCCAAACATGAGACAAGGGGCCTGGAATATTTCAGTTGTGTCCTATTAGGTGCTCCGCTAACATTCTGCTTTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp AGGATGCACCGTCCCCCAGGTGGTGTGCTGGGAGATTaGAAGTTCTCCACTACATGGCCTCTGGGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: RMHRPPGGVLGD*KFSTTWPLGQC
Trigger: GCACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CAA 72 bp GAGGATGCACCGTCCCCCAGGTGGTGTGCTGGGAGATaGGAAGTTCTCCACTACATGGCCTCTGGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: EDAPSPRWCAGR*EVLHYMASGPV
Trigger: CACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp GGCGGAAGTCTCCTGTTTCCAGTGGAGCTGTGTGTGTaGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GGSLLFPVELCV*FTFQEDAPSPR
Trigger: CCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAGCTCCACTGGAAACAGGAGACTTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CAA 90 bp ACTTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTGCTGGGAGATaGGAAGTTCTCCACTACATGGCCTCTGGGCCAGTGCTATTAGCC +
Preference number: 6 (lower is better)
Translates to: TFQEDAPSPRWCAGR*EVLHYMASGPVLLA
Trigger: GGCTAATAGCACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS GCA 72 bp CACTTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTaGTGGGAGATTGGAAGTTCTCCACTACATGGCCTC +
Preference number: 6 (lower is better)
Translates to: HFPGGCTVPQVV*WEIGSSPLHGL
Trigger: GAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS GCA 72 bp AGTGGAGCTGTGTGTGTGGTTCACTTTCCAGGAGGATaGACCGTCCCCCAGGTGGTGTGCTGGGAGATTGGA +
Preference number: 6 (lower is better)
Translates to: SGAVCVVHFPGG*TVPQVVCWEIG
Trigger: TCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCACACACACAGCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp TTTCCAGGAGGATGCACCGTCCCCCAGGTGGTGTGCTaGGAGATTGGAAGTTCTCCACTACATGGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: FPGGCTVPQVVC*EIGSSPLHGLW
Trigger: CCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp TGGTTCACTTTCCAGGAGGATGCACCGTCCCCCAGGTaGTGTGCTGGGAGATTGGAAGTTCTCCACTACATG +
Preference number: 6 (lower is better)
Translates to: WFTFQEDAPSPR*CAGRLEVLHYM
Trigger: CATGTAGTGGAGAACTTCCAATCTCCCAGCACACCACCTGGGGGACGGTGCATCCTCCTGGAAAGTGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS TCA 72 bp CAGAAGCTTTGGATAATCTGGTTCCCCCTTCAGAGGTaGCTCTGCAGGAACGCGCAGACTGAAGGCATAAGA +
Preference number: 6 (lower is better)
Translates to: QKLWIIWFPLQR*LCRNAQTEGIR
Trigger: TCTTATGCCTTCAGTCTGCGCGTTCCTGCAGAGTCACCTCTGAAGGGGGAACCAGATTATCCAAAGCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp TGCTGGGAGATTGGAAGTTCTCCACTACATGGCCTCTaGGCCAGTGCTATTAGCCCCACTTATCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: CWEIGSSPLHGL*ASAISPTYLFS
Trigger: GGAAAAGAGATAAGTGGGGCTAATAGCACTGGCCCAGAGGCCATGTAGTGGAGAACTTCCAATCTCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS TCA 72 bp AGCAGAATGTTAGCGGAGCACCTAATAGGACACAACTaGAATATTCCAGGCCCCTTGTCTCATGTTTGGCGG +
Preference number: 6 (lower is better)
Translates to: SRMLAEHLIGHN*NIPGPLSHVWR
Trigger: CCGCCAAACATGAGACAAGGGGCCTGGAATATTTCAGTTGTGTCCTATTAGGTGCTCCGCTAACATTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420049.2
CDS CCA 72 bp GGCATTTTTATTGTCCATCCGTACGTGGTACAGCACTaGAGAAAGGTAGTCAATACGTGGGAAGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GIFIVHPYVVQH*RKVVNTWEEPP
Trigger: AGGAGGCTCTTCCCACGTATTGACTACCTTTCTCCAGTGCTGTACCACGTACGGATGGACAATAAAAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420049.2