Pregenerated sensors for LINC02664 (Homo sapiens)
Ensembl gene IDs: ENSG00000272381Ensembl transcript IDs: ENST00000605929.1, ENST00000662544.1, ENST00000669722.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACCCACGTTCCGCGGCAGGCATCCTCCACCTGCCCCCTCAGCCTTTaGGCCAGAGCACATCACTCATCCAGTGAGAGAGGTGGCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: THVPRQASSTCPLSL*ARAHHSSSERGGQP Trigger: GGGCTGGCCACCTCTCTCACTGGATGAGTGATGTGCTCTGGCTCAAAGGCTGAGGGGGCAGGTGGAGGATGCCTGCCGCGGAACGTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS TCA 90 bp | GGGCTGCAGGTGACGGCCGCAGATCCTCTCCCAGTGAGAAGATTCTaGTGGAGGGAGCACCCACGTTCCGCGGCAGGCATCCTCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: GLQVTAADPLPVRRF*WREHPRSAAGILHL Trigger: CAGGTGGAGGATGCCTGCCGCGGAACGTGGGTGCTCCCTCCATCAGAATCTTCTCACTGGGAGAGGATCTGCGGCCGTCACCTGCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS CCA 90 bp | AAGGGTCGGCTCTGCTTCTGCAAACATCCGGCCCTTCCCCTCCTCTaGCCTGTGCTCAGAATTCAGAAGCAGCTGTGGGGGCACGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: KGRLCFCKHPALPLL*PVLRIQKQLWGHAA Trigger: AGCCGCGTGCCCCCACAGCTGCTTCTGAATTCTGAGCACAGGCCAGAGGAGGGGAAGGGCCGGATGTTTGCAGAAGCAGAGCCGACCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS CCA 90 bp | GCCCTTCCCCTCCTCTGGCCTGTGCTCAGAATTCAGAAGCAGCTGTaGGGGCACGCGGCTGTGCCCTTTAGCCCATGGTCACAGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ALPLLWPVLRIQKQL*GHAAVPFSPWSQEK Trigger: TTTCTCCTGTGACCATGGGCTAAAGGGCACAGCCGCGTGCCCCCACAGCTGCTTCTGAATTCTGAGCACAGGCCAGAGGAGGGGAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS CCA 90 bp | ATTCAGAAGCAGCTGTGGGGGCACGCGGCTGTGCCCTTTAGCCCATaGTCACAGGAGAAATGGCCTCAGCAGAAAGACTCCAGAAATGAC | + |
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Preference number: 5 (lower is better) Translates to: IQKQLWGHAAVPFSP*SQEKWPQQKDSRND Trigger: GTCATTTCTGGAGTCTTTCTGCTGAGGCCATTTCTCCTGTGACCATGGGCTAAAGGGCACAGCCGCGTGCCCCCACAGCTGCTTCTGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS GCA 90 bp | ATGTTTTTGCCCTGCCATATCCTTAACCTACCTTTGACTAAACCTTaGTCAAAGCAACTCCACTGGGATACCAAGGCCACCCAGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: MFLPCHILNLPLTKP*SKQLHWDTKATQSS Trigger: GGAAGACTGGGTGGCCTTGGTATCCCAGTGGAGTTGCTTTGAGCAAGGTTTAGTCAAAGGTAGGTTAAGGATATGGCAGGGCAAAAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 90 bp | GGTGTTGTAGAAAGGAGAAGGAGTAGTAGGAGGGAATTCGGTGTTTaGGTCAAAGTAAATAAGAGACTGCTGCAGCAGGGGTTGGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GVVERRRSSRREFGV*VKVNKRLLQQGLGK Trigger: TTTCCCCAACCCCTGCTGCAGCAGTCTCTTATTTACTTTGACTCAAACACCGAATTCCCTCCTACTACTCCTTCTCCTTTCTACAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS GCA 90 bp | CTGGAATTTCCAAAGACAAACTCTGGCTTCCTGATGTTTTTGCCCTaGCATATCCTTAACCTACCTTTGACTAAACCTTGCTCAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LEFPKTNSGFLMFLP*HILNLPLTKPCSKQ Trigger: TTGCTTTGAGCAAGGTTTAGTCAAAGGTAGGTTAAGGATATGGCAGGGCAAAAACATCAGGAAGCCAGAGTTTGTCTTTGGAAATTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 90 bp | TTGAGACTTAACCAACTAAATAACCATGCCTCTTTACACTGCCTATaGTCCAACAGCCTTATTGGACCTGTCCACGTTCATTCATTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LRLNQLNNHASLHCL*SNSLIGPVHVHSFV Trigger: TACAAATGAATGAACGTGGACAGGTCCAATAAGGCTGTTGGATCATAGGCAGTGTAAAGAGGCATGGTTATTTAGTTGGTTAAGTCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CCA 90 bp | ACTCAAAGTATCCCTTCCATTACAGGAAACAGCCTGGGGAACAGCTaGTTCAAGAGTAATAATAGATTCCAATTGTCAGAAAATGTATAC | + |
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Preference number: 5 (lower is better) Translates to: TQSIPSITGNSLGNS*FKSNNRFQLSENVY Trigger: GTATACATTTTCTGACAATTGGAATCTATTATTACTCTTGAACCAGCTGTTCCCCAGGCTGTTTCCTGTAATGGAAGGGATACTTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS CCA 90 bp | AAAAGATATAAACTCAAAGTATCCCTTCCATTACAGGAAACAGCCTaGGGAACAGCTGGTTCAAGAGTAATAATAGATTCCAATTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: KRYKLKVSLPLQETA*GTAGSRVIIDSNCQ Trigger: CTGACAATTGGAATCTATTATTACTCTTGAACCAGCTGTTCCCCAGGCTGTTTCCTGTAATGGAAGGGATACTTTGAGTTTATATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS TCA 72 bp | GTGACGGCCGCAGATCCTCTCCCAGTGAGAAGATTCTaGTGGAGGGAGCACCCACGTTCCGCGGCAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VTAADPLPVRRF*WREHPRSAAGI Trigger: GATGCCTGCCGCGGAACGTGGGTGCTCCCTCCATCAGAATCTTCTCACTGGGAGAGGATCTGCGGCCGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS CCA 72 bp | CTCCTCTGGCCTGTGCTCAGAATTCAGAAGCAGCTGTaGGGGCACGCGGCTGTGCCCTTTAGCCCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLWPVLRIQKQL*GHAAVPFSPWS Trigger: TGACCATGGGCTAAAGGGCACAGCCGCGTGCCCCCACAGCTGCTTCTGAATTCTGAGCACAGGCCAGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS CCA 72 bp | CTCTGCTTCTGCAAACATCCGGCCCTTCCCCTCCTCTaGCCTGTGCTCAGAATTCAGAAGCAGCTGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LCFCKHPALPLL*PVLRIQKQLWG Trigger: CCCCCACAGCTGCTTCTGAATTCTGAGCACAGGCCAGAGGAGGGGAAGGGCCGGATGTTTGCAGAAGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS GCA 72 bp | TCAGAATTCAGAAGCAGCTGTGGGGGCACGCGGCTGTaGCCTTTAGCCCATGGTCACAGGAGAAATGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SEFRSSCGGTRL*PLAHGHRRNGL Trigger: GAGGCCATTTCTCCTGTGACCATGGGCTAAAGGGCACAGCCGCGTGCCCCCACAGCTGCTTCTGAATTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS CCA 72 bp | GCGGCTGTGCCCTTTAGCCCATGGTCACAGGAGAAATaGCCTCAGCAGAAAGACTCCAGAAATGACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AAVPFSPWSQEK*PQQKDSRNDSH Trigger: ATGGCTGTCATTTCTGGAGTCTTTCTGCTGAGGCCATTTCTCCTGTGACCATGGGCTAAAGGGCACAGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669722.1 |
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| CDS CAA 90 bp | ACTCCACTGGGATACCAAGGCCACCCAGTCTTCCCTAAAGCTCCCTaGACTCCTGCAACAAACACATACTCTTCTTCGGTGGGCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TPLGYQGHPVFPKAP*TPATNTYSSSVGLR Trigger: TCTCAAGCCCACCGAAGAAGAGTATGTGTTTGTTGCAGGAGTCAAGGGAGCTTTAGGGAAGACTGGGTGGCCTTGGTATCCCAGTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 72 bp | GATACCAAGGCCACCCAGTCTTCCCTAAAGCTCCCTTaGCTCCTGCAACAAACACATACTCTTCTTCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: DTKATQSSLKLP*LLQQTHTLLRW Trigger: CCACCGAAGAAGAGTATGTGTTTGTTGCAGGAGTCAAGGGAGCTTTAGGGAAGACTGGGTGGCCTTGGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CAA 72 bp | GGATACCAAGGCCACCCAGTCTTCCCTAAAGCTCCCTaGACTCCTGCAACAAACACATACTCTTCTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GYQGHPVFPKAP*TPATNTYSSSV Trigger: CACCGAAGAAGAGTATGTGTTTGTTGCAGGAGTCAAGGGAGCTTTAGGGAAGACTGGGTGGCCTTGGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CAA 90 bp | GTCAGGTGCCGGAACATAACCCAATCCCTGTCTTTGAGGAGCATATaGACTGGCTGGAAAGACAGACCTCAAGAGTGGCATTTCCGAACT | + |
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Preference number: 6 (lower is better) Translates to: VRCRNITQSLSLRSI*TGWKDRPQEWHFRT Trigger: AGTTCGGAAATGCCACTCTTGAGGTCTGTCTTTCCAGCCAGTCAATATGCTCCTCAAAGACAGGGATTGGGTTATGTTCCGGCACCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS GCA 72 bp | CCCTGCCATATCCTTAACCTACCTTTGACTAAACCTTaGTCAAAGCAACTCCACTGGGATACCAAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: PCHILNLPLTKP*SKQLHWDTKAT Trigger: GGTGGCCTTGGTATCCCAGTGGAGTTGCTTTGAGCAAGGTTTAGTCAAAGGTAGGTTAAGGATATGGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS GCA 72 bp | GCCCATGTTTCAGCGAAGACACACTGTTGGTGGGAGTaGGAATTAGTTCAGCCATTGTTGAAAACAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AHVSAKTHCWWE*ELVQPLLKTVW Trigger: CCACACTGTTTTCAACAATGGCTGAACTAATTCGCACTCCCACCAACAGTGTGTCTTCGCTGAAACATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662544.1 |
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| CDS CAA 72 bp | CGGAACATAACCCAATCCCTGTCTTTGAGGAGCATATaGACTGGCTGGAAAGACAGACCTCAAGAGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RNITQSLSLRSI*TGWKDRPQEWH Trigger: ATGCCACTCTTGAGGTCTGTCTTTCCAGCCAGTCAATATGCTCCTCAAAGACAGGGATTGGGTTATGTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 72 bp | GAAAGGAGAAGGAGTAGTAGGAGGGAATTCGGTGTTTaGGTCAAAGTAAATAAGAGACTGCTGCAGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: ERRRSSRREFGV*VKVNKRLLQQG Trigger: CCCCTGCTGCAGCAGTCTCTTATTTACTTTGACTCAAACACCGAATTCCCTCCTACTACTCCTTCTCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CCA 72 bp | ACGAGTGCCCATGTTTCAGCGAAGACACACTGTTGGTaGGAGTGCGAATTAGTTCAGCCATTGTTGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: TSAHVSAKTHCW*ECELVQPLLKT Trigger: TGTTTTCAACAATGGCTGAACTAATTCGCACTCCCACCAACAGTGTGTCTTCGCTGAAACATGGGCACTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662544.1 |
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| CDS CAA 90 bp | GCTCCCTTGACTCCTGCAACAAACACATACTCTTCTTCGGTGGGCTaGAGACTTAACCAACTAAATAACCATGCCTCTTTACACTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: APLTPATNTYSSSVG*RLNQLNNHASLHCL Trigger: TAGGCAGTGTAAAGAGGCATGGTTATTTAGTTGGTTAAGTCTCAAGCCCACCGAAGAAGAGTATGTGTTTGTTGCAGGAGTCAAGGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS GCA 72 bp | CCAAAGACAAACTCTGGCTTCCTGATGTTTTTGCCCTaGCATATCCTTAACCTACCTTTGACTAAACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PKTNSGFLMFLP*HILNLPLTKPC Trigger: GCAAGGTTTAGTCAAAGGTAGGTTAAGGATATGGCAGGGCAAAAACATCAGGAAGCCAGAGTTTGTCTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CAA 90 bp | GAAAGGCTGGAATTTCCAAAGACAAACTCTGGCTTCCTGATGTTTTaGCCCTGCCATATCCTTAACCTACCTTTGACTAAACCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ERLEFPKTNSGFLMF*PCHILNLPLTKPCS Trigger: TGAGCAAGGTTTAGTCAAAGGTAGGTTAAGGATATGGCAGGGCAAAAACATCAGGAAGCCAGAGTTTGTCTTTGGAAATTCCAGCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 72 bp | AACCAACTAAATAACCATGCCTCTTTACACTGCCTATaGTCCAACAGCCTTATTGGACCTGTCCACGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: NQLNNHASLHCL*SNSLIGPVHVH Trigger: ATGAACGTGGACAGGTCCAATAAGGCTGTTGGATCATAGGCAGTGTAAAGAGGCATGGTTATTTAGTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS TCA 72 bp | TGCGAATTAGTTCAGCCATTGTTGAAAACAGTGTGGTaGTTCCTCAAAGACCTGTTTGGGTCCAAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: CELVQPLLKTVW*FLKDLFGSKCS Trigger: ACTACACTTGGACCCAAACAGGTCTTTGAGGAATCACCACACTGTTTTCAACAATGGCTGAACTAATTCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662544.1 |
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| CDS CAA 72 bp | ATGCCTCTTTACACTGCCTATGATCCAACAGCCTTATaGGACCTGTCCACGTTCATTCATTTGTACTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MPLYTAYDPTAL*DLSTFIHLYCF Trigger: GAAACAGTACAAATGAATGAACGTGGACAGGTCCAATAAGGCTGTTGGATCATAGGCAGTGTAAAGAGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CCA 72 bp | ATCCCTTCCATTACAGGAAACAGCCTGGGGAACAGCTaGTTCAAGAGTAATAATAGATTCCAATTGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: IPSITGNSLGNS*FKSNNRFQLSE Trigger: TTCTGACAATTGGAATCTATTATTACTCTTGAACCAGCTGTTCCCCAGGCTGTTTCCTGTAATGGAAGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000605929.1 ENST00000662544.1 ENST00000669722.1 |
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| CDS CAA 72 bp | ACTCCTGCAACAAACACATACTCTTCTTCGGTGGGCTaGAGACTTAACCAACTAAATAACCATGCCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TPATNTYSSSVG*RLNQLNNHASL Trigger: TAAAGAGGCATGGTTATTTAGTTGGTTAAGTCTCAAGCCCACCGAAGAAGAGTATGTGTTTGTTGCAGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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| CDS CAA 72 bp | GAATTTCCAAAGACAAACTCTGGCTTCCTGATGTTTTaGCCCTGCCATATCCTTAACCTACCTTTGACTAAA | + |
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Preference number: 6 (lower is better) Translates to: EFPKTNSGFLMF*PCHILNLPLTK Trigger: TTTAGTCAAAGGTAGGTTAAGGATATGGCAGGGCAAAAACATCAGGAAGCCAGAGTTTGTCTTTGGAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605929.1 |
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